Basic Information

Gene Symbol
kn
Assembly
GCA_026546565.1
Location
JANSWN010035679.1:6605-14456[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-90 1.8e-86 290.9 0.1 249 385 7 143 2 147 0.98
2 2 2e-09 2.1e-05 23.2 13.9 422 512 146 241 142 265 0.59

Sequence Information

Coding Sequence
TTGTATCCACCATTACCAGTAGCCACACCGTGTATAAAAGCTATATCACCGGCCGAGGGCTGGACGAATGGCGGCGCACAGGTCATCATCGTCGGTGACAACTTCTTTGATGGATTACAAGTGGTGTTTGGCACGATGCTCGTATGGAGTGAGTTAATTACTTCACATGCCATTCGGGTGCAAACTCCACCGCGTAGTATCCCTGGCGTTGTTGAAGTGACACTGTCCTACAAAAGTAAACAATTCTGCAAAGGATCACCGGGTCGATTCGTTTATGTTTCTTTAACTGAGCCAAACATAGACTATGGCTTTCAGCGTTTACAAAAATTAATACCACGTCATCCAGGTGATCCTGATAAGCTTGCCAAAGAAACAATTCTGAAGCGTGCTGTGGATCTGGTCGAAGCACTGTATTCAATGCCAAGAAGTCCGGGCGGCTCATCCGGATTTAATTCGTATACTGGTCAGTTGGCAGTCAGTGTTCAGGATGGTAGTGCTCAGTGGGTCGAAGATGAGTACCAGCGAGCGCAAAGCAGTAGCGTCAGTCCACGAGGTTATTGCAGCAGTGCATCGACACCACATTCATCGGGCGGTGGATCATATGGGGGTGGTGGTGGTGGTGGTGGTGGTACTGTAAACGGCTATGGACCTAACTTGGGCCTATCATCGTCACCAGCTAGCGTTTTTAATTCCACGTCAAGAGTCAGTGGTTTGGTCAGCAGCTTTAATCCATTTACACTGCCAACATGTGGAACCCAAGGTTACACTCCCAGTTCGCTCGTCTCATCGTCAAAATAG
Protein Sequence
LYPPLPVATPCIKAISPAEGWTNGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRSIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPNIDYGFQRLQKLIPRHPGDPDKLAKETILKRAVDLVEALYSMPRSPGGSSGFNSYTGQLAVSVQDGSAQWVEDEYQRAQSSSVSPRGYCSSASTPHSSGGGSYGGGGGGGGGTVNGYGPNLGLSSSPASVFNSTSRVSGLVSSFNPFTLPTCGTQGYTPSSLVSSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00753527;
90% Identity
iTF_00753527;
80% Identity
iTF_00753527;