Basic Information

Gene Symbol
ARID2
Assembly
GCA_026546565.1
Location
JANSWN010000512.1:4881-8532[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-26 6e-23 81.2 0.0 2 89 49 134 48 134 0.95
2 2 1.4 4.2e+03 -1.6 0.5 3 31 630 662 628 664 0.64

Sequence Information

Coding Sequence
ATGGACGTGTCTCAAGGAAATGTGTCCATGTCGTCGACGAACGATGACTCGATGAGTTCACTGACCAAACAACAACCGTGGAATAGGAAAGTGGGCCCCGTCGCTGCCGGAACCATCAAAGTTGAACAAAACCACCCAGAGGATCGTAGTACATTTTACAATGACTTGTACCAATTCCATGAGAACAAAGGCACTCCAATTCCGCGGTTGCCCAAAATCAACGGCCACGAAATTGACTTACACAAATTGTATATTCTGGTTACGCAGCGTGGCGGATGGGGCAAGGTAAACTATCGTAACGAATGGGACGATTTGGTTGAAGATTTCAACATTTCTCGAAAATGTGTGAACGCTTCAGTAGCGCTGAAGCAAGTGTATATGCGATATTTGGACAGGTATGAAAAAATTCATTTTTTGGGTGAAAACAACGAGCGAACGGATGACGGTGAAGACGAAAATCGTCACAAGAAATGGAATGACAAAAGTCATAACGAAATACCATTGAAGTATAATTACAGTCAACACATGGTGCCTGACGGGCTACGAATAATCCATAAGCTATCGACAGATCTGTACAAATCCTCCGAGTATGACCGATTGATAATGTCGTTGATGTCACCATTACCCAATGAGCAAGACTTTGCCATTAATGTGTGCACATTGATGTCCAACGAAAGCCAACATACGTTGAAAATTGAAAATTGTCCGAAACTATTGGAGGTCCTCCTTGGTCACGCTGGTGTCTATTCGCATTTCACATTGCGAGTGATTTTCATCGAATTTTACTCGAAAGTTCGACGGAATTCTTTGCAAGCGTTCTGGACAGATTGCCTTCACGACAAACCCGAAATATTGGAGTTATCGTACGACGACTACTATCAATCGCCTGACGAGAAACTTGAAGTTGATGGTTTGCTCGAGCATGCAGCTCCACTATCATCGGCGATACAAAACAAACGAAAATCGAATGAAAATTCTTTCGAAGACGGTTTGAATGCAGATGACAGTGACAATGAATTGGACACCGGCAGCAGTTTGGAATTCTTAAATCTTCGACGTGGGCTTGGTACGCATGATTACATCGGTCAGCGTGTTCATCAAGTGGCTTCAATCATTCGCAACCTAACGTTTATCGATGAGAATTTACCGACATTGGTGCGCAACCGTTCGTTTATTCGTTTTCTGGTCATGTGCTCAAATATCCGATGGGGAAATTTACGTCACATGGCGCTTGACATGTTGGGTAATGTTGCACCAGAAATTGAGCTCAGCGATCCGGCCTCTGATGATTTGACACGCTGCATGCTATCCACTATTTGCGATGGGCTTGAATCAACTGATCGTGGCGTCATTATTAGTTCATTAGAAGTACTTTATAAGCTATGCCAAAAGGAAAGCAATGAAGACTATTTGCACAAGTGTCTCAATAAGAAAACGTACGCGCAAATTTGTCTATTGCTTTCGCTGAACGATATTATGCTGCTACTGTACACTTTGGAATGCATTTTTGCATTAACATCACTGGGCGAAAAATCTTGCTCGACCATAATGCTAGTGAGCGGAATCATAGATTCGCTCGTTTCGTTGGTCACCGTTGAGGCTCAAAGTTACGGTCAAAATGGATGTATCTTGATGCGAGTGGTCGAAACGGTACCGTCAAGCGTTATGCAATCAACAGCCACAGCTGCTAATTCATCGTCTCAATCGAACTCTCAAATGCATAACCAATCAAATCAGATAGCAACAACATTGCATACAATGTCATCAGTGCAGCTGAACCAAAATAATACCAGTCAAACGGAAATGATAACGGCCAACACATTTGCCACCTTCACCACTACCGATCCACAAAAAACTGCTCCCATACTAagtgctccggttcagcaacaaattttccaacaatccgtccgaaatgttgtgcagcagcagcagcagcagcagcagcaggctcttccatctacacccgttgtgcaacagaagcaagtaatTATGTCACCACCTAGTGTAAATACGGTCAAAACGGAGCCAGCTAATGCTATCATGACATCGTCATTCACGACTGGCAAATACGGTCAACAGCAAACGATCCAAGAGAACGAACAATTTGCACTTGCCTGGTTGAGAGCCACATTCGAACCGATTGTAACCAATGCCAGTCGTATCGAACAACATGATCTTTATAAAATGTACATAACAGCCAGCTCTAAAATGGGTCGAGTTGGTGTCGTATCACCAATGCATTTTCCACGTTGCGTTCGCAATGTATTCGGCGGTAACATTGGACCGAATGCGGTCAAGGTAAAGCAGCAGCACAACAATACCGAAACGACTGTACTATACTACGAAGGCATTCGTATTAGAGCGAAACCATTAGCCGTCATTCACAAAGGAACAATACTACAAGGTCAAGTGCAACATCAAACGGTCGACAAAAAAGCCGAGACCATCCCTGTTAAAATGGTTATCAACCAAACACAACACATGGTCGTTCAACAGAATCCACAGCCCGCCAAATCTACAATAACTGCCCAGATTGTCCCAAAGACGAACGTGTTAAACAATCAAACTGGCGAAACTATGGTGGTGATGACACAGAATCCATTGCACAAAAATACTGTTACAAGCCCGACGCATCAGCAGCATATTGGTGGTAAAATGCCAATGCATCAGCAGCACAGTGTCGTCGTTGTAAGTAGCAGTAGTGGCCAATCAACCGCAGTGAGTAACAGTTTATCATCAAACGCGACGGTGCCAACGATTGCGACTTCATCAATCGTACAATCTACATCGTCGTCGCTGATTAAGAGCCTGTTGGCCAACAAGGTAACATCTCCAGGTGCTGATAGTAACGCATCAGCTGCATCAACCGCTAGCCCAACTACCACTAGTCTGATTGCAACGAATGTAAATGTGCGTCAGGTAACACCCGTTTTGTTTTTGCTTTTTCAATACTAA
Protein Sequence
MDVSQGNVSMSSTNDDSMSSLTKQQPWNRKVGPVAAGTIKVEQNHPEDRSTFYNDLYQFHENKGTPIPRLPKINGHEIDLHKLYILVTQRGGWGKVNYRNEWDDLVEDFNISRKCVNASVALKQVYMRYLDRYEKIHFLGENNERTDDGEDENRHKKWNDKSHNEIPLKYNYSQHMVPDGLRIIHKLSTDLYKSSEYDRLIMSLMSPLPNEQDFAINVCTLMSNESQHTLKIENCPKLLEVLLGHAGVYSHFTLRVIFIEFYSKVRRNSLQAFWTDCLHDKPEILELSYDDYYQSPDEKLEVDGLLEHAAPLSSAIQNKRKSNENSFEDGLNADDSDNELDTGSSLEFLNLRRGLGTHDYIGQRVHQVASIIRNLTFIDENLPTLVRNRSFIRFLVMCSNIRWGNLRHMALDMLGNVAPEIELSDPASDDLTRCMLSTICDGLESTDRGVIISSLEVLYKLCQKESNEDYLHKCLNKKTYAQICLLLSLNDIMLLLYTLECIFALTSLGEKSCSTIMLVSGIIDSLVSLVTVEAQSYGQNGCILMRVVETVPSSVMQSTATAANSSSQSNSQMHNQSNQIATTLHTMSSVQLNQNNTSQTEMITANTFATFTTTDPQKTAPILSAPVQQQIFQQSVRNVVQQQQQQQQQALPSTPVVQQKQVIMSPPSVNTVKTEPANAIMTSSFTTGKYGQQQTIQENEQFALAWLRATFEPIVTNASRIEQHDLYKMYITASSKMGRVGVVSPMHFPRCVRNVFGGNIGPNAVKVKQQHNNTETTVLYYEGIRIRAKPLAVIHKGTILQGQVQHQTVDKKAETIPVKMVINQTQHMVVQQNPQPAKSTITAQIVPKTNVLNNQTGETMVVMTQNPLHKNTVTSPTHQQHIGGKMPMHQQHSVVVVSSSSGQSTAVSNSLSSNATVPTIATSSIVQSTSSSLIKSLLANKVTSPGADSNASAASTASPTTTSLIATNVNVRQVTPVLFLLFQY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-