Gbil009169.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- bab1
- Assembly
- GCA_026546565.1
- Location
- JANSWN010024067.1:2223-4931[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8 2.2e+03 -1.3 0.0 15 26 144 155 142 155 0.92 2 3 7.5e-12 9e-09 35.1 0.0 4 45 405 446 402 446 0.92 3 3 0.044 54 3.8 0.8 4 20 582 597 581 597 0.93
Sequence Information
- Coding Sequence
- ATGGGCGGCGGCGTTGAAGGACAAACCTATTGCTTGCGATGGAACAATCACAAATCGAATTTGGTCGAAATTCTTGACGTACTCATCCAAAAGGAATGCTATGTCGATTGTACGATATATGTGGATGGGCAGGAGCAATTCAAAGCTCATCGTGTTGTGCTCGCAGCGAATTCACCATATTTTCAATCGATACTACAGGACGTACCGATGGACCACTGTAGTATTCTTGTGCCCGGTGTACAAGCTTTCGAAATGCGAGCACTCATCGAATACATGTACACCGGTGAGGTGAACGTTACTGAATCACAGATTCCACGAATCATGAAAATCGCTGAACAACTAGAGGTCAAAGGTCTATTTGATATGACCGATCTGAAGGGAAAATTCGAACGATTCGGTATAGCTAGCGCAACGTCAGCGAACGAAGATGGTGGTACCTCAACGGCAACGGCTGCCCATCATTATACGCACAACAGCAGTGTATCGAGTAATAACGGTGAGGGTAAATCACATCAAGCCTCGTCACCCATTATCACCACATCGACCACCAATATATCGTCGGCTCAGAGTAGCTCGTCACCGCCATACAATTACAAAATACCGTATGCAAGTTTGTTGCCCCAAGGTTTGGTGCCTTCATCGCTGAATAGTACAGTAACGGCCGATACAGCCACTGAACGATCTACACATCCGCCGCCTCCTTGGTCAGCAATGTCCGGACACCATCATCATCATCATCATCATCATTTGACATCACCGTTGCCAACGCTACCGCCGTTACCACCACCGCCACCACATTTACAAAATGCAGCCGCTGCCATGCTAAGTTCTGTGTACGAGTCCGGCTCCGACATGAACCCGTTGAAACGAAAAAAGATCTCTTCCATTACCAGTATGCTCATGTCACGTGATACACCAATTTTGCGTAACGTTTTAGCCCAATCAAATGTTGCCGATTCATCGCAACCGGTACTGCTGAGTACACCAATCATGAACGAACGCAGCGATCGGCACAGCAATCACTCCAACGGCACCGATTACTCCTCGGACAAGAAGATCAAATACGAAGAACCACATTCACCTTATACGGACAAATCCTTCGACGATGATACCATGGATCCTACACAAAATTATCCAACCGACTCGCGTATTGCGTCGTACGTGCCCCAACAGAAACCAGAATGGAAACGTTACAAACAATATACGCGATCTGATATTCTGTCGGCCATTGAATGCGTTCGCAATGGTATGAGCGCTCTAAAGGCATCCCGTCAATTTGGTGTACCATCGCGTACCCTCTACGATAAGGTGAAGAAGCTTGGCATAACTACTGGCCGTCCTATGAATCGCACCATGAAACGTAGCCCAagtaatggtggtggtggtggtggaaatggcggcggcggtaacggtggtggtggtggtggtggtggtggcggtggtgggggcggcggtgtcagcccagctggatttccatatggcatcagtggcaccagcagcCCCTATGGTCATCACCACGATAACAATCAACAATCGTATGGCGGTCACAATCAATCGTTAGGCCATCAACATCAAAACGATTCAGACGAACGTCACGATGATATGGACCGAAGCGATCGTGAACACAACATTCCTCCCACTATTTCACAGCCGGCCGCTGCTTTGTTGGACGCCCGCTTTTTACAGCATGCTCTCGAAGCTGGCGGTGGTGATATTGCCGGACGTGAAGCATTACATGCGATGGCATTCGCAGCGGCAGCTCATGCTGCCGTCAACGGTATGTCAACGAGTCCTGGCACACATGGTACAGCCCGTTCGCCAAGTCCTAGCCTATTAATGAAATTTGCCGCCCGTACGCCAGTACCAACGAGTTGTAGCCCATCGAATGGTAACTCTACCGATCGTGATCATCATATCATAACTCATCGTACGTTGCAACACGTATCCGACATAGACGATCGCCATCAACTTATGGACGACGACGACGACGACGATGACGATGATCATGTCGAAGATTTGTCTATGACAAAGAAAGAGgtagaagcagcggtcatcaagagcctaacaccatccgaaatgacctcaccacatcgtcaacaaatgacacctccgccacaacaacaacaacaacaacaacaacaacaacaacaactacaacagcagcaacatcagcaacaacaattacaacaacagcatcagcagcagcagcagcaaaagcaacaacagcagcaacaacaattacaacaattacaacaacagcagcaacagcagcagcagcaacaacagcagcagcaacaacagcagcagcaacagcagcaacatcagcaacagcagcaacaaaaacaacaattaccgccgccaccaccaccacctccaccacctccaccactaccaccgccaccaccaccaccaccactacaaccaccttcatcattatcatcatcatcatcatcatcatcctcatcatcatcatcttcatcatcatcaccatcaacatcacaaccagcacagcagctgggcgttattgtaccgccacAGACCAAGGTAATATCGCACAGTATCGAAGATAGTGTCTTGAACATGAAACGAGAGACAATAGCAACGAACGACGATGATCTCAATTAA
- Protein Sequence
- MGGGVEGQTYCLRWNNHKSNLVEILDVLIQKECYVDCTIYVDGQEQFKAHRVVLAANSPYFQSILQDVPMDHCSILVPGVQAFEMRALIEYMYTGEVNVTESQIPRIMKIAEQLEVKGLFDMTDLKGKFERFGIASATSANEDGGTSTATAAHHYTHNSSVSSNNGEGKSHQASSPIITTSTTNISSAQSSSSPPYNYKIPYASLLPQGLVPSSLNSTVTADTATERSTHPPPPWSAMSGHHHHHHHHHLTSPLPTLPPLPPPPPHLQNAAAAMLSSVYESGSDMNPLKRKKISSITSMLMSRDTPILRNVLAQSNVADSSQPVLLSTPIMNERSDRHSNHSNGTDYSSDKKIKYEEPHSPYTDKSFDDDTMDPTQNYPTDSRIASYVPQQKPEWKRYKQYTRSDILSAIECVRNGMSALKASRQFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNGGGGGGNGGGGNGGGGGGGGGGGGGGGVSPAGFPYGISGTSSPYGHHHDNNQQSYGGHNQSLGHQHQNDSDERHDDMDRSDREHNIPPTISQPAAALLDARFLQHALEAGGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSLLMKFAARTPVPTSCSPSNGNSTDRDHHIITHRTLQHVSDIDDRHQLMDDDDDDDDDDHVEDLSMTKKEVEAAVIKSLTPSEMTSPHRQQMTPPPQQQQQQQQQQQQLQQQQHQQQQLQQQHQQQQQQKQQQQQQQLQQLQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQKQQLPPPPPPPPPPPPLPPPPPPPPLQPPSSLSSSSSSSSSSSSSSSSSPSTSQPAQQLGVIVPPQTKVISHSIEDSVLNMKRETIATNDDDLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753863;
- 90% Identity
- iTF_00753863;
- 80% Identity
- iTF_00753863;