Basic Information

Insect: Gnoriste bilineata
Gene Symbol: Rreb1
Assembly: GCA_026546565.1
Location: JANSWN010054361.1:4732-10390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 5.1e-05 0.0029 18.1 0.5 1 23 206 228 206 228 0.98

2 14 0.00025 0.015 16.0 0.3 1 23 237 259 237 259 0.98

3 14 8.2e-05 0.0047 17.5 6.6 1 23 265 287 265 287 0.99

4 14 0.05 2.9 8.7 2.7 2 22 408 428 408 428 0.93

5 14 1.4 82 4.2 0.2 1 20 482 501 482 503 0.77

6 14 0.033 1.9 9.3 0.1 1 23 677 699 677 699 0.96

7 14 0.00083 0.048 14.3 1.7 1 23 708 730 708 730 0.99

8 14 0.00035 0.02 15.5 2.8 1 23 736 759 736 759 0.97

9 14 0.0012 0.071 13.8 2.1 1 23 1104 1127 1104 1127 0.95

10 14 0.0001 0.0058 17.2 0.3 2 23 1432 1453 1431 1453 0.97

11 14 0.19 11 6.9 6.3 1 23 1459 1482 1459 1482 0.97

12 14 1.5 83 4.1 4.1 1 23 1592 1615 1592 1615 0.95

13 14 0.079 4.5 8.1 0.9 3 23 1664 1684 1662 1684 0.92

14 14 0.01 0.59 10.9 5.1 1 23 1690 1712 1690 1712 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	5.1e-05	0.0029	18.1	0.5	1	23	206	228	206	228	0.98
2	14	0.00025	0.015	16.0	0.3	1	23	237	259	237	259	0.98
3	14	8.2e-05	0.0047	17.5	6.6	1	23	265	287	265	287	0.99
4	14	0.05	2.9	8.7	2.7	2	22	408	428	408	428	0.93
5	14	1.4	82	4.2	0.2	1	20	482	501	482	503	0.77
6	14	0.033	1.9	9.3	0.1	1	23	677	699	677	699	0.96
7	14	0.00083	0.048	14.3	1.7	1	23	708	730	708	730	0.99
8	14	0.00035	0.02	15.5	2.8	1	23	736	759	736	759	0.97
9	14	0.0012	0.071	13.8	2.1	1	23	1104	1127	1104	1127	0.95
10	14	0.0001	0.0058	17.2	0.3	2	23	1432	1453	1431	1453	0.97
11	14	0.19	11	6.9	6.3	1	23	1459	1482	1459	1482	0.97
12	14	1.5	83	4.1	4.1	1	23	1592	1615	1592	1615	0.95
13	14	0.079	4.5	8.1	0.9	3	23	1664	1684	1662	1684	0.92
14	14	0.01	0.59	10.9	5.1	1	23	1690	1712	1690	1712	0.99

Sequence Information

Coding Sequence: ATGGAGCACCGTCGTATTTCATCGAATTCGGATTCTTCCGTTGAGCCAATGGACATTAGTGCAAAGACGACCAGCACGGATGCCAACTCATCGGTGGTATTAAAAAGTTCCGACCCAAACGATTCTGATCATGCTTTTGAATCGGATCGAGATGATCGATTACGCATGAGTCGGCTGGCATATCGAGCTGCAGCTGCAGCCACTGCCGCAGCCGTTAATCTTCCCATAAACAATACAGAAAACGATGGAGATGATGATGACGATGATGACCAGCACTTGCATCCGCAGTATCGATCCAACGAGTATAAGCACAATAATTTTGTACGCCGCGAAAATTTACGTCAACTCGAGGCCAACATGATGAGTATGCGAAAAAAGTTTCGGCTcagcatgccaccgggcaagattaataacaacaataacaacaacaataataacaacaataccatcaacgggcagtatgatttcgacaaGATTCATCCGCTGGTCAGCCGATTTCAAGCATCCGGAATGATTGGTGGGACGCCAGCAGTAGATAGTGCAGATTTTCACACCGGAATGTTGGATCCAAATGAAAATACAACAACGACAAATGGAAGCAAAGGTGATGTGAAGTATAGTTGTCCAATTTGTGATGCGGTATCAACTACCCAGCATGAGTTCACCGAGCACATTCGAAGTCACAATAATGCCGACGACACTCAGAATTTCACATGCAAAATTTGCTTCAAGGTTTTATCATCGGCTTCATCGCTGGATCGTCACGTACTAGTGCATACCGGTGAGCGTCCCTTCACATGCAAATACTGCCATGTCACGTTCACGACGAATGGTAATATGCATCGTCACGTGCGTACTCATAAGCAGCGCGACACTAATGGTGTTGTTGGAAGTGGTCGAAACCTTGGTGGAGACAGTGCAGTCGATAATTATGATAGTGATGGTGGTTCGACCGATTCCAGTGCTAGTAGCGGCAACAACAACCTAACAATCGACGGTAAGCGAAAGATCTCATTTGATGATGATGCTACTAGCTTAAAGCGACGCCTGAAAACTATCAACAACAACAACAATAATACAATCAGCAGCAAGCTTTCACCGCCTTTACCTATACCAGCGCCACAACAATTGCTATGCTGCCCAGTATGTGGTTGCTCGGAATTTCCCAATATGCTGACGCTTGAAAATCATATGGACCGTGAGCATCCTAGCATTCAAGCACGCTGCCGTTATTGTGAGATTGTGTTCAAGAGTCATAAAGCGTTAAACGCACATAAATGCACTGCCGTTGCCCTATACAAAACGGGTGGTGGTGGTGGTGGTGGTCAGATCACACAAGGCTTCAAAGATCTGACCTTCGTTGATTTTTCTAGCGAAAAATTCCCACTTATCGCTAAATCAATGTGCGAGCAAAGCGTTCGGATGCCGGTGACTAATCAAAAATACGAATGCCCAAAGTGTTATCGAGCTTTTCCGTGTGCGAGTGCCGTTGATATTCACATAAAAGCGTGTGGTCTATCACCGCAACAGCAATTGCAACACCACCTACCGTTGCACGGTGAAAGTCCTAAGGATTTTTCCATTCGAAAGCGCTTATGCAGTGATACCTCTGAAGAAGAAGCCAAACGTGATGATTTTTTCGCTCATTTGGATCTGCAGAATCGTTCAATAAACTCGAGTGCCATCACTTACAATTCCAGTATTGTCGATTCCATGTCATCGCCATACGGTTCGGATAAATCATCCAAAACGGATGTGAAACAAGAGCCACGAACTccacactaccttaatcatctgcagcagcagcagcagcagcataacgttcaacatcaccacacctacgATACCAAGGACCTCGCTGATATTCAGTCCATCATTAATGTTACGTCGTCCGGTGGCTTTATGCGTCAGCTGGACAAAAATGTTTCGCTGCCAATGACACCAAAAGAATTATCATACACCCGAGAAGAAGAAGAAGCTCAAGACGTATTCACATCTGAATTCCGTAAAATGAAGTTACGTGGTGAGTTTCCGTGTAAGCTATGCACTGCGGTCTTTCCAAATTTGCGCGCTCTCAAAGGCCACAATAACATTCATATCAGTGCAGCTGGATCTGGTCCATATCGTTGCAATATGTGTCCATATAGTATTCACGATAAGGCTGCACTAAAAAGTCATACGCGTACTCATAACGGTGATCGACCATACGAGTGCAGCATCTGCAATTATGCGTTTACAACGAAGGCGAACTGCGAACGACATTTACGCAATCGTCACGGCAAGACGACACGCGAAGATGTCAAACGATCGATTATCTATCATCCGTCAGAGGACTCGAGCTGTGACGATCCCGTTAAGAAAATGCAAATCTACAATTCTTCATATGACGATGAGGATAGTGTGCCAAAAGATCGTTGCATTACTCCAGTGTCTCATTTGAAAGACATTCTAACGCCACCATCGGAAAAGAGTCTCAAGATCCAAGTGAAAAGCATAGACCAGTTAATCCGGCCAGTTGTATACGAAAAAGAAGATAAACCCAAAACTATCGAAGTCGTAGCGCCAATTAAAGCGATTGAAGGTCGTCCAATGGACTTGTCCATGGATGTTTTGGATTTAAGCAAAAAATCCGTATCACCACCAGTAGATGCAGTGGTTGTAAAGCATGAAGAAGAAGAAGACATTGGCGGAGATGGTGATGAAGAAGACGAAAACGAAGAAGAAGAACCAATCGATGCTACAAAGATTGATTTGTCCATGTTCGAGAAAAACCAACAAATTCTAATGGCTCAACAGCAGTTCCTAAGCGAAGCATTCCCAAAGATTGACCCCGCACACTATTTCCAATTGTCGCAGCTGTACCGAAACTTTATGTTTCCTACGGCTGGTTTTCCATTACATCCTATGTTCTTGCAGAGTTCTTTTCTACCACCACCGCCTGCCAGCGAATTCAAAGATATGGCAAAAGACATGCCAAGATTGCCTCCTCCGCCGCCAATGTTTCCTGCCAACATGATGATGAACTCGTTGTTTCCGTCATCGCCTTCGTCGGGTCCTCCACCGCAGTCACAGCCATTGCCAACGCGTTTACATCAAACAAAGCGTGAAGTGTCACCTCAACGATCGGTGGCCTCTTCACCATCGCCACAATCAATGCAGATGCAACATAGTCCGCACCAACCGCAGCAGCTTCATTCAACCACTGCTCAGCCCAGCCAAGTGCATAGTCCTGGCCCAGTAAAAATGGTCATAAAAAATGGAGTTCTCATGCCGAAGCAAAAACAACGTCGGTATCGTACCGAACGTCCTTTTGCCTGTGAGCATTGCTCGGCTAGATTCACATTGCGCTCTAATATGGAACGCCACATTAAACAACAGCATCCACAATACTGGGCCCAGCGTCAACGTAGCGGTCACAATATCCTGAGACGTGGAAGTGGAGGATCTGGAGTTCCCAGCGCTCAGAGTAGTTCTATGCAAATGATGTCTCAGCATTCTACTTCTCTGCAATCATTGCCGAATCTTTCCAATCCACTAAGTGCTATCTCAGACCAAGTAAAGTACGCCATTCTAGCACAACAGCTCAAATCTCGCAACGATAAACCACCTGCCGAGTATTTTAGCAACGCATTCGGTGGATTGAACCAAaatcacaacaataacaacaataacaacaacaacagtggttgcatcgacaactccaatcacctgatcattcaacgtgaacatgaacgtgaaatgccacctcagtataatgccaataccaacaatgacaatgatgatgatgataacgaatcggaactgattatcgacgaagatagtgaACCAGAGGATCTGTCCAACAAAACTCCAGAACCAGTTGTGGCTACGCCAACGGTAGAAGTGAATATTGCTGCGAAAAAAGTGGCCGAAACCATTCTCGAACAAGCCATGCGTGTTGGATCTGCACCGGTCGAAAAAGATTTTGATTTGAAAATTGCACCAAACCTCATTTCACGCACAGAAACTGTCAATAAATATTTGAAAGTCAACTCGTCAACACCCTTCAAAGGCCAATCTGCGGAAGAAGGTGATCTAGTATCAGTGTCAAAGCTCGTTGACAATGCTACCAATGGCATGCCATTTGCCAGTTACTTTCGTCCTGATGTCACTCAAATTGATCACAGTGACGAAGAAGAAGGTCTAGTCGCTTCAGGCAGCGCTTCGGACAATAATTCTGGTACTGAAGATCCAAATCCAATATCAGTCGATGGAAAGAAAAAATCAGCCTACAGTTTGGCACCGAATCGTGTTTCATGTCCATACTGTAAACGCATGTTCCCATGGTCTAGTTCGTTACGTCGTCATATTCTCACCCATACCGGTCAAAAGCCATTCAAGTGCTCGCATTGTCCGTTGCTTTTCACCACAAAAAGTAACTGTGACCGTCATCTTCTTCGCAAGCATGGCAATGTTGAATCGGCCGTATCACTCTATATGCCCATCGAAGACATACCAGAACCACTTCAACTCAGCGATCACGAAACAGATGCGATTGATTGCGAAGAAGAAGTTATACCATTGGTCACAACAGCATCATCACCAGCACCAGTGGTGAAAATTGTAGTTGCTCCTGTTATTGTGCCAGCATCATCACCACCATCCGTACCGAATATTCAAACCTCAGCACATGTACCACTCAATATTCCAGTTATCCGTACTGAGACAAGCAACATTCCACAGCAGCAGCAGCCTCCGTCCATCAATTTGCCGACAAATAACACTGAACTTCCATTTAAGTGTCACCTTTGCGATGGTTCGTTCAGCGAACGTTTTAGCTGCCTCGAACATATTAAAGTTCAGCATTCGCAAGAATTTGCTTTGCTTATGTCCAAGGGAGCCATCGAAGCCGAATCTGCGTCTGACCATCAAATGGCATCGGCCGAAGACGATGACACCAAACCCGAGAATCGTGGCAAATATCCTGATTATGCTAATCGAAAAGTTATGTGCGCCTTTTGTATGCGTCGTTTCTGGTCCACTGAAGATttgcgtcgtcacatgcgcactcattccggtgaacgtccgttccaatgtgacgtatgcttgcgcaaattcacactgaagcatagCATGCTGCGTCATCAAAAGAAACACACCCATCACGCTCACAATCCAATCCATTCGAACAACAGTGCGTCCGATATGAGCGATGATGAACAGTCACCGCCACCACAGCCACCTCCTCCCAGCACCGCCAGTAATCTCTTATTGTCGCATGCTGCCAAACTATTGAAAATTCCCGATCTCATTCCAAAAGAGTTGGGCTGGAAGCTACACAACGAACGTAAAGAGAGTTTAGCTGCAGCTCTTATGCGTTCTGAATACTTTCGTGCAATGGAACGTGGTGACGTAACAGGAGCTGGCGGTGCTTCCGAAGAAACCAGTGAATTGATTGGCAATCTATTGGGCATTAGCGATCAAGGAATCCTGAATCGTGTACTGCTCAGTTCAGCTGATGAAGCTGCCAAATTGTTGGGCGTTGATAAATGA
Protein Sequence: MEHRRISSNSDSSVEPMDISAKTTSTDANSSVVLKSSDPNDSDHAFESDRDDRLRMSRLAYRAAAAATAAAVNLPINNTENDGDDDDDDDQHLHPQYRSNEYKHNNFVRRENLRQLEANMMSMRKKFRLSMPPGKINNNNNNNNNNNNTINGQYDFDKIHPLVSRFQASGMIGGTPAVDSADFHTGMLDPNENTTTTNGSKGDVKYSCPICDAVSTTQHEFTEHIRSHNNADDTQNFTCKICFKVLSSASSLDRHVLVHTGERPFTCKYCHVTFTTNGNMHRHVRTHKQRDTNGVVGSGRNLGGDSAVDNYDSDGGSTDSSASSGNNNLTIDGKRKISFDDDATSLKRRLKTINNNNNNTISSKLSPPLPIPAPQQLLCCPVCGCSEFPNMLTLENHMDREHPSIQARCRYCEIVFKSHKALNAHKCTAVALYKTGGGGGGGQITQGFKDLTFVDFSSEKFPLIAKSMCEQSVRMPVTNQKYECPKCYRAFPCASAVDIHIKACGLSPQQQLQHHLPLHGESPKDFSIRKRLCSDTSEEEAKRDDFFAHLDLQNRSINSSAITYNSSIVDSMSSPYGSDKSSKTDVKQEPRTPHYLNHLQQQQQQHNVQHHHTYDTKDLADIQSIINVTSSGGFMRQLDKNVSLPMTPKELSYTREEEEAQDVFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNNIHISAAGSGPYRCNMCPYSIHDKAALKSHTRTHNGDRPYECSICNYAFTTKANCERHLRNRHGKTTREDVKRSIIYHPSEDSSCDDPVKKMQIYNSSYDDEDSVPKDRCITPVSHLKDILTPPSEKSLKIQVKSIDQLIRPVVYEKEDKPKTIEVVAPIKAIEGRPMDLSMDVLDLSKKSVSPPVDAVVVKHEEEEDIGGDGDEEDENEEEEPIDATKIDLSMFEKNQQILMAQQQFLSEAFPKIDPAHYFQLSQLYRNFMFPTAGFPLHPMFLQSSFLPPPPASEFKDMAKDMPRLPPPPPMFPANMMMNSLFPSSPSSGPPPQSQPLPTRLHQTKREVSPQRSVASSPSPQSMQMQHSPHQPQQLHSTTAQPSQVHSPGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHNILRRGSGGSGVPSAQSSSMQMMSQHSTSLQSLPNLSNPLSAISDQVKYAILAQQLKSRNDKPPAEYFSNAFGGLNQNHNNNNNNNNNSGCIDNSNHLIIQREHEREMPPQYNANTNNDNDDDDNESELIIDEDSEPEDLSNKTPEPVVATPTVEVNIAAKKVAETILEQAMRVGSAPVEKDFDLKIAPNLISRTETVNKYLKVNSSTPFKGQSAEEGDLVSVSKLVDNATNGMPFASYFRPDVTQIDHSDEEEGLVASGSASDNNSGTEDPNPISVDGKKKSAYSLAPNRVSCPYCKRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYMPIEDIPEPLQLSDHETDAIDCEEEVIPLVTTASSPAPVVKIVVAPVIVPASSPPSVPNIQTSAHVPLNIPVIRTETSNIPQQQQPPSINLPTNNTELPFKCHLCDGSFSERFSCLEHIKVQHSQEFALLMSKGAIEAESASDHQMASAEDDDTKPENRGKYPDYANRKVMCAFCMRRFWSTEDLRRHMRTHSGERPFQCDVCLRKFTLKHSMLRHQKKHTHHAHNPIHSNNSASDMSDDEQSPPPQPPPPSTASNLLLSHAAKLLKIPDLIPKELGWKLHNERKESLAAALMRSEYFRAMERGDVTGAGGASEETSELIGNLLGISDQGILNRVLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -