Basic Information

Insect: Gnatocerus cornutus
Gene Symbol: Zfpm1
Assembly: GCA_029298725.1
Location: CM055514.1:17866811-17869681[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4 3.2e+02 2.5 0.1 2 23 7 28 6 28 0.92

2 15 9.6 7.6e+02 1.3 1.2 1 11 473 483 473 496 0.82

3 15 0.27 21 6.2 0.2 2 23 576 598 575 598 0.95

4 15 0.013 1 10.3 2.1 1 23 606 628 606 628 0.98

5 15 4e-05 0.0031 18.2 1.1 2 23 631 652 630 652 0.97

6 15 0.0023 0.18 12.7 1.1 1 23 658 680 658 680 0.98

7 15 7.4e-06 0.00059 20.5 4.1 2 23 687 708 686 709 0.95

8 15 1.4 1.1e+02 3.9 2.1 6 23 723 740 721 740 0.95

9 15 9.1e-05 0.0072 17.1 4.5 2 23 746 768 745 768 0.96

10 15 0.022 1.7 9.6 0.0 2 23 784 804 783 804 0.96

11 15 0.00017 0.013 16.2 1.3 1 20 810 829 810 832 0.92

12 15 0.0001 0.0082 16.9 0.2 1 23 840 862 840 862 0.99

13 15 0.00082 0.065 14.1 3.7 1 23 868 890 868 890 0.98

14 15 4.5e-07 3.6e-05 24.3 4.0 1 23 896 918 896 918 0.98

15 15 0.0013 0.1 13.4 7.0 1 23 924 946 924 947 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4	3.2e+02	2.5	0.1	2	23	7	28	6	28	0.92
2	15	9.6	7.6e+02	1.3	1.2	1	11	473	483	473	496	0.82
3	15	0.27	21	6.2	0.2	2	23	576	598	575	598	0.95
4	15	0.013	1	10.3	2.1	1	23	606	628	606	628	0.98
5	15	4e-05	0.0031	18.2	1.1	2	23	631	652	630	652	0.97
6	15	0.0023	0.18	12.7	1.1	1	23	658	680	658	680	0.98
7	15	7.4e-06	0.00059	20.5	4.1	2	23	687	708	686	709	0.95
8	15	1.4	1.1e+02	3.9	2.1	6	23	723	740	721	740	0.95
9	15	9.1e-05	0.0072	17.1	4.5	2	23	746	768	745	768	0.96
10	15	0.022	1.7	9.6	0.0	2	23	784	804	783	804	0.96
11	15	0.00017	0.013	16.2	1.3	1	20	810	829	810	832	0.92
12	15	0.0001	0.0082	16.9	0.2	1	23	840	862	840	862	0.99
13	15	0.00082	0.065	14.1	3.7	1	23	868	890	868	890	0.98
14	15	4.5e-07	3.6e-05	24.3	4.0	1	23	896	918	896	918	0.98
15	15	0.0013	0.1	13.4	7.0	1	23	924	946	924	947	0.96

Sequence Information

Coding Sequence: ATGGATTCAAGTAACATATCGTGTCCAGTTTGTACTTTGTACCTTCGCCCTGGTATCACCCTGAAGACACACTTGAGTAGTCACCCCAAACAGAAAGTCATTGAAGCTTTGGTTCGCTTGTCTGAAACTGGAGAAGATGTGGAGAAAATTGCGAACTCTTCATCTGAAGCAGATGGCAGCTCTGTTAGTTCCCATGTGAATACAGCTATAGTCAACCAGACATGGAACCAAGGTAATATTATGCCTCCAAGTTTGTCGTCAATGCAAGGCAACCATGTCTTTATCTACCAACAAAGTATGACAACCACACCTCAGCAAAACATGTTGAATCCACCGTCACAGCAATACGTTATTCCGACAATTTTGAACCCGCAAATGATGCCTTACATCTACCAGCAGCAGGTGATTATGAGCAGCGGGTCGTGTCTTTCTCCAATGCGCACTCTTCCGTTTGAATTGCCTCCTGCGATCACACAAGACACTCCTCAACTTGATAGTGCCACAGAGACGTCCTCCATTGCGAGCGAACATGAAGTAAAAAAAATGGACGAATTGGATGAGTCCGAAGAATCAGAACAAATCGTCAAAAATGACGAAATGAACGACGAAATGGAGGTTTATGACATGGATGATGACCATGAAGATGACAACGTTGCGCCTCCACCAACTCCTCCCTCTTCTGATAATTTCAAAACCGACTCTAAGGCGTGTCAGACTCAAACCCAGCAGATGTCTCCAGAGGCAACTTTGCACGAGGAGGTAGTGCTTGGAAGCGAGCCTGTTAAAGAACAAGAGTCAGATTTCTATTTTATGAATGAAGGGGAGCCTAACCCGGTGTACACGTCGGAAATGGGTCAGACGTACGAGTCCGGACCCATTTACACCGCCTCGAATATTTTGCAATCTGCCGATCACTTAGATTTCGTTGATATGGACGGCATGCACGTGGTAATTAATGAAATAAATGATTTTTCCACCAATCAGATCATTTCTcaagttgaaaattttgaaggtcATGGGCCTGACCGACCCGGAGTGTTGATGACAATCGGAGGAATGATCGATAACTCGAAAGACGATTTTCTTGATCAGAGAGATGCGGAAGAGAGCATGTCGCGAGAGAGCTCTAACGTTAACATCAGAGCCGATGAAAGAATGCCCCCAAGAGGGGAACTTTCGGGACAAGAGAGCATCGGAGGCTCGAGCGATATCACGTGGAATAGAGTCCAGTATAACGAAGGTAGTTCCGGGATGTCGACTTCGTACGATTTGCTAGCGAGAGAAAATTGGGAGGCGTCGGACAGCTCGGATGTCGAAGTGCCACCTCTCCAAAGTCGGATTCCACCCCACGTCACTTATCCAGAGGACGAGAACGACACGCCCACGATCGTCGGTTTCTCAGGACCTCCTCTAAACTTCAAGTGCTCGTCGTGTGAAGAAGCCTTCAGTTGTTTGAGAGATCGCCAGGACCACGAAGCTGAGAAACATCCAGAGAAAAGAAAAATCAATCGTATCGGAGCAGAAATAGGAAAAAGCAAAGTCAAGAAGTTGGTCGTGAAAATGAAGCAAGCCAAGCCGGAacctgagaattttgataacgTTTTTACAAACAAATTGAAGATTGAAGTTCCGGTAGAGGCAGAGATTGAAGATGAACTTACACCCCCGGAAGAAGGCATGATTGCGGTTAAAAGTGATGACAACTTGGCAGTTGAGTTGAAAACAGTCTGTCCTATTTGCGATTGTGTTCTTTTAAACGCGAAAGCGTTGAAAGAACACAAGATAACAGTCCATAATGTGACCGCGCAGACTCGACATAAATGTATGACGTGTGATGAGCAATTCCCTAATGACTATAAGTTTTCCGAACATCTACGTATCCATCCTTTAGAGTGTAAGATCTGTGGAAGGCTTTTTTATAGACGCCAAAATATCCAACTCCACATGAGGAGACATTTGGGAATCAAACCTTACAAATGCGACGTCTGTGAAAAGTCGTTCCTTACTAAGCAAAAATTGGACGAACACAGGAACATCCACACCGGGGAAGCCCCAATCAAGTGTCCCCTGTGTGATGAAACGTTCCGTCGTCACTCTAATTTAGTCCAACATCGTAATCGACACCATCTCAATATTAAAAAGAAAGTAAAAGACTATATTTGTTTCTGTAAGGAAGTTTTCCACTCGAAGAAAAAGTTAGCGTGGCATAAAGAAATCCACGATTCCAAACCCAAATCGTGCGCTCATTGTAACGAAAAGTTCATCCACATGTCGAGTCTGACGCGGCATATGCGCCGTGCGCACAATGACAGATTCCTTCCCAACGGTCATAAGAACGCAGAAAACGTGGAATGCCCCATATGCAAAGGGGTGTATTTAAAGTCTTCTCTAGAGGTGCACATCCGCAACCACAGCGGACAAAGACCTTACTCCTGCTTGATCTGCAATAAGGACTTCACCACGAAATGGAACTTGAAGTTGCACAAATGGACACACGCGTCCAGAGTCTCCAAACCCTTCAAGTGCGACCAATGTAAGGGGGCTTTCATCCGGGAGTCGGATTACATCGCGCACATGAACTCCCATAAGAGTATACGTCCTTACACTTGTAACTACTGCGGAGCGCAGTTTATAAGAAAGTACAACTGTCAAAGGCACGTTAAAGAACATGAAAACGAAAAGATGTTCAGTTGTAAAGTCTGTGGAAAATCATTCCATAGGTCCTACTATCTCAAAGACCACATGCGTATTCACAGCGGACTAAGACCGTACTCGTGCCACATTTGTGGCAAGACTTCCACAACCAAGTCGAATCATAACAAACACGTGCAAATACATCATGCCAGGGAGCCAGTAAGTACTGAAAATTAA
Protein Sequence: MDSSNISCPVCTLYLRPGITLKTHLSSHPKQKVIEALVRLSETGEDVEKIANSSSEADGSSVSSHVNTAIVNQTWNQGNIMPPSLSSMQGNHVFIYQQSMTTTPQQNMLNPPSQQYVIPTILNPQMMPYIYQQQVIMSSGSCLSPMRTLPFELPPAITQDTPQLDSATETSSIASEHEVKKMDELDESEESEQIVKNDEMNDEMEVYDMDDDHEDDNVAPPPTPPSSDNFKTDSKACQTQTQQMSPEATLHEEVVLGSEPVKEQESDFYFMNEGEPNPVYTSEMGQTYESGPIYTASNILQSADHLDFVDMDGMHVVINEINDFSTNQIISQVENFEGHGPDRPGVLMTIGGMIDNSKDDFLDQRDAEESMSRESSNVNIRADERMPPRGELSGQESIGGSSDITWNRVQYNEGSSGMSTSYDLLARENWEASDSSDVEVPPLQSRIPPHVTYPEDENDTPTIVGFSGPPLNFKCSSCEEAFSCLRDRQDHEAEKHPEKRKINRIGAEIGKSKVKKLVVKMKQAKPEPENFDNVFTNKLKIEVPVEAEIEDELTPPEEGMIAVKSDDNLAVELKTVCPICDCVLLNAKALKEHKITVHNVTAQTRHKCMTCDEQFPNDYKFSEHLRIHPLECKICGRLFYRRQNIQLHMRRHLGIKPYKCDVCEKSFLTKQKLDEHRNIHTGEAPIKCPLCDETFRRHSNLVQHRNRHHLNIKKKVKDYICFCKEVFHSKKKLAWHKEIHDSKPKSCAHCNEKFIHMSSLTRHMRRAHNDRFLPNGHKNAENVECPICKGVYLKSSLEVHIRNHSGQRPYSCLICNKDFTTKWNLKLHKWTHASRVSKPFKCDQCKGAFIRESDYIAHMNSHKSIRPYTCNYCGAQFIRKYNCQRHVKEHENEKMFSCKVCGKSFHRSYYLKDHMRIHSGLRPYSCHICGKTSTTKSNHNKHVQIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00415357;
90% Identity: iTF_00415357;
80% Identity: -