Gbil009820.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- hang
- Assembly
- GCA_026546565.1
- Location
- JANSWN010092127.1:1-5416[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.00046 0.026 15.2 1.0 2 23 41 63 41 63 0.96 2 24 1.5 88 4.0 2.8 2 22 149 169 148 169 0.93 3 24 0.58 33 5.4 0.9 3 21 179 197 178 198 0.94 4 24 0.017 0.98 10.2 0.6 3 23 241 262 239 262 0.92 5 24 1.9 1.1e+02 3.8 0.1 2 23 302 324 301 324 0.89 6 24 0.0014 0.083 13.6 0.9 3 23 389 410 387 410 0.95 7 24 0.00012 0.0067 17.0 0.1 1 23 418 441 418 441 0.97 8 24 0.041 2.4 9.0 0.1 1 23 453 476 453 476 0.96 9 24 0.24 14 6.6 0.3 1 23 479 501 479 501 0.94 10 24 0.0018 0.1 13.3 2.1 1 23 507 530 507 530 0.96 11 24 0.0012 0.071 13.8 0.3 2 23 667 688 667 688 0.98 12 24 0.035 2 9.2 2.9 2 23 728 750 727 750 0.95 13 24 0.0058 0.33 11.7 0.3 2 23 759 781 758 781 0.95 14 24 0.00017 0.0096 16.5 0.8 1 23 827 850 827 850 0.96 15 24 0.0017 0.099 13.3 0.7 2 23 885 906 884 906 0.97 16 24 0.0079 0.45 11.3 4.5 1 23 914 937 914 937 0.95 17 24 3.4e-05 0.0019 18.7 0.4 3 23 946 966 944 966 0.97 18 24 0.0092 0.52 11.1 4.6 2 23 1007 1028 1006 1028 0.96 19 24 0.0025 0.14 12.8 0.1 1 23 1072 1094 1072 1094 0.93 20 24 0.0018 0.1 13.3 0.1 2 23 1132 1154 1132 1154 0.91 21 24 0.018 1.1 10.1 0.4 2 23 1179 1200 1178 1200 0.95 22 24 7.4e-06 0.00042 20.8 0.1 3 23 1214 1234 1214 1234 0.99 23 24 0.00053 0.03 14.9 1.0 1 23 1375 1397 1375 1397 0.97 24 24 4.3 2.4e+02 2.7 1.2 2 22 1456 1476 1455 1478 0.85
Sequence Information
- Coding Sequence
- AGCACCGAAATGGGTCATGATACGTCTACGGGCGCTGGCGGCTCTACCATCGGTAACGAATCGCTGTTTGTATCGCCACAAAAACTACAAAATATGAATCGTGGACGCTCATCGCAACCGCAGTGTACGATTTGCAATATGAAATTTTCAAATCGTGCAAATGCCCGTCGCCACGAACGTAATATTCATGGAAAAAATTTGATAAGCGCCACCATGCTCATGCTGAAGCATAAAAATCAAATTTCAATATCCGCACCGATGCGACCGAATCAAAATCGTCCACAAATGCGGTCCGGTGGCCGCGTCACTAAAGTCGCTCACAAACCATTACCCAAAATTGCTTTTGACTACACAAAACCTGAACTGTATCGTGAACTATTAACCGATTCCAAGGTGTACTTCATTAGGCGGCACATTGAATTCCTTGAGCAATACCAGAATATGCGTTGCACGTGCTGCAATCGCGACTTTCCCACGTACAAATTCTTTATGGCTCACATGCGTAAGAAATACGACACGCTGTCGCGTAATCTTTGCTTCAAGTGTCTGAAACAGTTCGATTCGAAATCATTGTTCATCGGGCATTTGAAAAAGAAGAACTGCATCAACTTGTATAAGGTGTACTGTGCGGATGATACAATTACTAAGGATCCGTTGCCACCGACACCGGGAACTGTACGCACGGGTGCCAAAGAAATCATTGCAAACAAAGTGTACGGATGCAAACTTTGCGACAAGACATTCCGACTGAAGGTCGATTTCCGTGGCCATGTTTTCGTTTCGCACGCCGATGAACAGAAGAAAGAGCAAATCGGTCCGACGTGTGGCTACTGCAAAGTCGACTTTGATGATCCAATTATTCGTCGACGTCATTACAATACCATGGAGTGTATAGTGTTTTTGATTTGTGGCACATGCGATTCCAATTTTGACAATCTGGCCCAGTATATTGAGCACGTGCATGCCGATCATTTGCAACCATTAGCAGTGGCCGTACCGGCGCCAGTCAAAGCCGAAGCTTCCGATCTGGTGGTGGGTGGTGCCGGCGGCGGCGGCGGCGGCGATGAGGAATCCGATTCAAACATGCCACCACTGCGTTGGGATGACTTCAACAGCTCTGGGGAGCTAGACACTAGCAATACTCGCATGAGAAATCCACAAAATTGTCGAGTGTGTGGCAAACAGTACAATAATTACTACAACGTTCTGCGACACATGGAATCAAAGCATCCGGACAAATTGCCAAGAACGTATCGCTGCGAACAATGTGGCGTTGGGTATCCACGACAGGTTGAGTTGCGCGACCACATGTCTAAGGTGCATGGGGTCGTAATGCCAAAGATTCGACGTGAGATATTTACGTGCCGTGAGTGTGGCGCTGTGTTTGATTTGAAAGAAATGTGGCTGGATCATCAGGTAACCACTCACTCGAAGTTTTATTGTCACTTGTGTGAAATGCAAACGGAGAATATTGAACAGCTCGAGGCACATTTGGTGGAGCACAGCAAAATCAAAACGTTTAGGTGTCATTTGTGTCAGCATTCGTTTAATTCAGAACGTGGCCTGGAAACGCATTTGGCCGTTGTGCATTACATGAAAGATGAACAAGCGATCACGAGAAGCCATCCGTCAGTGCAGAGTTCTGATGCTGGTGACTACAAATGGTCCGAGGACGGAACGaacgatggtactggtaatgctgctgcggctggtggtggtagtggtggaggtggaaatgacagcgaaatgaatgccgatgatgaagaagattatggcgctgacgatgatggtgttggtgctgatgttagcagtgccctggaagttcacatcaacggagacgatgatgaagagtacgatggagacgatggtgacctagacgaTACGATCGAGATAGTGCCTGCGAAACGTCCTAAATTGGAAATGCCTCCTTTGGTACCAGTGCGTCAGGCGATGTCGACGCCTAAGTCAACGTCGATCATTGGTGCGCACACTATCAGAAAATGTCCGTTGTGTCATGAGACATTCAGCGGTGGCATTGCGTTAGCCAATCATTTACGTACGCATGGCATACCATCGATGCGTCAGTTCATGCCGAAATTGCCTCGGCCCATATTGCCACGACCTCCGGTAGCTGTTCGAGCAGCAAATAGTTCAAGTCGACCACATGTAACGAGTCGCATGCGTTGCCGAATTTGTCAGAAACGTATTCACACCAAGGCCAGCTACAAGCGACATATGCTGAACGTACATGACGTAAGCAATTGTGTTTTTATCAAATGTACGTTGTGTCCAGCTGAATTCAGCAACGACAAAGGACTAAAAGTACACATGTTCCGCACACACAATGTGAGCGTACAACAAATGCAGCAAGATGTAAGGTTGCGTCCGGTACCCAGGAAAGAATCTACGTCAGCCGGTCCATCGGAATCGACAAAAGTTGCTGGAGTTGTAAATTTGTTACCCAAGCCAAAGGTGATGTTCGAATGTGACATTTGTCACACGGTGTATCGCAGTACAGAGCAGCTGAAGGCCCACAGAAGTGTGGTTCACGGTGCTATTGCCAATGAAACCAAACCAATGAAACAAGAAATGACGGGTAGCGACAACGAAGACGTAACAGACCCAGCGCTTACTGTCCCAGAAGCTTGGTGGCAGTGTCGGTATTGTGAAGAAAATTTCAACGCTAGCAAGAAGCTTACCATACACATGAACAGTCACGAGGAGCACGACACCACCGATCATTCATGTACGGACTGTGGTAACGTTTATCGGTCTCGTAAATCCCTGTGGGTACATCGTCACAAGAAGCATCCACGCCTCCCGAATCCATCCATCTGCGAGCTATGCGACAAAGTGTTCTTCGACAAAACCGAACTTTTCGTTCATTTGAAAACCCACTCAAACGCTGATGTATTCTCGCATCTTACCGAAATGCAATCACAGCTGGCCGATGAGCAAGCCACCATTCAGCAACAAAAGAAAGACAACGCCGGACCCGCCACCGAAGTCGAAGCTTTGTCGTGCCATTTATGCGGCCAGAAATTCCATGACAAACGTGTGCTCAGCAAGCATTTGCGTTTACACGAAAACACCGAGCCCGAAGGCATCGCCGAATTGCATCCGCTCACTTCGTTCCTTTCCGATCAGGTACCCAACGATGGAGAGTCCGACTACAACTACCCATCGTACCAAGGACAAATGGTCGATGGAGAATACGCATGCGATATGTGCCCCAAAACGTTTCCACTAATGAGCGCGTTAAAGGTTCACCGTGGCTGGCATTTCCGCAGTCCCGATGGCCGTCAAGTCACCGATCCCGAGAACATGTGGCAACCCGAATCGATGTCGTCACATTCGAGTAAGGCAAAACGTGCACGTCTATTGAATCCACCCGTTTGCCCTTACTGCAATTCAACATTTGCCAGCGGTAATAATCTGCGGCGTCACATTGTCGAAGTGCATAAGCGCAATGAAGCACGACAGATGCGAGAAAATGGTACGGTCAGCGATTCCGTGTACGTTGAAAAAGAACTTGAGTGTCACACGTGCGATATTACCTTCAATAGTCGACCGGAATGGGTGGACCATAAGATTTCGCATGCGCGCACCTTTAAACCATCGACGACATTCGAATGGGGATGCGAAATATGCGGAAAGGTGTTCACACGCAAAGAGCGACTACTTGCACACATGATCATTCACTTGGGCAAGGAAGAACCGGACGCTACCGGTGCTGATGATAGTAATTCGCGTAGTTCGTTATCGTCGCAATCACAATCACAATCACAGCAGTCCCAGGAATCGGGTAAGCTGAAAGCGGCACTGCTGAAAAAACATTCGACACTACCGCGTGAACATCCAGGAACGGCTGATTCGCCAGCGATAAAAATGGAAGAGTCCGAATTcgaagatgacggccaagaagaagagttatacgatgacgaagtggatgatgacgaacagatggccgaagatgaggagcagcagcaagaagatgatgacgatgaaaatgctgacgacgatgatgaacaacacgaagaagtcgtagaagacggtgttgtcgaacacgagaacggcaatggagctgaagtcgaagaagAAGAAGAAGAACCGGTAGCTGCGTACTCGTGTGATCTATGCCAAGTGTATTTCCGCACGGCCAAGGATCTGCGTCGTCACGTGACAAGTCACATAATCAACGGTCCTGAGATCACCATAACGACGAGCAAACCAAAAGTTGAAGAATCAGCGGCCGGATCTCGTCAACAACTAGATGGATTCAAGTGTCGTTTATGCGGATCGAGCAGTGCATCACACATTGGAATGATCCAATGTATGGACGGGCACAAGGTGGCTACCGGTCTACAGTGCGATCTGTGTCATCTGTACTTTGCCGACCAACAGATGATGGACGAGCACGAAGAACTTTGTCATCCAAATGATTATGATTAG
- Protein Sequence
- STEMGHDTSTGAGGSTIGNESLFVSPQKLQNMNRGRSSQPQCTICNMKFSNRANARRHERNIHGKNLISATMLMLKHKNQISISAPMRPNQNRPQMRSGGRVTKVAHKPLPKIAFDYTKPELYRELLTDSKVYFIRRHIEFLEQYQNMRCTCCNRDFPTYKFFMAHMRKKYDTLSRNLCFKCLKQFDSKSLFIGHLKKKNCINLYKVYCADDTITKDPLPPTPGTVRTGAKEIIANKVYGCKLCDKTFRLKVDFRGHVFVSHADEQKKEQIGPTCGYCKVDFDDPIIRRRHYNTMECIVFLICGTCDSNFDNLAQYIEHVHADHLQPLAVAVPAPVKAEASDLVVGGAGGGGGGDEESDSNMPPLRWDDFNSSGELDTSNTRMRNPQNCRVCGKQYNNYYNVLRHMESKHPDKLPRTYRCEQCGVGYPRQVELRDHMSKVHGVVMPKIRREIFTCRECGAVFDLKEMWLDHQVTTHSKFYCHLCEMQTENIEQLEAHLVEHSKIKTFRCHLCQHSFNSERGLETHLAVVHYMKDEQAITRSHPSVQSSDAGDYKWSEDGTNDGTGNAAAAGGGSGGGGNDSEMNADDEEDYGADDDGVGADVSSALEVHINGDDDEEYDGDDGDLDDTIEIVPAKRPKLEMPPLVPVRQAMSTPKSTSIIGAHTIRKCPLCHETFSGGIALANHLRTHGIPSMRQFMPKLPRPILPRPPVAVRAANSSSRPHVTSRMRCRICQKRIHTKASYKRHMLNVHDVSNCVFIKCTLCPAEFSNDKGLKVHMFRTHNVSVQQMQQDVRLRPVPRKESTSAGPSESTKVAGVVNLLPKPKVMFECDICHTVYRSTEQLKAHRSVVHGAIANETKPMKQEMTGSDNEDVTDPALTVPEAWWQCRYCEENFNASKKLTIHMNSHEEHDTTDHSCTDCGNVYRSRKSLWVHRHKKHPRLPNPSICELCDKVFFDKTELFVHLKTHSNADVFSHLTEMQSQLADEQATIQQQKKDNAGPATEVEALSCHLCGQKFHDKRVLSKHLRLHENTEPEGIAELHPLTSFLSDQVPNDGESDYNYPSYQGQMVDGEYACDMCPKTFPLMSALKVHRGWHFRSPDGRQVTDPENMWQPESMSSHSSKAKRARLLNPPVCPYCNSTFASGNNLRRHIVEVHKRNEARQMRENGTVSDSVYVEKELECHTCDITFNSRPEWVDHKISHARTFKPSTTFEWGCEICGKVFTRKERLLAHMIIHLGKEEPDATGADDSNSRSSLSSQSQSQSQQSQESGKLKAALLKKHSTLPREHPGTADSPAIKMEESEFEDDGQEEELYDDEVDDDEQMAEDEEQQQEDDDDENADDDDEQHEEVVEDGVVEHENGNGAEVEEEEEEPVAAYSCDLCQVYFRTAKDLRRHVTSHIINGPEITITTSKPKVEESAAGSRQQLDGFKCRLCGSSSASHIGMIQCMDGHKVATGLQCDLCHLYFADQQMMDEHEELCHPNDYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -