Gcor002784.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gnatocerus cornutus
Gene Symbol
ZNF711
Assembly
GCA_029298725.1
Location
CM055510.1:5805232-5807495[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3.1e-05 0.0024 18.6 4.2 1 23 103 125 103 125 0.97
2 20 8.9e-05 0.007 17.1 0.7 1 23 131 153 131 153 0.97
3 20 3.3e-06 0.00026 21.6 6.9 1 23 158 180 158 180 0.99
4 20 0.32 25 5.9 2.6 3 23 188 209 187 209 0.95
5 20 0.001 0.082 13.7 0.2 2 23 215 236 214 236 0.96
6 20 2.9e-05 0.0023 18.7 1.0 1 23 246 268 246 268 0.97
7 20 8.5e-05 0.0068 17.2 0.8 1 23 274 296 274 296 0.97
8 20 2.6e-06 0.0002 22.0 0.3 1 23 302 324 302 324 0.98
9 20 4.9e-07 3.9e-05 24.2 4.1 1 23 330 352 330 352 0.98
10 20 0.00013 0.01 16.6 2.6 5 23 361 379 358 379 0.94
11 20 8.4e-05 0.0067 17.2 0.4 2 23 409 430 408 430 0.96
12 20 6.6e-05 0.0052 17.5 1.7 1 23 436 458 436 458 0.98
13 20 3.2e-05 0.0025 18.5 0.4 1 23 464 486 464 486 0.98
14 20 0.029 2.3 9.2 0.2 3 20 494 511 493 515 0.89
15 20 0.00037 0.029 15.2 4.6 1 23 520 542 520 542 0.96
16 20 0.029 2.3 9.2 1.8 2 23 552 574 551 574 0.93
17 20 0.0003 0.023 15.5 0.1 1 23 581 603 581 603 0.97
18 20 1.9e-06 0.00015 22.4 1.4 2 23 610 631 609 631 0.97
19 20 1.3e-07 1.1e-05 26.0 0.8 1 23 637 659 637 659 0.98
20 20 0.005 0.39 11.6 0.8 1 23 665 688 665 689 0.96

Sequence Information

Coding Sequence
ATGTCAATTTCGCTGTATCAAGACCACCTTTACGCGGAAATGTCCACTCTCCAATGTAAATACTTAATGTCAATAGTTGACTCTAAACAAATGTCCGAAGACAACATTCTGGAGAGTTCTGTGGTGGACCAGTTGAACGAATCAGATGCTGACCTCTTGAATCTTTTAAGCACGGAAGATGATTGTAGCGATATTCTTAATAACATAGCAAGCAACGAACAATTTGAACGACTTATGAACAGTGACTCCAACTTTGTCGACGAAATTATAGACAAAATGAAGGAACAGACTCCAATCGAAAACGCTTTTAAATGCTATCAATGTAGTAAAGTATTCAAATCGAAAAAACTTTTAAAGAAGCATCTATTTATTCACACAGGAATTCGAAAGTTTGCCTGCGACGTTTGTGGGAAGAGTTTTAAGTATCGCTATGAAGTTGACGTTCACAAAAAGAGTCACAACAATCCTACGTTTCAATGTGACATTTGCTCCAAGATGTTTATACATAAATCGCATCTGACGACACATAGAAGAAAGCATTTGAATGAATTTGTGGCTTTTTGTAAAGAGTGTAACATGGGATTTGTCACGAGGTTTATGCATAAGACTCACATGAATCTGGTGCATAAGAACTTACAGTTGGTGTGTGACACATGCGGCGCAAGATTGAGTTCTTTGTCTTCTTTGAAAGAACATAAGTTGACTCATGATCCCAACTACGGTAGTGAGAGGACACACGTGTGCGAAATATGTGGGAAATCGTATTTAAATTCGCGCAATCTTAAAGGACACATGAAAATACACAAACAAATTCGAAGTCATGTGTGCAACATTTGCGGGAAGTCAGTTAGCAGTAAGAAGATTTTGGAAACACATATCAAGATGCATACAGGACTCAAAGACTTTATCTGTAAAGTGTGCAATAAAGGGTTCGCTTCCAAGGAGTACTTAGATGTGCATATGAGGATTCACACTGGTAACAAACCGTTTAGTTGCGAGACTTGTGGTAAAAGATTCACTCAGAAGACGTCTTTGACGGTGCACATGAGACACCACACAGGCCACAGACCCTATAAGTGTGAGTGTGGAAAAGAGTTTACCACTAAAAGTCACCTCATGACCCACTACAAAGCTCATGATGTCGGGGGAGTCGATATTGATCTCATCTCAAAACCCGTgaacaagaagaacaagaagactCTTCAACCTACAGCAAGACCAAAAGTGTGCTCTTTGTGTTCTAAATCATTCCCAAGTAATGCGAAGTTGTTACGCCACCTAGCCTCTCATAGTGATGCTCGACCTTATTCCTGTGATCTTTGCTCGAAAACCTTTAAGCAAAAGTACGATATAGTCATCCATAAACGGTCCCACGATCCTGTTTCTTCTTACCCATGCGACCTCTGCGAGAAAGTCTTGAAAACCAAAGGATCTTTGGTAACTCACCGTCGACGCCATTTGAAGCagtacatcaaaatatgcaaaGTTTGTGGTGCTGGCTTTGTTACCCATCAAGAATATAACAACCATGTGGGGGCGAAACACGAAGGCGGCGCTCACATATGTCACGTTTGTGGGAGATCCTGCTATGATAAAGCTTCGTTACAAAGTCACTTGCTGCAACATGATGAGGGGTACCaagaaactaaattaaaatgcGAGTTTTGCAACAAAACGTTTTTACAAGACAGATACTTAAAACAACACATCGGGCGCAAGCATAGAAATGGAGGACAGAAGTTCATATGTGACTTGTGTGGCAAGAATGTCAATTCGAAAATTAGTTTGAGGGATCATTTGATTATGCACTCAGGTTCTAAACCTGTGGAGTGTAAACGATGTGGGAAGAGGTTTACATTGAGAAGTAGCTTGAGTACGCACATGAGGATCCATACTGGAGTTCGACCATATGAATGTGACCAATGTGGAAAAGCGTTTACACAAAAGACGGCTTTGACGACGCATTTGAGATATCATAGTGGAGAAAGACCCTTTGTTTGTGATGTTTGCAGTTCAGGGTTTGTGAGTCGAGGACTTTTAAACTTGCATCTGAAAAATAAACATCATAGGGTTGCAAACGAGGGCAAAAGCGATGTACTCCACTAG
Protein Sequence
MSISLYQDHLYAEMSTLQCKYLMSIVDSKQMSEDNILESSVVDQLNESDADLLNLLSTEDDCSDILNNIASNEQFERLMNSDSNFVDEIIDKMKEQTPIENAFKCYQCSKVFKSKKLLKKHLFIHTGIRKFACDVCGKSFKYRYEVDVHKKSHNNPTFQCDICSKMFIHKSHLTTHRRKHLNEFVAFCKECNMGFVTRFMHKTHMNLVHKNLQLVCDTCGARLSSLSSLKEHKLTHDPNYGSERTHVCEICGKSYLNSRNLKGHMKIHKQIRSHVCNICGKSVSSKKILETHIKMHTGLKDFICKVCNKGFASKEYLDVHMRIHTGNKPFSCETCGKRFTQKTSLTVHMRHHTGHRPYKCECGKEFTTKSHLMTHYKAHDVGGVDIDLISKPVNKKNKKTLQPTARPKVCSLCSKSFPSNAKLLRHLASHSDARPYSCDLCSKTFKQKYDIVIHKRSHDPVSSYPCDLCEKVLKTKGSLVTHRRRHLKQYIKICKVCGAGFVTHQEYNNHVGAKHEGGAHICHVCGRSCYDKASLQSHLLQHDEGYQETKLKCEFCNKTFLQDRYLKQHIGRKHRNGGQKFICDLCGKNVNSKISLRDHLIMHSGSKPVECKRCGKRFTLRSSLSTHMRIHTGVRPYECDQCGKAFTQKTALTTHLRYHSGERPFVCDVCSSGFVSRGLLNLHLKNKHHRVANEGKSDVLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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