Basic Information

Gene Symbol
tfcp2
Assembly
GCA_026546565.1
Location
JANSWN010023031.1:1-3762[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-52 3.5e-48 164.0 0.1 29 184 7 159 2 164 0.93
2 2 4.5e-14 4.6e-10 39.3 0.1 184 221 196 233 179 235 0.82

Sequence Information

Coding Sequence
CCCGTTTCTCTTATATATAGATTTCAATACGTCCTTGCTGCGTCCACCTCGATTGCCACCAAAAACAACGAAGACACGCTCACCTATTTGAACCAGGGACAAAGCTATGAAATTAAGCTAAAAAAACTTGGCGATCTATCAACGTATCGTGGCAAAGTCTTGAAGAGTGTGATTAAAATCTGCTTCCACGAGCGTCGTTTGCAATATATGGAAAAAGAGCAAATGTTGCAGTGGCAAAACTCACGGCCTGGCGAGCGTATCGTCGAAATCGATGTACCATTATCATACGGCCTATGCCAAGTGGCCCAATCGAACTGTCCGAAAATGATGAATACTGTCGAAGTACTATGGGATCCTATGAAGGAAGTCGGTGTTTACATTCAAGTCAATTGCATATCAACGGAATTTACCCCAAAGAAACATGGAGGCGAAAAAGGTGTGCCATTCCGCATACAAGTGGAAACATATTtggagaatgctagcccaacagtgggcggtggtggtggtggtaatagtagtaatggagctggtgttggtagtggtatcggtggaatttccagtatcacTTCGGCCATTACGGAAACGGGTTCGGGATCACTTAAGTTGATCCATGCGGCCGCCTGTCAAATCAAGGTTTTTAAACTAAAAGGAGCTGATCGGAAGCATAAACAAGATCGAGAGAAAATTCAAAAGCGAACGCTGACCGAACAGGAAAAGTTTCAGCCCAGCTACGAATGTACCATTCTAACGGATATACCGATCGATTCGATTGTACCGCAGGGTGGATACACTCCAGAGCATGTGACCGGACGATCTGGCAATACTTCTCCGTTCAAAGTGCATTCACCGGTACCGGTAGTGAACAAATTCGAAAGCGTAATGTTCAATACGAACTCCAGCAATCCAATCGGCATCAATAGCGTATCATCGTCTAATTCGAATTTGAAAATCGATCAAAACACTTTGTCACCGAAACAGGTTGACGCTGATGAATATACGCCAAACATTGTGAAAGATTCAACACCGAGTGAACTGTCCAAATGGATGAATCATCATCGATTGGGACAACACATCTCTACGTTCACACATTTCACTGGTGCCGATTTGTTGCGTATGTCAAAGGAGGATATCATTCATATTTGTGGTATTGCCGATGGTATTCGCATGTACAATACCATTCATTTGAAAGCTATAACACCCAGGTTAACGATATACGTGAGCCTCGATGGTAATTCATACCATGCCATATATTTGCATGCCAACAATACTCTTGAGCTGGCTCAAAAACTAAGTAAGCTGCCCGGATTCTACGAGAATTACAATAATAACAGTCCGAACGGTTTTCAATCGAAATTTTCAGGTAATAATAATAACACGCATGGCATCTATGATGCTAACAAGCTGTCAGTGTACGTACACGGACCGGCCGGTATACATGTACTGGTCACCGATGAGGTGCTCAACAACATCAAAGATGATAGCCTGTTCGTGCTGGACATTAAAAATACTAAAGTCCTCATGAAAGCCGTCTACAAAAACGAACTCAATTGA
Protein Sequence
PVSLIYRFQYVLAASTSIATKNNEDTLTYLNQGQSYEIKLKKLGDLSTYRGKVLKSVIKICFHERRLQYMEKEQMLQWQNSRPGERIVEIDVPLSYGLCQVAQSNCPKMMNTVEVLWDPMKEVGVYIQVNCISTEFTPKKHGGEKGVPFRIQVETYLENASPTVGGGGGGNSSNGAGVGSGIGGISSITSAITETGSGSLKLIHAAACQIKVFKLKGADRKHKQDREKIQKRTLTEQEKFQPSYECTILTDIPIDSIVPQGGYTPEHVTGRSGNTSPFKVHSPVPVVNKFESVMFNTNSSNPIGINSVSSSNSNLKIDQNTLSPKQVDADEYTPNIVKDSTPSELSKWMNHHRLGQHISTFTHFTGADLLRMSKEDIIHICGIADGIRMYNTIHLKAITPRLTIYVSLDGNSYHAIYLHANNTLELAQKLSKLPGFYENYNNNSPNGFQSKFSGNNNNTHGIYDANKLSVYVHGPAGIHVLVTDEVLNNIKDDSLFVLDIKNTKVLMKAVYKNELN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-