Basic Information

Insect: Gnatocerus cornutus
Gene Symbol: ECU03_0790
Assembly: GCA_029298725.1
Location: CM055509.1:16386500-16393227[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.091 7.2 7.6 1.6 1 23 71 93 71 93 0.99

2 14 0.27 21 6.1 0.4 5 20 102 117 99 118 0.90

3 14 3.7e-05 0.003 18.3 0.5 1 23 130 152 130 152 0.97

4 14 0.00034 0.027 15.3 0.4 3 23 157 178 156 178 0.93

5 14 0.0024 0.19 12.6 6.1 1 23 187 209 187 209 0.99

6 14 0.0011 0.086 13.7 1.7 1 23 242 264 242 264 0.98

7 14 6.7 5.3e+02 1.8 1.3 1 23 267 290 267 290 0.84

8 14 0.00018 0.015 16.1 2.8 1 23 299 321 299 321 0.98

9 14 0.0016 0.13 13.1 2.5 3 19 330 346 328 352 0.92

10 14 4.6e-06 0.00036 21.2 1.9 2 23 363 385 362 385 0.95

11 14 0.056 4.4 8.3 6.2 2 23 393 414 392 414 0.96

12 14 3.7e-05 0.0029 18.3 1.7 1 23 421 444 421 444 0.95

13 14 5.6e-08 4.4e-06 27.2 2.1 1 23 450 472 450 472 0.98

14 14 0.00035 0.027 15.3 6.2 1 23 478 501 478 501 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.091	7.2	7.6	1.6	1	23	71	93	71	93	0.99
2	14	0.27	21	6.1	0.4	5	20	102	117	99	118	0.90
3	14	3.7e-05	0.003	18.3	0.5	1	23	130	152	130	152	0.97
4	14	0.00034	0.027	15.3	0.4	3	23	157	178	156	178	0.93
5	14	0.0024	0.19	12.6	6.1	1	23	187	209	187	209	0.99
6	14	0.0011	0.086	13.7	1.7	1	23	242	264	242	264	0.98
7	14	6.7	5.3e+02	1.8	1.3	1	23	267	290	267	290	0.84
8	14	0.00018	0.015	16.1	2.8	1	23	299	321	299	321	0.98
9	14	0.0016	0.13	13.1	2.5	3	19	330	346	328	352	0.92
10	14	4.6e-06	0.00036	21.2	1.9	2	23	363	385	362	385	0.95
11	14	0.056	4.4	8.3	6.2	2	23	393	414	392	414	0.96
12	14	3.7e-05	0.0029	18.3	1.7	1	23	421	444	421	444	0.95
13	14	5.6e-08	4.4e-06	27.2	2.1	1	23	450	472	450	472	0.98
14	14	0.00035	0.027	15.3	6.2	1	23	478	501	478	501	0.91

Sequence Information

Coding Sequence: ATGCGCCACGTGAAACTCCCCGGCCGCAAAATCGCCACCATAAAAAATCAGATTGGGGGCATCCTCCAACAACTCAACAAATTCGACGAAAGCGAGAAAACGGAGGTGGTGTCGTACATCCAGAGCTACATCAACGAAGACACCAAAAGGCCCCTTTTGAGGAAGAAAAGACTCCGCTTGTTCAAGCCCCCCAACTTGAAACGCGTCGTGTACAAATGTCGCGTGTGCGACGTCCGAGAAAAAACGAAGAAGGTGATGCTGAAGCACATGCAGACACACGTGGGGGCCCCTCGTTCCTGTATTAGATGCAAAAAGACGTTTAATGGGAGCGCCGCGTTCAAGTGGCACCAAAGTTGCTATTGCGCCGTTGCGTTGAAGAAGATGAGGTACACGTGCAGCATGTGTCCTCGAGAGTTTATCTCGAAACGGACTCTGCAGAGCCACGTGCAAGGCCACAAACGGAATAACTGCGCGTACTGCGAGAAGGTCTTGACCAGGAGGAAGCAGCTCATTCGGCATTTGTTGGAGGAGCATTCTATCAGACTTGAGCGGGACACGTATAAATGCGACTACTGTGAGAAGAGATACATCAAAAAGTGCTCCCTCTACTACCACTTAAGACAGCACCTCCCGGACAAGTGCGTCTGCCTGGAATGCGGCAAGATCGACAACACcatagaagaagaagaagaacacAAGCGCCAACACGACCTCCAGAAGCACTTCACCTGTGCAACCTGCGGAGACAAGTTCTCGCGGCGCCAACAATACCTCTGGCATTTAAAACGCCACAACCAATACAAATGCGTGACGTGCAACGAGAGCCACGCCTCCCGCACCAAGGCGATCAAGCACAAACAAGACGGGCACGAAGTGGAGGGACTCGAGCCGCGGTTTATTTGCCCCCATTGCCCCCTGGCGTTCCACCGGGAGAGTCGGTTTCTTGTCCACATGAGGAAGCACACTGAAGAAAACAGAAATGTCAACTGCAAGTACTGTAAGAAGACGTTCAGCTCTCCGTACGCCTACTACAAGCATTGCATTACGATCAATCACGAGAAATTCAGTCCGGAGATCAACGACATCGTTTGCAACAAGTGCGGGAAGCATTTCGCGAAACGTTACGATCTGAGGCAGCACATGTATCGCGTTCATAACGTCTCGAAGGAGTTCGTTTCGTGTCAGCACTGCCAGTACAGGACGGTGCACAAGTGTAATATGGAGAGACACATGGCGCTGCATTACAGGAGGGAGAACCAGTACACGTGCGAGTACTGCGGCAAGAGCTGCGACAGCATTTCCAGTTTGAATGATCACATTACTTACAATCATGTGCAGACAAAACAATTCAAATGCGACAAATGCGACAAATCCTTCAAACGAAACTCGGAATTAGTCCGCCACCAAGACAGCCACTCCGACGAACGCCCCCACGTCTGCACCCTCTGCGGCAAATCCTACAAAAGAACAAACCACCTAAAACGTCACGAGCATCAAGCGCACCAGATTGTGAAGGAGTCGCGAAGAATCAAGAAAATCGCAACGGAAGAACCAGAGGAGAAACCGGACGAAGAACAAATTTCGATAATTGGAGTTTTGGAGCAACAGGAAGTCATGTTGACTTTCCCAGGAAGTCTCGAAATGAGCGCCGGAAGTAACGAGCAGTTTGGGTACTTTTTACCAGATAAAGGGTGGAGCGTCAATGAGGAGCTGTGCAAAGTGTACAAAGATGTGTCGTTCGGCTTTGGGGGTCAGGGGGGTAGTTAA
Protein Sequence: MRHVKLPGRKIATIKNQIGGILQQLNKFDESEKTEVVSYIQSYINEDTKRPLLRKKRLRLFKPPNLKRVVYKCRVCDVREKTKKVMLKHMQTHVGAPRSCIRCKKTFNGSAAFKWHQSCYCAVALKKMRYTCSMCPREFISKRTLQSHVQGHKRNNCAYCEKVLTRRKQLIRHLLEEHSIRLERDTYKCDYCEKRYIKKCSLYYHLRQHLPDKCVCLECGKIDNTIEEEEEHKRQHDLQKHFTCATCGDKFSRRQQYLWHLKRHNQYKCVTCNESHASRTKAIKHKQDGHEVEGLEPRFICPHCPLAFHRESRFLVHMRKHTEENRNVNCKYCKKTFSSPYAYYKHCITINHEKFSPEINDIVCNKCGKHFAKRYDLRQHMYRVHNVSKEFVSCQHCQYRTVHKCNMERHMALHYRRENQYTCEYCGKSCDSISSLNDHITYNHVQTKQFKCDKCDKSFKRNSELVRHQDSHSDERPHVCTLCGKSYKRTNHLKRHEHQAHQIVKESRRIKKIATEEPEEKPDEEQISIIGVLEQQEVMLTFPGSLEMSAGSNEQFGYFLPDKGWSVNEELCKVYKDVSFGFGGQGGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00415362;
90% Identity: -
80% Identity: -