Gbil015623.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- clz9
- Assembly
- GCA_026546565.1
- Location
- JANSWN010044349.1:482-2952[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-09 5.8e-06 26.1 0.0 1 35 9 43 9 50 0.89 2 2 8.2 9.9e+03 -3.4 0.0 7 15 493 503 492 503 0.77
Sequence Information
- Coding Sequence
- ATGGGTAGAATCAACAAGTCATACACGGAGAAAAATCTGACTGATGCATTGGACTGTATTGCCAATGGTATGTCAGTTCGGATGTCGAGCAGGAAGCATGGTATACCGCGATCAACCCTGATCGATAAATATTCCGGTAAAAGTAAAATGAATAAAAAATGTGGGATACCAACGGTATTATCTTCTATGGAGGAAGATCGGATTCGGAAGTGGGTTGTAGACATGGCAAAGCGTGGATTTCCGCCAACAAAAGAAAAGCTTGTGACAACTGTACAGCTTTATTTGAATCTCGCTAAACGTACAACCCCTTTCACTGACAATCGGccaggacgaaaatggtatagcgggtttctgaatcgtcatccagacttggctgtgcggacatgccaaccactcacatctagtcggtcggaaataactgaatcaaaaatcagaaactggcaccaggaagtacgctcatacttaatatcgaatattccagacgcattaaacttgctcggcaatccaaaccgcatttacaacttagatgagacagcattctaccttgcaccaaaatctgacaaagtcctgacaagtaaaggatccaaatcagtacatttcagatgtcgtaatgacgaaaaagagtgcgttactactctagtgactggaagtgcgggtggattagtcccaccgccgatgataatgcacacgcaaaagaggattccttacaacattgtcaagaacacaccaagtacgtggggattgggacggtctgattcgggatggatgactggtgaatccttttatgagttcattgcaaacgtattttacaagtggttacttgaaaacagtataccgataccagttcttctgtacgttgatggtcacaagtcacatctgacgcttaatgtcagcgaattctgtagcgaacatggcataattttggttgctttatacccaaacgctacacacattctgcagccgcttgatgttgccgttttccgaccattgaagttgcaatggaaaagagctgtatgtgattggcgagcccgtaacaatgaagctaaggtccgaaaggaagatttcgctagaattttggaacaagccctattaaacacggatatggcgtcgaatttggcaaatggatttcgagtttgtgggctgtatccatttgaCGAAAATGCCATACCGTATGGAAAACTATTGGCTCGACTCGATGATCAAGTAATTGAAGCACTACAAGAACCACACGCAACAGACCTAACTGAAGCAGCCAATCGAAGCACTTTAGCCGACCAATTGGAGGATCACATTGATTTTGACAATTTGGCACAACATGAACTTGAACCACCACATGAACCAAACGCTGCAGACCTAATGAAAACTGCCAACGGTAGCACTTTAGCCAAACAACTGGAGGATCACATTGGTCCTGACATGTTGACACAATTTCGGACTGCCCAACATAGCATTTCATGGACTGGTGCTGTTGAGAATAAGGCGCTTTTCGATGTTTGGAGGACCAACGGATACGTCAATACTATTGATGTTGCAGTTGTTGAGGATGTTTCCGCAACGCCTAATATTCAAAATGAAATTATTTTTGAAGAATATATGGTAATCAATCATGATCAACCTACATGTGGAACAAGTGACTATATGTTTGACGCAGACTGGATTTCAGAAATGGTACATTTCGAGTCAAGCCCGCAACGATCGCCTAAGGATAGTGAGACCATGATTTCAACTTCAAAAGAAAACTTAATAATAGCACCACAGACAACCTGCTTGAATGAATCCGAGCCAAACCGCCGATTGTCTTCAACAACTCCATTTAAAACTGTTTTTTTTTGCCCCAGTGCGATGAATGTGACTACTAAAAGACCAAAGGTAAAAATTCCAACCGTTGCCACATCAAGCGAATGGTTGGATTTCTATAATAAGAAGCAGCAGGCCAAAGATTTACTTGAAGAACAAAAGATAGAGAGACTAAAACAGAGAAATGAAGCAATGATAAAGAAAAATGAAACCGGCAAAACGGCAAAGGTTAAAAAAAATCTTTTTGAGAATGAGCCGAATTTGGAACTAGAGCGCGGAGCATTCGTAATTTTTGAATATGAAAAACAATATTTTCCTGGACTTGTTGTTGAGCTATTAAACTCAAAACTGCTTATAAGCTCAATGGCGATGAGTGGTGTTGGCAATTGGAAGTGGCCTGATAGAGAAGATAGACTGTGGTATAATGTCGATGATGTGATAAAAGTGATTAAATCACCTATTGCCAAAAATAGCCGAGGTGAATTTTCTGTACCTGAGATGCAATCGTACAATTAA
- Protein Sequence
- MGRINKSYTEKNLTDALDCIANGMSVRMSSRKHGIPRSTLIDKYSGKSKMNKKCGIPTVLSSMEEDRIRKWVVDMAKRGFPPTKEKLVTTVQLYLNLAKRTTPFTDNRPGRKWYSGFLNRHPDLAVRTCQPLTSSRSEITESKIRNWHQEVRSYLISNIPDALNLLGNPNRIYNLDETAFYLAPKSDKVLTSKGSKSVHFRCRNDEKECVTTLVTGSAGGLVPPPMIMHTQKRIPYNIVKNTPSTWGLGRSDSGWMTGESFYEFIANVFYKWLLENSIPIPVLLYVDGHKSHLTLNVSEFCSEHGIILVALYPNATHILQPLDVAVFRPLKLQWKRAVCDWRARNNEAKVRKEDFARILEQALLNTDMASNLANGFRVCGLYPFDENAIPYGKLLARLDDQVIEALQEPHATDLTEAANRSTLADQLEDHIDFDNLAQHELEPPHEPNAADLMKTANGSTLAKQLEDHIGPDMLTQFRTAQHSISWTGAVENKALFDVWRTNGYVNTIDVAVVEDVSATPNIQNEIIFEEYMVINHDQPTCGTSDYMFDADWISEMVHFESSPQRSPKDSETMISTSKENLIIAPQTTCLNESEPNRRLSSTTPFKTVFFCPSAMNVTTKRPKVKIPTVATSSEWLDFYNKKQQAKDLLEEQKIERLKQRNEAMIKKNETGKTAKVKKNLFENEPNLELERGAFVIFEYEKQYFPGLVVELLNSKLLISSMAMSGVGNWKWPDREDRLWYNVDDVIKVIKSPIAKNSRGEFSVPEMQSYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -