Gbil019455.1
Basic Information
- Insect
- Gnoriste bilineata
- Gene Symbol
- -
- Assembly
- GCA_026546565.1
- Location
- JANSWN010013643.1:10715-12052[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-06 0.0019 18.1 0.0 2 38 265 302 264 306 0.89 2 3 0.005 6.1 6.8 0.0 8 35 319 345 317 350 0.77 3 3 5.3e-10 6.4e-07 29.2 0.0 5 40 375 409 373 412 0.88
Sequence Information
- Coding Sequence
- ATGGAAACTGAAGAACATGTACAAAATGTTAAGTGGTTAGACTATGCGAAGAATATGATGGACATTCAGCGCAGCGTGTATCTCAGCAGTTCCATGTTCGATGTTATCATTGCGGCTGGAGAAATTCGTTTCAAAGCTCACCAAATCGTTCTGGTATCGTGCAGCGATTTTTTCGTAGACATCCTGAACAATTGTCCGAGCTTGGTTGTGCCTACAATTGTCATTCCTGATCTTAATCCCAAATTGGTCGTACCGCTGCTGGAATACATGTACACAGGTGAAACTTTCATTTCACCCAGTTCGCTTCCAGATTTCCTAGAGGTATGCGGCTATTTACAAATTAAAGGATTCTCTAACAATAAATGTTTGTTAAATGGCATGCCAATTGAAAAAAATCGATCGTACAAAATTGTTGAAACAGAAGCGTTTATCGATCAGCACCAATCAAAGCAATCGGCATTGGAAAACAAACACCATACAGAGTATATGTACGTGGAAGATGCTGAAAACATAATTGACTTGCGCGCTGTTGAGCCCAACATACAATCGGACCAAGCTAATGAGTTCGATCATAGCACCGTTGAGGAGTATCTCGAAGAAATCATTGAAGACAGTCTAGCCATCGACGATGTACAACCGCAATCGCAGCACAAAGACGACAATGTTACGCGAATGTTACCAAATTCTTCTTCGAACTCAATGTATCCCATCTTAATTATCAAAGCAAAATCAAAGAAATCAACGCCCGCAAAACAGGAAGGAGCCAAGCGTCTAGTCAACAATACGGTGCGTAATAATGCGCTGGAGAATGCAGTGCGTTCGGTCACCGAGGATGGTAAAAGTTTGAAAGAGGCCAGCGTAATGCATAACATCTCAAAAACAGTATTGTGGCGTAAACTGAAGCAATCATCATTGTACAAACCCGAAGAACGAACGCGTGCTATACGAAGCGATGCAATTGCTGCAATGCAACGTGGCGAAACGCTCATCAGTATATCAAAACAGTACAATGTGCCGCTATCGACGTTGCATCGGGATAAGGTGCGGCTATTCGCTCAAGGTAAACTGCCCAAAGATTGCAAGGTAACGCGACGAGAAGCTGGCCCGGCATACAAAAGTCGATTAAAAAAAGCTGTGGCCTGTTGCGAGAAAGGTATGTCACAAAAGGTGGCAGCTGAAATGCACGGAGTTCCAAAAACAACGATATGGAGGCATTTGCAGCAACAGAACAAGGCGGTAGCCACTTATGTGGCGGACACAGATAGTGAGGAACAATCTGGCAGCAATGATACTAATATCCAATTTAGTGAAACTAAAATGGCTGGTTCTAGTAATTAA
- Protein Sequence
- METEEHVQNVKWLDYAKNMMDIQRSVYLSSSMFDVIIAAGEIRFKAHQIVLVSCSDFFVDILNNCPSLVVPTIVIPDLNPKLVVPLLEYMYTGETFISPSSLPDFLEVCGYLQIKGFSNNKCLLNGMPIEKNRSYKIVETEAFIDQHQSKQSALENKHHTEYMYVEDAENIIDLRAVEPNIQSDQANEFDHSTVEEYLEEIIEDSLAIDDVQPQSQHKDDNVTRMLPNSSSNSMYPILIIKAKSKKSTPAKQEGAKRLVNNTVRNNALENAVRSVTEDGKSLKEASVMHNISKTVLWRKLKQSSLYKPEERTRAIRSDAIAAMQRGETLISISKQYNVPLSTLHRDKVRLFAQGKLPKDCKVTRREAGPAYKSRLKKAVACCEKGMSQKVAAEMHGVPKTTIWRHLQQQNKAVATYVADTDSEEQSGSNDTNIQFSETKMAGSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00753888;
- 90% Identity
- iTF_00753888;
- 80% Identity
- iTF_00753888;