Gbil005014.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- ZBTB41
- Assembly
- GCA_026546565.1
- Location
- JANSWN010019284.1:669-6111[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 8.5e-05 0.0048 17.5 1.3 2 23 173 194 172 194 0.96 2 19 0.059 3.3 8.5 3.8 2 23 206 228 205 228 0.90 3 19 0.019 1.1 10.1 3.5 1 23 234 257 234 257 0.96 4 19 0.1 5.7 7.8 4.7 1 23 265 288 265 288 0.93 5 19 0.037 2.1 9.2 0.1 3 21 297 315 296 316 0.96 6 19 0.002 0.11 13.2 0.3 2 23 323 345 322 345 0.97 7 19 0.00074 0.042 14.5 0.1 2 20 351 369 350 371 0.94 8 19 0.00031 0.017 15.7 4.0 1 23 379 402 379 402 0.96 9 19 0.17 9.7 7.1 1.8 2 23 424 446 423 446 0.96 10 19 5.1e-05 0.0029 18.2 0.2 2 23 451 472 450 472 0.96 11 19 0.0073 0.42 11.4 3.2 1 18 479 496 479 496 0.92 12 19 0.0052 0.3 11.8 5.1 1 23 578 601 578 601 0.93 13 19 0.0019 0.11 13.2 4.8 1 23 609 632 609 632 0.98 14 19 0.034 1.9 9.3 5.3 1 23 640 663 640 663 0.94 15 19 0.0023 0.13 13.0 3.2 1 23 666 689 666 689 0.98 16 19 2.2e-06 0.00012 22.5 0.3 1 23 696 718 696 718 0.98 17 19 3.3e-05 0.0019 18.8 1.7 1 23 725 748 725 748 0.97 18 19 1.2 69 4.4 0.1 2 23 770 792 769 792 0.92 19 19 0.42 24 5.8 0.0 2 17 797 812 796 813 0.89
Sequence Information
- Coding Sequence
- ATGGATCCATGCAGACTCTGCTTGCACGAAGCAGAATCATCCATTGATATTTTCAGTCCACAAGGAATCTACCTTAATGTGAACGAGATTTTATCGACTCATCTCTTCTTTGAGAGGTCAACAAATCAATCGCCGGTGATCTGCCTGAGCTGCTGGACAATCGTAGATCAGTTCCATCGGCTGTACATAATTGTGAAATACAATAACCAAAACCTGATATCGATTGACAGCAAACCGATCAAGCAAGAAGATGCGTTCGTGAACGATCAACAAACTTTGTCAATTGATAAGTCTGAAGAAATCTCAATAGATCCATTGGCGTTGGCTATGGTTGAAAAAGAACCTAATGATTTGCAGCACTCCAATAGCAAACCATTGGCGGTGTCTATTGATGAAGCAGAATTTAATGCTTTGCAGCACACGGAACAATCGCAGAATCAAAATGAAAATTCCAGTCGCCTGAAGGAATCGATTTCCATCCCAAACGGCAATGTCCGCGATAATCCCGATTCATTGAAATGCCCAACGTGTGGCAAACAGTTCAAACAGCTACGATGGTTGAATTATCATAAAATTAAACATGACGTCAAACCAGCTGATAATTTTGATTCAATCAAATGCCTAACGTGTGGCAAACAGTTCAATCACCGTCGAGCTTTGTATTATCATAAGGCCCATATGCATGAACATGAGCAGAAACACAAGTGTTCCAAGTGTTCAAGATTATTTGTGGGTAAACATTTGTTAAACGCTCACGTCAAGCTTTCTCACACACTAGACGAACAAAAGAAGTTCGAGTGCTACATTTGTCATCAAAGATTTTATCAAAGATCGAGACTCTTGTATCATAACAGTCGTACTCATGGAAAAGGCTCGAAAGTAATACTATGCAACTTGTGTGGAAATTGGTTCAAAAACCCAGAGAGTTTACGAGAGCATATACGACTTTATCAGGCATCCACTGTAAGATGTTCGAAATGCGGTCATGTATCGGACAATATCATAGCATTGCGAGCCCATATGAGAAGTGTCCATGATCCGATTGCCATACCATGCACCCTCTGTGGCAAAATACTAAAAAATAAAAAATCTCTAAAGGAACACATGGGCGTAAATGCAGATCGAACACATCCGTATTCGTGCAAATATTGTTCAAAAAGATTTCGGTCAACCTCTAAATTGTACGACCATCGAAAGCTTGAACATCCTGTCGAGCATGCTACCTTACACAAGCAGTCGCATATGCAATTTCATCATACATCCGAGAAAAGGTGTTCAAAATGCACTCATGTTGCAGACAGTACCATAGCGTTGCAACGGCATAGGAGAAGTGTCCATCCAGAACTACTACCATGCACCGTGTGCGGAAAAATGCTTAGAAATAGACAAAGTCTAAAGgaacacatggctatacatacaggtaaaaaagatctctattcgtgcaaatattgttcgaagacatttcggtctaacgACCAGTTCCATCGGCTGTACATAATTGTGAAATACAATAACCAAAATCTGATATCGATTGACATCAAACCGATCAAGCAAGAGGATGCTTTAGTGAACGATCAACAAGCTTCGACAATTGATCGATTGGTGGAACCTATGGTTGAAGAGGAACGAACTGAATTGCAGCAATCAGTGAAAACAGAAAAATCGCAAGATCAAAATGAAAATTCCAGTCGCCTCTGCGAACCAAAGATTTCCCACGATAATCCCGATTCGTTCAAATGCCCAACGTGTTTCAAACAGTTCAAGCATCGTCAATCGTTGTATAATCATAAAGCTAATATGCATGCACCAGAATACATGCGGAAATACAAGTGTTCTAAGTGCTCAAAATTATTTATGCGTAAACATTTGCTAAACGATCACGTCAAGCGGTCGCACAGATTAGACGATCAAAAGAAGTTCGAGTGCTACATTTGTCATCAAAAATATCATCAAAAATCGAGTCTCTTGAATCACTTCAGCAGTGTTCATAATTCTTATAAGTGTGAGGTATGTGGACGCTTCTTTAAATGTTCCATTTCGTACGAGCGCCACTATCGTATCGAGCACACGGATATGGCAAACAAATTCCAATGCACCGTCTGCGGCAAAATGCTTAGAAATAGACAAAATCTACAGgaacacatggccatacatacgggtcgaaaagatctgtacccgtgcacattttgttcgaaggcttttcggtcaagatccaatatgtacgcccaTCGAAAGCGTGCACATCCTGTCGAGTATGCTAGCTTTCACAAGCAGTCGCATATGCAACTTGATCAGGCATCCGATAAAAGCTGTTTGAAATGCGGTTTTGTAGCAGGCAATGTCATAGTACTGAAACAACATATGAGAAATGTACATTCAGCTAAACTACCATGCACCGTCTGCGGCAAAATACTTAAAAATAGAATGACTCTAAAGGTGACTTTGTGA
- Protein Sequence
- MDPCRLCLHEAESSIDIFSPQGIYLNVNEILSTHLFFERSTNQSPVICLSCWTIVDQFHRLYIIVKYNNQNLISIDSKPIKQEDAFVNDQQTLSIDKSEEISIDPLALAMVEKEPNDLQHSNSKPLAVSIDEAEFNALQHTEQSQNQNENSSRLKESISIPNGNVRDNPDSLKCPTCGKQFKQLRWLNYHKIKHDVKPADNFDSIKCLTCGKQFNHRRALYYHKAHMHEHEQKHKCSKCSRLFVGKHLLNAHVKLSHTLDEQKKFECYICHQRFYQRSRLLYHNSRTHGKGSKVILCNLCGNWFKNPESLREHIRLYQASTVRCSKCGHVSDNIIALRAHMRSVHDPIAIPCTLCGKILKNKKSLKEHMGVNADRTHPYSCKYCSKRFRSTSKLYDHRKLEHPVEHATLHKQSHMQFHHTSEKRCSKCTHVADSTIALQRHRRSVHPELLPCTVCGKMLRNRQSLKEHMAIHTGKKDLYSCKYCSKTFRSNDQFHRLYIIVKYNNQNLISIDIKPIKQEDALVNDQQASTIDRLVEPMVEEERTELQQSVKTEKSQDQNENSSRLCEPKISHDNPDSFKCPTCFKQFKHRQSLYNHKANMHAPEYMRKYKCSKCSKLFMRKHLLNDHVKRSHRLDDQKKFECYICHQKYHQKSSLLNHFSSVHNSYKCEVCGRFFKCSISYERHYRIEHTDMANKFQCTVCGKMLRNRQNLQEHMAIHTGRKDLYPCTFCSKAFRSRSNMYAHRKRAHPVEYASFHKQSHMQLDQASDKSCLKCGFVAGNVIVLKQHMRNVHSAKLPCTVCGKILKNRMTLKVTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -