Gcor010317.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- gata5-a
- Assembly
- GCA_029298725.1
- Location
- CM055513.1:19579481-19589076[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-18 1.1e-14 54.1 2.7 1 34 145 177 145 179 0.97 2 2 4e-19 8.4e-16 57.6 4.4 1 35 199 232 199 233 0.98
Sequence Information
- Coding Sequence
- atggatttaaattttttacaagccAAtACTTTGTATTCCCGGAACACGAGTAGTTACACCGGAGCGATGCCTTACTATGGAACAGGATCGCCGGAATTATCCTCGCAGTCCTCCCAACTGTGGACAAATTCAGGGATAAACAGCAACGCTGGTTTGGTTCTCGCTGATGACTACCCCAAGGTGACTTCTTCGACGACTCTTCCTGGGTTCAACAGACTTCCACCCCTTCACAGTAACTCTCACCATCGGAGTACATCTTACCCCGTGGCCACGTCGACGAATTACAACGAATGGCAATATTCAGAGCCTTCCAGTACTCTTCAATACAACATCCTGAGTTCTGGAGGTGCCCGGAATCGCCCCTTGTCGGCGTCGGCGTCATTGTCAGCAAtagACCCTCGTACTGCCGAGTACTTTACCGAGGGACGAGAATGTGTGAACTGCGGTGCCATCGACACACCTTTATGGCGAAGAGATGGTACTGGCCATTACTTGTGCAATGCTTGTGGCCTGTACCATAAGATGAACGGCATGAACCGGCCCCTTGTGAAGCAGCCTCGTAGATTGTCCGCGTCACGAAGAGTTGGGCTAACTTGCACGAACTGCCACACGAGCACCACGTCGCTGTGGCGAAGAAACACCGTCGGAGAGCCAGTTTGCAACGCCTGCGGGCTTTATTTCAAGCTGCATGGCGTGAACAGGCCTTTAGCCATGAAGAAGGACAGCATTCAGACCCGAAAGCGAAAGCCCAAGGGTAGTAAAGACAGCACCCGGGCGTCGATCGCCTTAGAATCAACAATCAACAATATCAAACTAGAGCAGAGCTTGCCGTCCGTGAAACTGGAACATTCCACTTTAGATAACTACAACGAGTTGCGATCTGCCACTCTCAATCACATGCAACACAACTCTTCTTCGAATTATGTCTACAATAATCAGTCTCATACAAGAATGTCTCCTTACACATCCCAGCCCTCGCAAATGACCAATAGTTACTTTGATATTCTTCAACATGCGAGTCCGAGCCCGCCATCGACGGGTTCTTCGAGTCCGACGACTCCGCTTCTTgcaaacaataataacaataacacaAAAGTTATAATGAATGGGGAGAATATTAATAATATGGACAGACCAACTGTGGTGTCTTTATCCTCATAA
- Protein Sequence
- MDLNFLQANTLYSRNTSSYTGAMPYYGTGSPELSSQSSQLWTNSGINSNAGLVLADDYPKVTSSTTLPGFNRLPPLHSNSHHRSTSYPVATSTNYNEWQYSEPSSTLQYNILSSGGARNRPLSASASLSAIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNTVGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSKDSTRASIALESTINNIKLEQSLPSVKLEHSTLDNYNELRSATLNHMQHNSSSNYVYNNQSHTRMSPYTSQPSQMTNSYFDILQHASPSPPSTGSSSPTTPLLANNNNNNTKVIMNGENINNMDRPTVVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410447;
- 90% Identity
- -
- 80% Identity
- -