Basic Information

Insect: Gnoriste bilineata
Gene Symbol: -
Assembly: GCA_026546565.1
Location: JANSWN010004588.1:5986-8452[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.063 3.6 8.4 0.1 1 20 409 428 409 430 0.96

2 9 1.1 61 4.5 1.6 1 21 526 546 526 548 0.85

3 9 3 1.7e+02 3.1 4.0 1 23 552 577 552 577 0.97

4 9 2.6 1.5e+02 3.3 0.4 3 21 585 603 583 604 0.95

5 9 0.0022 0.12 13.0 2.6 2 23 612 633 611 633 0.96

6 9 3.2e-05 0.0019 18.8 1.1 1 23 639 661 639 661 0.98

7 9 1.9e-05 0.0011 19.5 1.2 1 23 667 689 667 689 0.98

8 9 0.00091 0.052 14.2 1.1 1 23 695 717 695 717 0.97

9 9 3.9e-05 0.0022 18.5 6.8 1 23 723 745 723 745 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.063	3.6	8.4	0.1	1	20	409	428	409	430	0.96
2	9	1.1	61	4.5	1.6	1	21	526	546	526	548	0.85
3	9	3	1.7e+02	3.1	4.0	1	23	552	577	552	577	0.97
4	9	2.6	1.5e+02	3.3	0.4	3	21	585	603	583	604	0.95
5	9	0.0022	0.12	13.0	2.6	2	23	612	633	611	633	0.96
6	9	3.2e-05	0.0019	18.8	1.1	1	23	639	661	639	661	0.98
7	9	1.9e-05	0.0011	19.5	1.2	1	23	667	689	667	689	0.98
8	9	0.00091	0.052	14.2	1.1	1	23	695	717	695	717	0.97
9	9	3.9e-05	0.0022	18.5	6.8	1	23	723	745	723	745	0.99

Sequence Information

Coding Sequence: ATGGATCAAAACTACGAGCTAAATATCGATCCGAGTGCAATGTGTCGCGTCTGCTTGATCGAGGGCTGCAATATGAAAACGATATTTTGCAATGAAATCGTCAACGGTGGAATCGTTCCGTTTCCTAAAGTGTTCGAGAGCACCACAAATGTTCAGGTTAAACCAAAAGATGGGTTCCCCGAGAAGCTTTGCACCGCCTGCAGAACAACTATTTGTGACGCATATGTACTAAAACGAAAATACCAACAAAACCAGATGCTGCTCTGCTCTATACTGAACATCATTTTGCCAACAGAAGAAGAGCCACCGGTTGTCGTTGCCACATCGATCACCACAATTTCCACTAAAACGCAAACAGAAAATCCAGTCCACACAGCAGCTGGCACACAAACCAAAGCTGAATTAACTGTAGCAGTTCATACCCAGACCAAGTCGCCAGTGCTTAACACATGCCATACACAAACAACTTCATTGAAGAATATCGAAACGGATCAGTCGTGTGTGTCGAACGATGTCGTGATTACTATCGATGAAACGAAGGAGCGATCATTGTCTGAGAAAAGTTTCGAAATTGAAATTAACGACAGTCAAATGATGAAAGTTGAAACGTTAACAGACGATGACGGACCAGAAGAATTGTTTGAAATTGAAGAGACAGAGCCGGTGTATGAGGCCGAAGAATGCTATGAGTTAAGCACCTCCGAACTAACCGGACAAGACGAAGTCAAAGAGAAAGTGGTTAACATTGGTTGCGATGAAGATGATACCATCACATTGATGTATGACGACGCATTGACAGACATCACCACCACCGTTGAGTATTtgctcgacgaagaagaagaagaagaagaagaaaaagaagaaaatgacgaaaacaatgataatgatgatgatgatgatgatgatgatattgctatgatggatgacatcaaaacggtagcgctaacgtggtggtgTAAATTTTGTATGAATGAATTTGGTACGGAAGAAGAACATGAACAGCATCAGCAGTTATGTGAGGCAAAAATTACAGAACCAAAGCGTTACCGTGTCAAACGTACTTCGCCCAAGTTAGGTCATGGCAGACCCAATGTATCCGAAAAGAATCGAGGTAATTTCTGTGAACTATGCAATCATGTTTTAAAGTTGGGATCTACCAGCTACGCGCAGCATATGGCATGTCACGACCAATCACTACCTATACTCGTTGATTCTGTACACTTCTATCGATGTGGTGGCTGCACAAATATTTACGTCTCTTCGATGCAACTGGAACAGCATTTAACTGAAACTTCAGACGGTTTCTGTGCCAGTGGCAACCAACATGCGAATACAGCCAAATTGAAACCATTCACTAACGTACAATTTCTAGAAGATCCCGATCTCATGAATGTCTGTCAACGTTTATATTCGTGCACAAAGCTACAGGAAAATATGTTCATGTGTGACTGGTGCTCTGAGTTCACGGACGCAACGGTTGCGGGTATCATCAATCATTTCACGAAATTACATTTCGATGATGTTAATGCAGACATAAACGTGCAGCCGGAGCATTGTCACAGTTTCAGTGATCAGCACAAGTGTGGCGTGTGCAATGAACAATTTGCCACGCTACTCGAGACGTTCAAACATGCTTATTTCCACTCAACGATATACAAATGTCCCTACAATCAATGTTCGGATAACTATTCCAAGTTCTATCAGTTACATCAGCATCTCGAACGTAAACACATGGAAGACATTGAATTCGGATGTACACATTGTATGGCTGTTTTTGGAAATTATATCGAATTCCGGTCGCATTTACGTAACGAGTGTCAAGAGCGATCGTTGTCCTGTGATATTTGCAAGAAAAAGTTCTTTTCGAAGAGAACGTTAGACATTCATCGGAAGTATCATTTCAACGATAAGCGCTATAGTTGTACATTCTGTGCAAAACGATTCACACAGAGTGGCGATTTGAAAATGCACGAACGCATCCATACTGGCGATAAACCATACAAATGCACGGTATGCAACAAGGCATTTCGATCGACTGGCAACCGTAAGGATCACATGTCAGTGCACGAAGACGAGAAACGTTATGTGTGTAGCTACTGTTCGTTGCAGTTTAAATCTGAGCGAACACTACGCGGCCATATGACACTGCACACAAACCCAAAGAAGTTCCGATGTGAATTGTGCAGAAAAGAGTTCCATCGTTCCTATCATCTCAAGTCTCATATGCGTGTTCATGAGAACTCTTAG
Protein Sequence: MDQNYELNIDPSAMCRVCLIEGCNMKTIFCNEIVNGGIVPFPKVFESTTNVQVKPKDGFPEKLCTACRTTICDAYVLKRKYQQNQMLLCSILNIILPTEEEPPVVVATSITTISTKTQTENPVHTAAGTQTKAELTVAVHTQTKSPVLNTCHTQTTSLKNIETDQSCVSNDVVITIDETKERSLSEKSFEIEINDSQMMKVETLTDDDGPEELFEIEETEPVYEAEECYELSTSELTGQDEVKEKVVNIGCDEDDTITLMYDDALTDITTTVEYLLDEEEEEEEEKEENDENNDNDDDDDDDDIAMMDDIKTVALTWWCKFCMNEFGTEEEHEQHQQLCEAKITEPKRYRVKRTSPKLGHGRPNVSEKNRGNFCELCNHVLKLGSTSYAQHMACHDQSLPILVDSVHFYRCGGCTNIYVSSMQLEQHLTETSDGFCASGNQHANTAKLKPFTNVQFLEDPDLMNVCQRLYSCTKLQENMFMCDWCSEFTDATVAGIINHFTKLHFDDVNADINVQPEHCHSFSDQHKCGVCNEQFATLLETFKHAYFHSTIYKCPYNQCSDNYSKFYQLHQHLERKHMEDIEFGCTHCMAVFGNYIEFRSHLRNECQERSLSCDICKKKFFSKRTLDIHRKYHFNDKRYSCTFCAKRFTQSGDLKMHERIHTGDKPYKCTVCNKAFRSTGNRKDHMSVHEDEKRYVCSYCSLQFKSERTLRGHMTLHTNPKKFRCELCRKEFHRSYHLKSHMRVHENS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -