Gcor002792.1
Basic Information
- Insect
- Gnatocerus cornutus
- Gene Symbol
- ZNF711
- Assembly
- GCA_029298725.1
- Location
- CM055510.1:5835841-5839561[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.5e-05 0.0012 19.5 2.4 1 23 36 58 36 58 0.98 2 16 4.2e-05 0.0033 18.1 2.3 1 23 64 87 64 87 0.97 3 16 6.6e-05 0.0052 17.5 0.2 2 23 96 118 95 118 0.96 4 16 0.0024 0.19 12.6 1.1 1 23 124 147 124 147 0.97 5 16 0.00015 0.012 16.4 3.1 1 23 152 174 152 174 0.95 6 16 0.00014 0.011 16.5 1.5 1 23 180 202 180 202 0.97 7 16 2.3 1.8e+02 3.2 3.5 1 15 208 219 208 229 0.69 8 16 5.1e-06 0.0004 21.0 1.7 2 23 234 255 233 255 0.97 9 16 0.0074 0.58 11.1 0.8 1 23 376 399 376 399 0.95 10 16 0.43 34 5.5 0.9 3 23 407 428 406 428 0.86 11 16 4.7e-07 3.7e-05 24.3 1.4 1 23 434 456 434 456 0.99 12 16 5.9e-05 0.0047 17.7 2.0 1 23 461 483 461 483 0.97 13 16 3.3e-05 0.0026 18.5 0.4 2 23 493 514 492 514 0.96 14 16 1.4 1.1e+02 3.9 6.0 2 23 523 542 522 542 0.85 15 16 0.00017 0.013 16.2 0.3 1 23 548 570 548 570 0.98 16 16 7.7e-07 6.1e-05 23.6 0.5 1 23 576 598 576 598 0.97
Sequence Information
- Coding Sequence
- ATGGGTTTTTTTCTTTCACTAATATCCGAAGTTCCTTGTTCTGATTCTTGGCTTTCTGAGACCGATCCTTTGGCGCTCCCATCTCAAGTGGATGTTAAAGATGAATATGCGTGCAACACATGTTCAAAAACGTTTGCTGTATATTCGAAGTACCGTCGACACCTTCGGACTCACAACGCCAAAAAAAGTTACAAGTGCAGTGATTGCAATCGTACTTTTGATtcaattactacttttaaagttcACATGAGTAAAAACCATGACAAAAATTTAACGCGGAATGTTTCTTGTACTATATGTGACTATAAAGGCAGTAACAAGTATTATCTGCAAGTACATATGATCACCGTCCATACAAAAGAATATCCGCACAAGTGCGATGTTTGTAACAAAGGATTTTTGTCTAAAGGAGAGTTAGTTCTTCATAAGCAAACACTACACGAAGGAGTTCGATTTTTATGTGAAATTTGCAAGAAGTTTTTCAAAGATAAATACTACTACAACCTACATGTTAAGAAGCATTATTTGGAAAAGAAATTTTCTTGTGATTCTTGTTCTAAGAGTTTTGCTTTCGAAAGAGAGCTACGGAAACATTTGAAAGAACATAGTAGTGATATGCGTCACGTTTGCGATATTTGTGGGAAAAGTATTAGACATATGGCTATTCATAAAAGAAGACATATGAATATAAAACCAGTTGTTTGTGATCACTGTGGAAAACGATTTCCTGAAAATCACAGCCTGCAATTACACTTACGGGTACATACTGGAGAAAAACCATACAAGACTTCAAGTTTGTCGAAGCAATCCATTCTGGAGACTATTCTAAAGCAACCTAAAGACATCAGCGGATCTTCAGAATTgtTCTGTACGACATTGATTGATCTTTACGCCCCCGATTCGCCTGGATCTTCAGTTTGTTGCCTTTCTCCCCCTTTGTCTCCACTGGGAATTGAAACAATTTGTAAACCATTTAAAACATCTAAAGGCCGACCTATTATTATAACTCCTATAACGGAACAAGTCAAGACCATAGGTGAGGAGCCCGTGAAACCGCTCTCTTATATGGAAAGACTTAAGGAAGCCCGGAAAGAAGCTAAGCGAAAGTTACACCAACCCAAGAAATATCAATGTGATCGCTGTGGGAAAATTCTCGGCTCATTGTACACCTTAAAACTGCACAACAAAAATCGCCATCCGAAGGAAGCGAAGTGGCTTTGCGACTCATGTGATTATAAAGATTTCACATCTAGGGGACTCCGGAGACATATAATGAGAAACCACAAGCCAGTGACGCGCTATGAGTGTGAAACCTGCGGAAAAACGTTCGGTTTTAAGGGCAATTTAAACCAGCATAGGAAAACACATGTCGACGACCTATTTATTTGTCCTATTTGTCAGAAGAGCTTTAAGTATAAATTGGACTATACTTACCATGTTAAAAAACACTCTCCGGATTACATTAAAAATCAGTGTGTTTGTGAAGTCTGTTCTAAAGTATATGCTGATGCCAGAGACTTGAAACGGCATCTTGTGACACATTTTTCGGCTAAAAAAGAACCACAGGTTTGTGATGAATGTGGAAAGTCTTTCATGAAGTTAAGACATCATAAGAAGCGGTGTCATGAAACTGAAAAGCGATACGTTTGTGAACACTGCGGGAGGGGATTTGCGTATATCGATGATCTTAAGCCGCATGTGAGAAAACATACTGGAGAAAAACCATTTATTTGTGAAGTATGTGGGAAGAACTTTGCTCATTCTAGTGGGTTGAAGGCGCATCGAAATGTTCACATGAAGAAGCCGAAGACCGACAAGGACGAGGGTAAAAAACAGGATAAACAAACATga
- Protein Sequence
- MGFFLSLISEVPCSDSWLSETDPLALPSQVDVKDEYACNTCSKTFAVYSKYRRHLRTHNAKKSYKCSDCNRTFDSITTFKVHMSKNHDKNLTRNVSCTICDYKGSNKYYLQVHMITVHTKEYPHKCDVCNKGFLSKGELVLHKQTLHEGVRFLCEICKKFFKDKYYYNLHVKKHYLEKKFSCDSCSKSFAFERELRKHLKEHSSDMRHVCDICGKSIRHMAIHKRRHMNIKPVVCDHCGKRFPENHSLQLHLRVHTGEKPYKTSSLSKQSILETILKQPKDISGSSELFCTTLIDLYAPDSPGSSVCCLSPPLSPLGIETICKPFKTSKGRPIIITPITEQVKTIGEEPVKPLSYMERLKEARKEAKRKLHQPKKYQCDRCGKILGSLYTLKLHNKNRHPKEAKWLCDSCDYKDFTSRGLRRHIMRNHKPVTRYECETCGKTFGFKGNLNQHRKTHVDDLFICPICQKSFKYKLDYTYHVKKHSPDYIKNQCVCEVCSKVYADARDLKRHLVTHFSAKKEPQVCDECGKSFMKLRHHKKRCHETEKRYVCEHCGRGFAYIDDLKPHVRKHTGEKPFICEVCGKNFAHSSGLKAHRNVHMKKPKTDKDEGKKQDKQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -