Basic Information

Insect: Gnatocerus cornutus
Gene Symbol: -
Assembly: GCA_029298725.1
Location: CM055510.1:5767142-5776095[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0064 0.51 11.3 0.3 3 23 914 934 912 934 0.96

2 18 0.03 2.3 9.2 4.2 1 23 972 994 972 994 0.97

3 18 0.0002 0.016 16.0 1.5 1 23 1003 1025 1003 1025 0.98

4 18 5.9e-05 0.0046 17.7 0.5 3 23 1034 1054 1032 1054 0.97

5 18 5.1e-06 0.0004 21.0 3.0 1 23 1060 1082 1060 1082 0.98

6 18 5.9e-06 0.00047 20.8 0.3 1 23 1088 1110 1088 1110 0.97

7 18 0.32 26 5.9 0.3 2 14 1124 1136 1123 1139 0.89

8 18 0.00049 0.038 14.8 0.6 1 19 1160 1178 1160 1183 0.92

9 18 0.28 22 6.1 0.2 1 23 1189 1212 1189 1212 0.96

10 18 0.027 2.2 9.3 1.7 1 23 1224 1247 1224 1247 0.95

11 18 0.00064 0.05 14.4 4.1 2 23 1268 1289 1267 1289 0.96

12 18 2.1 1.7e+02 3.3 3.2 3 23 1298 1315 1297 1315 0.95

13 18 0.0023 0.18 12.7 1.7 1 19 1320 1338 1320 1341 0.93

14 18 0.0025 0.2 12.5 0.4 2 23 1396 1417 1395 1417 0.97

15 18 0.0069 0.55 11.1 4.0 1 23 1457 1479 1457 1479 0.97

16 18 0.00018 0.014 16.1 1.8 1 23 1488 1510 1488 1510 0.98

17 18 6.8e-05 0.0053 17.5 1.6 2 23 1547 1568 1546 1568 0.97

18 18 0.065 5.1 8.1 1.5 2 20 1611 1629 1611 1630 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0064	0.51	11.3	0.3	3	23	914	934	912	934	0.96
2	18	0.03	2.3	9.2	4.2	1	23	972	994	972	994	0.97
3	18	0.0002	0.016	16.0	1.5	1	23	1003	1025	1003	1025	0.98
4	18	5.9e-05	0.0046	17.7	0.5	3	23	1034	1054	1032	1054	0.97
5	18	5.1e-06	0.0004	21.0	3.0	1	23	1060	1082	1060	1082	0.98
6	18	5.9e-06	0.00047	20.8	0.3	1	23	1088	1110	1088	1110	0.97
7	18	0.32	26	5.9	0.3	2	14	1124	1136	1123	1139	0.89
8	18	0.00049	0.038	14.8	0.6	1	19	1160	1178	1160	1183	0.92
9	18	0.28	22	6.1	0.2	1	23	1189	1212	1189	1212	0.96
10	18	0.027	2.2	9.3	1.7	1	23	1224	1247	1224	1247	0.95
11	18	0.00064	0.05	14.4	4.1	2	23	1268	1289	1267	1289	0.96
12	18	2.1	1.7e+02	3.3	3.2	3	23	1298	1315	1297	1315	0.95
13	18	0.0023	0.18	12.7	1.7	1	19	1320	1338	1320	1341	0.93
14	18	0.0025	0.2	12.5	0.4	2	23	1396	1417	1395	1417	0.97
15	18	0.0069	0.55	11.1	4.0	1	23	1457	1479	1457	1479	0.97
16	18	0.00018	0.014	16.1	1.8	1	23	1488	1510	1488	1510	0.98
17	18	6.8e-05	0.0053	17.5	1.6	2	23	1547	1568	1546	1568	0.97
18	18	0.065	5.1	8.1	1.5	2	20	1611	1629	1611	1630	0.94

Sequence Information

Coding Sequence: ATGCTTACTTACTTTCAAGAAAGAAGCGAATCATTGAAGTCTCCTGCAAGTTTATGGACCATTTATTCCATGCTTAAAAGTACTATTGGCAGTAATAATGGTATCGATATATCCAATTTCTCCAAAGTTCACGATTttttaaagaagaaaaacgtTGGGCATAGCGTGAAGAAGTCTAAAGTTTTCACTAGAGAACAAGTCAACAAATTCCTATGCGAAGCTCCAGATAGCACTTATTTAATGATGAAAGTTGCGTTGATTTTCGGAATTTTGGGAGCTTGTCGGAGAGTTGAGCTTACAAATCTTACCATTGATAACATTGAGGATCAAGGTTCTGTTGTGATTGTTAATATTCCGGATAGAAAGACGAATGTTATGAGATCTTTTACGATAACGGAAAAAAGTAATGAAGATGTGAATttgcttaaaatttttagaaaatatttagAGATGAGGCCTACAAATTTAAATTCACGCCGATTTTTTTATGCGCTTCGGGAAAGAAAATGTATAAATCAGGTAGTTGGTATCAATACCATTGGTCGAATACCCCAAAAAATTGCAgagtttttaaatttagaagaaCCAAGTTGCTACACTGGACATGCTTTTAGAAGCACGGACTTTTCTAATGAATTTATTACAAGGACTCGTGAAGCAAACACTTTAACCAGCAGTGTTGATATAAAAATGGAAATTGATGATTCTTATCTTTCTGAAGAGGAATTAAGAAATGAAATTTCAATACCCGAAAAATCTAGGCTGCGCTATGAGAAAACATACGAAATTTTCAAAGACTGGTTACAAAAAAAAGAAGCTGTAATAAATGAAAAGATTATGCTAACTTATTTCCTAGAAAGAAGCGAAACATTGAAGTCCCCTTCAAGTTTGTGGACTCTTTATTCCATACTTAAAAGTACCATTGCAGTTAATAATGGTATCGACATATCCAACTTCTCCAAACTAgtcacttttttaaaaaagaaaaacattggACATAATGCCAAGAAGTCTAAAGTCTTCACTAAAGAACAAGTCAACAAATTTCTGTCCGAAGCTCCAGATGACATTTACCTAATGATGAAAGTTGCGCTCATTTTCGGAATTTCCGGTGCTTGTCGGAGAATAGAACTTACAAACCTTACGATGGATAATATTGAGGATGAAGGTTCTGTTATAATTGTCAACATTCCCGACGCAAAGACAAAATCGTTGAGATCTTTTACAATCACTGATAATGTGAACGAAGAgGTTTCTGAAGAGGAGTCAAAAAGGTGTGATTTAATGATACCCGCAAAATCTAAAGCACGATATGAGAAAACGTACGAAAGTTTCAGAGACTGGTTACAAGAGAAGAATGCTGTAATCAGCGAAACTTCTATGCTTGACTACTTTCTTGAAAGAAGTACCACACTAAAGTCACCTGGAAGTTTATGGGCCCAGTATTCCATGCTTAAAAGTACCGttagaataaaaaatagaatCGACATATCGAACTTCTCCAAATTACTCTCTTTTTTGAAAAAGAAGAACGTTGGACACAACACGAAGAAATCAAAAGTTTTCACCAGAGAAGaagtaaacaaatttttaggcGAAGCTCCAGACAACTCTTATTTAATGATGAAGGTTGCGTTGATTCTGGGGATTTCTGGAGCTTGTCGAAGAGTAGAACTTGCGAATCTTACGATTGACAATATTGAGGATCAAGGTTCTGTTATTATTATCAACATTCCTGACATAAAGACTTTGTGGAACAACTTTCCTATAATCACGGAGATAAATGATGAATCAGACGACAGTTTATCCATCGCCCCTGATGAAATAAAAGTCGAAATTGACGACATCGATATTTCTGTGGAAGCATGGCCAAGTGGCCCTGATTCTCTAATACCCGAAAGATCAAGAGCCCAATATAAGAAGGCTTACAACATTTTCAACGATTGGTTACAAAAAAAGAAGGTTGCAATAAACGAAAAGACTATGCTTAATTATTTTCTTGAAAGAAGCATTACGTTGAAATCTCCGGGAAGTTTGTGGGGACAGTATTCTATGCTGAAAAGTACTGTAAGAATCTATGACGGAATCGACATATCAAAATTCAACAAACTAGTCAATTATTTAAGAAAGAAAAATATTGGACACAAGAGTACGAAGAAGTGTAAATTTTTCACCAGAGACCAAGTGATAAAATTCTTGCGTGAAGCCCCAGACGAAATTTATATAATGATGAAAGTTGCGATGATACTGGGAATCGCTGGGGCGTGCCGAAGACTTGAGCTCACCAACCTTAGGGTTGATAACGTTATTGATAACGGTTCCACCATTACAGTTAATATACATGATACAAGAACAAATTCTGTGCGAACTTTTACAATTGCTGATAAACCTCACGAAGACgtcaattttttggaatttatccgaaaatatgcaaaattgcgtCCTAAAAATATGTATTCTGGAAGATTTTTCTACGCTTTTCGTGAAGGAAGCCGCAACGGTCAGATTGTTGGAATAAACACTATTGGGAGGATTCCTCAGAAAGTAGCCGAATTTTTAAAGCTCGAAGAACCAAGTTCCTACACGGGACATGCTTTTAGACGGACGTCAACGTCGTTGTTAACGATTGTTAATAGTGGAATGGATGCTTTGGCACTCAGATCTTCATTACATCCTCAAAAGCCCaatgcaaaattttcgaaaaaacgaACGAAATTCAACGAAGAAGGAACAATAATTTGTGGATTATGTCTAAAGCCTTTTAACGGAAAAGAAGAGTTAAGTCGTCACTTCAAAACTCATTCTTCCCAAAAGCAGATTTCTGTGATTTCCCAACAGATTTTGGCTAATAAGAAGATTCTGACAAAGCGTTTGAAGACGGCGGAATCGACTTCTAAACCAGAGAATGAAGAACACATCTGTGATTACTGTGATTCATCGTTTCAAGAACATGATTCTTATAGAAATCATCTGCAGACACACGAACATGATTATGTTAGACCTCTACACGTGTGTAACGTATGTTCGAAGGAGTTCAAAGACAAAGCCGTTTTTAAGGCGCATGTGAAAACTCACGAAACTAAGAAAGATATTGTCATTTGTGAAGTTTGCGGTACATCTCTTGCTGACAAGTTTTACCTAAAACATCACATGAGGGTTCATACGGGGGAAAAGCCATACATGTGTCACGTTTGTGGGAAGAGTTTTACTTTACAGAAATTTTTAACGAATCACTTGAGGGTGCATACGAAGGAAAAACCGTTTATTTGTGGGATTTGTGATCAAGGATTTACACAACGAGGGACTTTGACTATCCACATGAGATACCACACGGGCGAAAGACCGTATAACCAAAGAATTGAAACATGGAAATGTCCGCTGTGTTCTCAAACTTTTTCGACAAACACTTCAACTGAACTAAACAACCCTTTTCATTTTTGTGCAACTTGCGTCGCAAAACAGAGACCAGAACAAGATTTTCTTTGCAAAACTTGTCATAAAGTTTTTTCCACGAAAATCGCCCTAGAGAGACACGATATCATCGTCCACACCCAGAACTATCCTTTTATTTGTAAAGTGTGTGGATTAGGATGGTTTACCGAAAAAAAGCTCAATTGGCATGTTAGATCCTCACATGATGAGATCATGGTAAAGAGAGAAAAGAAGAAATTTTCATGTAATTTTTGCCAAGAAAAATTTCCTACCAGACACTCCGCTGAGTTACACCAAATGTTGGACCATCCTGATAAATTCCCGTTTGCTATTAAAAGTGCTGTTGATAACTTCGAATGTCAAAAGTCGATGTGTGATCAGTGcggtaaaatttttaaaaatcggcATTGTTTAAGAGAACATGCGAAAGTTCATGAAAATGGGGATGGCGATGGGATTTGTGACCATTGTGGATtgtatttccaaaatttgcaaaaccaCAAGAAAACACACGGACTTCAACCGCATTGTTGTACAATGTGTGGAGCGTCGTTTAAATACAAACGAAATCTGGAAATTCATGGTTTATATTGTAAGTCGATGGGAATTCGAAACGAAGACTCGACACGCTCTAAAAACAGCGAAAAAGTTTCGAAAACACTCAATAAATCTGTCGAAAAAGAGAAAAAGAAATGTTGGCccaaaactaaaatttcgaaaaaacgaAAGAAATTCAACGAAGATGGAACAATAACTTGTGGATTATGTCTAAAACCCTTTAACGGTAAAGACGAGTTAAGTCGTCACTTTAAAACACATTCTTTGGAAAACCAGATTTCTGAGATTTCTCAACATATTCTGGCTAATAAGAAGATTCTGACAAAGCATTTGAAGGGCACCACGGCGGAATCGACTTCTAAACCAGAGAACGAACAACACATCTGTGATTACTGTGACTTAACGTTTCAAGAACATGATTCTTATAGAAATCATCTGCAGACTCACGAACATGATTATGTTAGAGCTTTACACGTGTGTAACATATGTTCAAAGGAGTTTGAAGACAAAGTCGTATTTAACACGCATATGAAAACTCACGAAACTAAGAAAGATATCGTCATTTCTGAAGTTCGTGCTAAATCCGTTACTGATGAGTTTTACCTAAAAGATCCCACGACGGTTCAAACGGAAGAAAATTCATACGTGTCGTGTCACGTTTGTGGTAGGGGTTTTACTTTACAGAGATACTTAACGAATCATTTGAAGATGCATACGAAGGAAAAACCGTTTATTTATGGGATTAGTGATCAGGGATTTACACAACATGTGACTTTGACTAGCGAAAAAGTTGCCCAAACTTCCAAAACACTCGTTAATAAATCGGTCGAGAAACCCAGGAGTTGCAAAATTTGTCTTGAGACTTTTGAAGATTATCGTTTATTGACACGACATCGATGTCCGGTCTTGGCGGCGCAACTTGCGCAAAGATTGCGagaaaattaa
Protein Sequence: MLTYFQERSESLKSPASLWTIYSMLKSTIGSNNGIDISNFSKVHDFLKKKNVGHSVKKSKVFTREQVNKFLCEAPDSTYLMMKVALIFGILGACRRVELTNLTIDNIEDQGSVVIVNIPDRKTNVMRSFTITEKSNEDVNLLKIFRKYLEMRPTNLNSRRFFYALRERKCINQVVGINTIGRIPQKIAEFLNLEEPSCYTGHAFRSTDFSNEFITRTREANTLTSSVDIKMEIDDSYLSEEELRNEISIPEKSRLRYEKTYEIFKDWLQKKEAVINEKIMLTYFLERSETLKSPSSLWTLYSILKSTIAVNNGIDISNFSKLVTFLKKKNIGHNAKKSKVFTKEQVNKFLSEAPDDIYLMMKVALIFGISGACRRIELTNLTMDNIEDEGSVIIVNIPDAKTKSLRSFTITDNVNEEVSEEESKRCDLMIPAKSKARYEKTYESFRDWLQEKNAVISETSMLDYFLERSTTLKSPGSLWAQYSMLKSTVRIKNRIDISNFSKLLSFLKKKNVGHNTKKSKVFTREEVNKFLGEAPDNSYLMMKVALILGISGACRRVELANLTIDNIEDQGSVIIINIPDIKTLWNNFPIITEINDESDDSLSIAPDEIKVEIDDIDISVEAWPSGPDSLIPERSRAQYKKAYNIFNDWLQKKKVAINEKTMLNYFLERSITLKSPGSLWGQYSMLKSTVRIYDGIDISKFNKLVNYLRKKNIGHKSTKKCKFFTRDQVIKFLREAPDEIYIMMKVAMILGIAGACRRLELTNLRVDNVIDNGSTITVNIHDTRTNSVRTFTIADKPHEDVNFLEFIRKYAKLRPKNMYSGRFFYAFREGSRNGQIVGINTIGRIPQKVAEFLKLEEPSSYTGHAFRRTSTSLLTIVNSGMDALALRSSLHPQKPNAKFSKKRTKFNEEGTIICGLCLKPFNGKEELSRHFKTHSSQKQISVISQQILANKKILTKRLKTAESTSKPENEEHICDYCDSSFQEHDSYRNHLQTHEHDYVRPLHVCNVCSKEFKDKAVFKAHVKTHETKKDIVICEVCGTSLADKFYLKHHMRVHTGEKPYMCHVCGKSFTLQKFLTNHLRVHTKEKPFICGICDQGFTQRGTLTIHMRYHTGERPYNQRIETWKCPLCSQTFSTNTSTELNNPFHFCATCVAKQRPEQDFLCKTCHKVFSTKIALERHDIIVHTQNYPFICKVCGLGWFTEKKLNWHVRSSHDEIMVKREKKKFSCNFCQEKFPTRHSAELHQMLDHPDKFPFAIKSAVDNFECQKSMCDQCGKIFKNRHCLREHAKVHENGDGDGICDHCGLYFQNLQNHKKTHGLQPHCCTMCGASFKYKRNLEIHGLYCKSMGIRNEDSTRSKNSEKVSKTLNKSVEKEKKKCWPKTKISKKRKKFNEDGTITCGLCLKPFNGKDELSRHFKTHSLENQISEISQHILANKKILTKHLKGTTAESTSKPENEQHICDYCDLTFQEHDSYRNHLQTHEHDYVRALHVCNICSKEFEDKVVFNTHMKTHETKKDIVISEVRAKSVTDEFYLKDPTTVQTEENSYVSCHVCGRGFTLQRYLTNHLKMHTKEKPFIYGISDQGFTQHVTLTSEKVAQTSKTLVNKSVEKPRSCKICLETFEDYRLLTRHRCPVLAAQLAQRLREN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -