Basic Information

Insect: Gnoriste bilineata
Gene Symbol: -
Assembly: GCA_026546565.1
Location: JANSWN010017451.1:6138-8876[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.63 6.2e+02 0.7 7.8 5 44 41 76 37 76 0.90

2 9 5e-11 4.9e-08 33.1 1.1 2 44 114 154 113 154 0.98

3 9 0.0007 0.68 10.2 0.5 5 41 352 387 348 398 0.88

4 9 8.5e-12 8.3e-09 35.5 3.0 1 44 401 441 401 441 0.97

5 9 9.9e-08 9.7e-05 22.5 0.7 5 44 477 513 474 513 0.93

6 9 1.9e-12 1.9e-09 37.6 1.6 1 44 582 624 582 624 0.96

7 9 6.7e-14 6.6e-11 42.2 0.6 1 43 721 761 721 762 0.97

8 9 1.5e-05 0.014 15.6 0.8 3 44 799 839 798 849 0.94

9 9 2e-07 0.0002 21.5 1.1 3 41 865 902 863 904 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.63	6.2e+02	0.7	7.8	5	44	41	76	37	76	0.90
2	9	5e-11	4.9e-08	33.1	1.1	2	44	114	154	113	154	0.98
3	9	0.0007	0.68	10.2	0.5	5	41	352	387	348	398	0.88
4	9	8.5e-12	8.3e-09	35.5	3.0	1	44	401	441	401	441	0.97
5	9	9.9e-08	9.7e-05	22.5	0.7	5	44	477	513	474	513	0.93
6	9	1.9e-12	1.9e-09	37.6	1.6	1	44	582	624	582	624	0.96
7	9	6.7e-14	6.6e-11	42.2	0.6	1	43	721	761	721	762	0.97
8	9	1.5e-05	0.014	15.6	0.8	3	44	799	839	798	849	0.94
9	9	2e-07	0.0002	21.5	1.1	3	41	865	902	863	904	0.91

Sequence Information

Coding Sequence: ATGGATCGAATACTAGATCCATTGCTAGTAACTATACCACGGCCATCACGTAAAATGGAAAACATAACTCATACAGAACCGGTGAGATGCTGCAGTCTCACGTTGAACACAAATTTGCGTCAACACTTCACCACAACCGACACCGGACGCACAAAATGCAATACATGCTCGACATCGTTCAAATGCTGCTGTACAACATTGCGTTTGCATATGCAACAGGAACATCCTGCGTTTCAGCTTGTAGAAATTATGAAAATTGCCGAAAATGTGCAAGAGAAACCGATGTCAAACAACAGCAACAACAACAACGCACCTAAATCTTCAACAACAAATAGGCCCAACGTCTGGAAACATTTCACCAAAGCAAAACGTTGTATGGCCAGCTGTGACGTTTGCAAAGTGATATTATCGATACGTGGTGGCCAAATGAATCTATGGAAACATTTACGCATCCAGCATCCACAATATTTGCGTCGCATCAAAGAATTCGTGAGAATCGACAGTATTGATGAACCCGACATAAGAGCGACAAAACCTCGTATACTTCCACCAGTTAAGGATTTACCAGATGCTAAAATGATATCAGCAACGTCCAATGTTAAAATCGAAGCCGAATTCATTGATTTCATTGGATTTCCGGAAATTTCCAATCTAGAGCAAGAGCTCGACAATGAAATGGTGGCTGATGCATTCGATACATTTAACGATGAAAAAGCAAAACCAATCAGTCAAATTACGGTTACTGAATGTGTCGAATCATCTGACGACAATGAGCGCAACAAAGGCAAGCCAGCTAATAAAATCAAAAATGATAAATCCAAACCGATCGATCACAATTCGTTTCATGAAAGCGGCGAATCATCAGACGACAACAATGAAACGCCGGCTACGGAAATCAACTCGATCAACGTCGATAAATCGAAACTGATCGATAACACTTCGTTTGATGAAAGCGGCGGTTCATCAGATAACTATGAGCCAGATACGGCGGCGGAAAATTCTTCAGACAGCAGTGAAAATGACATCGTCAACGCTGAAGGCTCACATGCACGCGATCACTTTACATTTGATACACCAGATATGGCCAAATGTAAAGACTGCCAAGCAATGCTGCCTTTTAAGTTAAACAAAAATAGAAACTTGATCGAACACTTGAAAAGCGAATCACATTTGCGAAACCGTCGACTATGTCCAACCAGATCGGCAGTGTGGAATTATTTTACGAAAATTGAAGCTAAAACATTCAAATGTAATTTGTGTATGGCCAAGCTAAGAGCCAAATGTAGCACCAATTTGGGAAGACATTTACGAACCCGTCATCAGCTTGGTCTAGTTGATGGTTATTTGGTGCCCGTTCCAAAAAAACCAAGGCAAGAAAGGATGCCAATGTCACGAGAACTTTCGTTTAAACAAAACCCAGTGCTGCGAAAGTATTTTACTAAGATTAAAGGTACCGATTTCAGATGTACTATATGCAAAGCAAAATTATCCGGCAAAACCAACAGCAGTTTAGGAAAACATTTGCGTACCGTTCATCAGCTATTATGGCAAGCAAAATCTGTACATCCAAAATATTCGGTTCACCATCATAAAAAACTAAAGCCACACAATGAAGATGATGATAACCTTCCGTTGGTTGCATTTATCGATAATAATGAAATACCATCGGTGGTACAACAGAAGCTCGGTTCGGCTGAGAATGGTACGATTGAATCATTGTCTTCTAAACAGGAGCGAAGACAATCTTCTGTATGGTTACATTTTCGTCAAATTAAAGTTGGAATATTAGAATGTATTACGTGTCATCGAGTGCTTTCGATAAGGAATGGAACATCGTCGAATTTGAATAGACATTTGCGTACTAGACATCCTGAATTAATGGAAATCATAAGTATACAACAACCGTCTGCTGAGCAGAAAATTGAGAAAATTTACAACGACGAGCAGTCATTGCATGACGACGCTGAATCGTTCGTGGACTCCATTGATGATGAAAACAATGACTATGATGTTGCAACCGAACCTCAATCATCGGGTGACTATACTGATATCACCAACACTGCCGTCGTCCAAGCCACCACCACCACCACCGCCGTTGCCGCCGCTGACAAGACCAATGACTACAATGTCAAAGATAAGAAATACATAAAACCGAAACGTTCAGTGATATGGTTGCATTTTGTATTACAACCAAAAAACAAAGCGCAATGTCAATTATGCCATCAAGTATTGAGTGCAAGCGGCGGCTCAACAAATTTGTTTAGGCATCTACGGTCTCGACACATGGATAATCCTGAAGTAGTTAAATCACTAAACGAAGAGCGACCTAAAAGGAATAAAATTGAAATTAAATTCAAGTTGCCAATTGTAACGGATAAATCGGAGACCCCATCAGTTTGGAATCACTTTGCCTTAGAAAGTCTTGGAGTGGCAAGGTGTACTACTTGCGATGCATTGGTCGCATGCAAAGATGGAAAACGTGCAAATCTACGCAAACATATGCACGACAATCACAGTGACATTGTCGACGAACTGCGTCGCAATCATTTCAGTACGAGAGGATCGACGGATCATGGCATTGGTGTGTCGGGATTGTGGCGTTATTTTACGCGCAAAAATGAAGGAGAAGTTGAGTGCGATGTTTGTCATGCGATACTGCATCATCGTGGAAATACAACAGATGTTTTACTGCAGCATATGAAGCAATGCAATTGGACATTGTTGAAACCAAACGAATAG
Protein Sequence: MDRILDPLLVTIPRPSRKMENITHTEPVRCCSLTLNTNLRQHFTTTDTGRTKCNTCSTSFKCCCTTLRLHMQQEHPAFQLVEIMKIAENVQEKPMSNNSNNNNAPKSSTTNRPNVWKHFTKAKRCMASCDVCKVILSIRGGQMNLWKHLRIQHPQYLRRIKEFVRIDSIDEPDIRATKPRILPPVKDLPDAKMISATSNVKIEAEFIDFIGFPEISNLEQELDNEMVADAFDTFNDEKAKPISQITVTECVESSDDNERNKGKPANKIKNDKSKPIDHNSFHESGESSDDNNETPATEINSINVDKSKLIDNTSFDESGGSSDNYEPDTAAENSSDSSENDIVNAEGSHARDHFTFDTPDMAKCKDCQAMLPFKLNKNRNLIEHLKSESHLRNRRLCPTRSAVWNYFTKIEAKTFKCNLCMAKLRAKCSTNLGRHLRTRHQLGLVDGYLVPVPKKPRQERMPMSRELSFKQNPVLRKYFTKIKGTDFRCTICKAKLSGKTNSSLGKHLRTVHQLLWQAKSVHPKYSVHHHKKLKPHNEDDDNLPLVAFIDNNEIPSVVQQKLGSAENGTIESLSSKQERRQSSVWLHFRQIKVGILECITCHRVLSIRNGTSSNLNRHLRTRHPELMEIISIQQPSAEQKIEKIYNDEQSLHDDAESFVDSIDDENNDYDVATEPQSSGDYTDITNTAVVQATTTTTAVAAADKTNDYNVKDKKYIKPKRSVIWLHFVLQPKNKAQCQLCHQVLSASGGSTNLFRHLRSRHMDNPEVVKSLNEERPKRNKIEIKFKLPIVTDKSETPSVWNHFALESLGVARCTTCDALVACKDGKRANLRKHMHDNHSDIVDELRRNHFSTRGSTDHGIGVSGLWRYFTRKNEGEVECDVCHAILHHRGNTTDVLLQHMKQCNWTLLKPNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -