Gbil006169.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- Zbtb41
- Assembly
- GCA_026546565.1
- Location
- JANSWN010044936.1:1-3205[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 6.5e-06 0.00037 21.0 0.3 1 23 234 256 234 256 0.99 2 13 0.0059 0.34 11.7 5.1 1 23 262 285 262 285 0.96 3 13 6.5e-06 0.00037 21.0 1.6 1 23 291 313 291 313 0.98 4 13 1.9e-06 0.00011 22.6 2.9 1 23 319 341 319 341 0.99 5 13 0.0059 0.34 11.7 0.6 1 23 347 369 347 369 0.98 6 13 0.00038 0.022 15.4 4.4 1 23 375 397 375 397 0.97 7 13 0.059 3.3 8.5 6.4 1 23 403 425 403 426 0.92 8 13 0.0036 0.2 12.4 1.0 1 23 447 469 447 470 0.94 9 13 0.71 41 5.1 0.4 2 23 476 496 475 496 0.80 10 13 5.7e-05 0.0033 18.0 2.0 1 23 524 547 524 547 0.94 11 13 0.0017 0.098 13.4 1.3 1 23 553 576 553 576 0.98 12 13 1.1e-05 0.00063 20.3 0.7 1 23 582 604 582 604 0.98 13 13 0.00037 0.021 15.5 4.9 2 23 611 632 610 632 0.97
Sequence Information
- Coding Sequence
- ATCGTTTCGTTAACCATGGAGTATATTGAGATTGATTTCTTCAATATGTGCCGACTTTGTACGTCGACGGACTCGGACAAATTGATACCCATCTTTGAACGTTCTGAGGTAGAACTAGATGCTATAATCAACGCATTTCTTCCCATTTCGATTGATATTAACGATGAGCTTCCGCTGCATATATGCAGCAAATGCAAAGACACACTAATCGCATTCGACCGGTTGTATCAGTCTTGTATCGAAGCCAAAACTCAATTCGAGCAAATGCTTGAGACATATGAGGTGGCCAGTGACGAAGCAGAAGTTGGCGAAAGTAAATTTGGCGTTGACGACGGAGACATTTCGGTTGTTACCGCCAACGATAAGCTGGCTAATATCATCTCAATAGCAACCATTTGTTCCATAGTACCCTCACCAGTCACCAATATCCCAAATGAAAAAGAGATCATCACTTTTACAGAACAGAAGTGCCCTCAAAACAATGATACTGCAGCTAACACATTTGTTGGGGTTCCAATGATTGGCATGAAAACCATAAATGTCGAGGACACTAGCCTAGAGAGAAGAAGCGCCGAATTAAAGTTCGACTCGATTCTTCCGCCGTTGTCTGACACTAGCATACCAAGCATTGAACCTGCGACAAATCATCATATGACTAATACAACGACGAGTTCCACGGTGATGAacgggcgaaaaacatttaaatgcgacatttgcgatagagaattggctacgcagcgtaccttaaatgatcacatgagaattcatacaggcgatcggccacaccgttgtcatttatgtccgaaaacatttcgtatcagcatcggtatgcatcggcatatccgtgaaacgcatatgcaaattcgcaaataccaatgtgacttgtgcgaccgacgatttaccaatcaacgtaacgtcaacgagcaccgtagactgcataccgaagaacgaccatacaaatgtgaaacgtgcaacaaaaatttcaAGCAACAGGCCTCGCTGTTCACCCATCGACGTATCCATCAAAAAGAATTTCGCTTCAAATGTCCACACTGTTCGATGGGTTTCAATGCTAAAACACCGATGAATCTGCATATTGCCactcacactggtgaaaaaccacacgaatgtgatgtttgtggacgacattttCGTGTACGCTACGAAATGACCAAGCACAAGCTGACACATTCAGACGTTAAACCATTCGTTTGCATCAAATGTGGTTTACGTTTTCGGCAAAAACGATATTTGGTGAAGCATTGTCGGACGCATCACATGGACATATTGCAAGAGCCCAAGAAACCGTCGTTACCCGGTATTCGTCGCCGAGGAAAACATATCTGTAGCTACTGTGACCGCATACTGCCCACGAAAGGCAAACTCACTGGTCATCTGATTGTTCACCATGCGGATAGTATTTTCTTCTGTGACGTATGCATGAAATACGTTGATCGATCGGAATTATTGGAACATATGACTTCACATGCCATTGCCATCGAACGCAACACGAGCGTAAAAGAAATACCAGCCCGATCAGCGATGCGTAAACACAAAAAAACTGGCCCATTCAAATGCCCGCACTGCGATAAAAAATTTACGAACCAAACGGGCCAACGCTACCATATTTTGGCGATACATCAGCAACAGCGAAACTACAAGTGCGATGTGTGTGATGCTGCATTCGTTTGCAAACGAACGCTTCGCAATCATATCAATAGTATGCATAGCAAACAGCCGTTATATGCTTGCGATCAGTGTCCTAAAACATTCAAAACCGATTCGACATTGTATGCACACCGGAAAGTTCATTCGGACACATTTCTCGTCAAGTGTCAAGTGTGCTTTAAAAATTTCAAGTTTCAACATCAGCTGAGGCGTCATCTCACCATGcacaccaaagagaaaacgcatttctGGAAATCGTCATGCAACAATAAACCGCCGAAGCACATGACAGAGGTAACCATAGATATCAGAGCGAACAATTCGTAG
- Protein Sequence
- IVSLTMEYIEIDFFNMCRLCTSTDSDKLIPIFERSEVELDAIINAFLPISIDINDELPLHICSKCKDTLIAFDRLYQSCIEAKTQFEQMLETYEVASDEAEVGESKFGVDDGDISVVTANDKLANIISIATICSIVPSPVTNIPNEKEIITFTEQKCPQNNDTAANTFVGVPMIGMKTINVEDTSLERRSAELKFDSILPPLSDTSIPSIEPATNHHMTNTTTSSTVMNGRKTFKCDICDRELATQRTLNDHMRIHTGDRPHRCHLCPKTFRISIGMHRHIRETHMQIRKYQCDLCDRRFTNQRNVNEHRRLHTEERPYKCETCNKNFKQQASLFTHRRIHQKEFRFKCPHCSMGFNAKTPMNLHIATHTGEKPHECDVCGRHFRVRYEMTKHKLTHSDVKPFVCIKCGLRFRQKRYLVKHCRTHHMDILQEPKKPSLPGIRRRGKHICSYCDRILPTKGKLTGHLIVHHADSIFFCDVCMKYVDRSELLEHMTSHAIAIERNTSVKEIPARSAMRKHKKTGPFKCPHCDKKFTNQTGQRYHILAIHQQQRNYKCDVCDAAFVCKRTLRNHINSMHSKQPLYACDQCPKTFKTDSTLYAHRKVHSDTFLVKCQVCFKNFKFQHQLRRHLTMHTKEKTHFWKSSCNNKPPKHMTEVTIDIRANNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -