Gcor010318.2
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- pnr
- Assembly
- GCA_029298725.1
- Location
- CM055513.1:19596326-19604851[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 3.1e-14 52.6 2.3 1 35 287 320 287 321 0.97 2 2 1e-17 2.1e-14 53.2 6.4 1 35 344 377 344 378 0.98
Sequence Information
- Coding Sequence
- ATGGAGCCGAATCAATCGCCGCCTTCAGCAGACATCAAACCGAAAATTGAAGAACCTGAAAACGAACAGCCTCCACCGAGTGTTATTATAAGAAGACCGATTATAACAACAGCGGGAACTATAGAAGAGTCTCCGGATGAAGCGAGGATTGAACAGATCGCCGGAGAAGAGATTGTGAAGACTTCAGAGTCGCCCGAGCAACAAGCGGAAGAAGGAGCCCAGCAGATTGTGCATTACGAAGAAGGTACCACCGAGCAAAGCTATGAAGAGTCTGGACAGCAAGTGTATGTGACTGAAGGTGTGATCACTACGGAGAGTTTCGTCACCCAGAATGAGTACCATCAACAACCTGTTGCTTACACTACTTTGGACATGCCAACAAATACTTCGATTGCGATAGATTCGGCAGAGTACGCGGATTTGGACAATGTCAACAATCCTCATTATAGTGGACAGTACGCGAATGATGCCAGTCAGTACTTGCAGCACCACCAGTACCAGAGTCAGTATTCTAATTACACGGTGGATAGAGCAGGAGCTGAAAGTCCACCGACTGCTCTCTTTAGAGATACTGATCCTAATCTTGCCTCATCGAGATATCAGACCTTCGAAGTGCAAAATGCCAGCGTTAACAACCAAGTAACACTACTAGGCGCAAACGGAGCCTCGTACTCATACCCCGCTCAAAACCCACCGTGGCCAAATTCTGGTGGCACTGAGTTCCAGTACCAACAGACCGTACCACTTCACCAACCAGATAGTACCCAAAGTTTTTCGAGTATACCATCGACTTGGCCTAACAGTTCGTCCGTCGAGGATTCTTCTAGAGCACCATATCGAGAGGTACATATCAAAGAATGCGTGAATTGCGGTGCCAGTGTTACTCCTCTTTGGCGTAGAGATGGTACCGGTCACTATCTCTGTAATGCTTGCGGTCTGTATAACAAAATTAATGGTGTTAATAGACCGCCAGTGAGGCCAACCAAAAAACCACAGGCGCAGACGGGACCAAGACGAAACGGCGTTAATTGCGCCAACTGCAAAACTGGCACCACCACGCTCTGGAGGAGGAACAATCAGGGAGAGCCCGTTTGCAATGCTTGTGGACTCTATTACAAGCTACACGGGGTGAACAGACCTCTGAGCATGAAAAAGGAAGGAATACAAACGAGGAAACGAAGACCAAAGAACTCCAACTCGCACAGCCAATCAAGTCCGAGTACTAGTCAAACAGTCAACAATCGAATGGTTATTCATGGCTACTACCCCCCTCAACAAGATATGGTACCTGACCAGTACCAACTTCCGCCAACTGCAGGGATGTTTCAAACCAATCAGTTTCATCAAAGGCTTCCCGGTGCGGAGCAGTTGGCACGACAAATAAACAcaaaCGTAGCTCCCTTGGAGCCCATTCAAGTCGCACCAGATGAACAAACAAGTGTTATCACCTCAACATCACAAAATTCGAGATATCGCCGCCAAggtgaagaagaagaagaagatccTAACAACGCTTAA
- Protein Sequence
- MEPNQSPPSADIKPKIEEPENEQPPPSVIIRRPIITTAGTIEESPDEARIEQIAGEEIVKTSESPEQQAEEGAQQIVHYEEGTTEQSYEESGQQVYVTEGVITTESFVTQNEYHQQPVAYTTLDMPTNTSIAIDSAEYADLDNVNNPHYSGQYANDASQYLQHHQYQSQYSNYTVDRAGAESPPTALFRDTDPNLASSRYQTFEVQNASVNNQVTLLGANGASYSYPAQNPPWPNSGGTEFQYQQTVPLHQPDSTQSFSSIPSTWPNSSSVEDSSRAPYREVHIKECVNCGASVTPLWRRDGTGHYLCNACGLYNKINGVNRPPVRPTKKPQAQTGPRRNGVNCANCKTGTTTLWRRNNQGEPVCNACGLYYKLHGVNRPLSMKKEGIQTRKRRPKNSNSHSQSSPSTSQTVNNRMVIHGYYPPQQDMVPDQYQLPPTAGMFQTNQFHQRLPGAEQLARQINTNVAPLEPIQVAPDEQTSVITSTSQNSRYRRQGEEEEEDPNNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00415565;
- 90% Identity
- -
- 80% Identity
- -