Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: -
Assembly: GCA_037074685.1
Location: JAYKKO010000034.1:35071-53768[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 3.8 3.7e+02 2.8 1.2 1 23 327 349 327 349 0.95

2 23 6 5.8e+02 2.2 1.0 1 20 387 406 387 408 0.90

3 23 0.25 24 6.6 0.5 2 20 421 439 420 441 0.94

4 23 0.25 24 6.6 0.5 2 20 473 491 472 493 0.94

5 23 0.25 24 6.6 0.5 2 20 525 543 524 545 0.94

6 23 0.25 24 6.6 0.5 2 20 577 595 576 597 0.94

7 23 0.25 24 6.6 0.5 2 20 629 647 628 649 0.94

8 23 0.25 24 6.6 0.5 2 20 681 699 680 701 0.94

9 23 0.25 24 6.6 0.5 2 20 733 751 732 753 0.94

10 23 0.25 24 6.6 0.5 2 20 785 803 784 805 0.94

11 23 0.25 24 6.6 0.5 2 20 837 855 836 857 0.94

12 23 0.25 24 6.6 0.5 2 20 889 907 888 909 0.94

13 23 0.25 24 6.6 0.5 2 20 941 959 940 961 0.94

14 23 0.25 24 6.6 0.5 2 20 993 1011 992 1013 0.94

15 23 0.25 24 6.6 0.5 2 20 1045 1063 1044 1065 0.94

16 23 0.25 24 6.6 0.5 2 20 1097 1115 1096 1117 0.94

17 23 0.25 24 6.6 0.5 2 20 1149 1167 1148 1169 0.94

18 23 0.25 24 6.6 0.5 2 20 1201 1219 1200 1221 0.94

19 23 0.25 24 6.6 0.5 2 20 1253 1271 1252 1273 0.94

20 23 0.25 24 6.6 0.5 2 20 1305 1323 1304 1325 0.94

21 23 0.25 24 6.6 0.5 2 20 1357 1375 1356 1377 0.94

22 23 0.25 24 6.6 0.5 2 20 1409 1427 1408 1429 0.94

23 23 0.065 6.2 8.4 0.6 2 20 1438 1456 1437 1458 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	3.8	3.7e+02	2.8	1.2	1	23	327	349	327	349	0.95
2	23	6	5.8e+02	2.2	1.0	1	20	387	406	387	408	0.90
3	23	0.25	24	6.6	0.5	2	20	421	439	420	441	0.94
4	23	0.25	24	6.6	0.5	2	20	473	491	472	493	0.94
5	23	0.25	24	6.6	0.5	2	20	525	543	524	545	0.94
6	23	0.25	24	6.6	0.5	2	20	577	595	576	597	0.94
7	23	0.25	24	6.6	0.5	2	20	629	647	628	649	0.94
8	23	0.25	24	6.6	0.5	2	20	681	699	680	701	0.94
9	23	0.25	24	6.6	0.5	2	20	733	751	732	753	0.94
10	23	0.25	24	6.6	0.5	2	20	785	803	784	805	0.94
11	23	0.25	24	6.6	0.5	2	20	837	855	836	857	0.94
12	23	0.25	24	6.6	0.5	2	20	889	907	888	909	0.94
13	23	0.25	24	6.6	0.5	2	20	941	959	940	961	0.94
14	23	0.25	24	6.6	0.5	2	20	993	1011	992	1013	0.94
15	23	0.25	24	6.6	0.5	2	20	1045	1063	1044	1065	0.94
16	23	0.25	24	6.6	0.5	2	20	1097	1115	1096	1117	0.94
17	23	0.25	24	6.6	0.5	2	20	1149	1167	1148	1169	0.94
18	23	0.25	24	6.6	0.5	2	20	1201	1219	1200	1221	0.94
19	23	0.25	24	6.6	0.5	2	20	1253	1271	1252	1273	0.94
20	23	0.25	24	6.6	0.5	2	20	1305	1323	1304	1325	0.94
21	23	0.25	24	6.6	0.5	2	20	1357	1375	1356	1377	0.94
22	23	0.25	24	6.6	0.5	2	20	1409	1427	1408	1429	0.94
23	23	0.065	6.2	8.4	0.6	2	20	1438	1456	1437	1458	0.92

Sequence Information

Coding Sequence: ATGGAAAATCTCATTAACTCTAAAATAGATAAACAGACAATCTATGATATCTATCGAGCATGTCGCCTGTGCGGCGCCGGAGCTGGCTACAAAATGCCTATTATACAAACCGTTGTTGATCTCGATGCCAATGGGGTTGAATTGAAGCAGAAAATACGGGATTGTGTACAAATTGAGgtgaACTCTGATGACAAGATGCCACCGCTAATTTGCGAGCTATGCGTGGACAAAGTGAACGACTTCTACGAGTTTATGGACATGTGCCAGCAGACAAACAAGAGAACACGCTTGCGCCTCGGTCTGCCACCGCAGTCCACAGGCAAAGACTCGGGCGACTGCATACTCGGGGTGACGGAGCAGGTGTTTGGTAACGAGGACTCGGACGAGCCGCTCTCGGCCTCGTCCTCGCGGAGGCCGAAAGCCGAGCACAAAGTTAAGATAAAGGTGGAGAAGTTAGAAAACACTCGGGATAACCGCTCGCGCCCGGAAAGTGGTAAAGAGACGAAATCCCGCCAAGAAAATAGTCGAGAAACTCGATCCCGCCCTGATAATAGCAGGAACTTTCGGCACCGCCTGGAGAGCAAAGAGTCTCGTTCGGAATGTAGCAGGGAGTCTCGCTCCCGCCCGAGGAATAGAGAGTGTAGCGGGTCCCGGTCGCCGAGTTTGTCGCCGCGGCAGACGCGGCAGAAGAGGCCGCCGACGCCGCCGCGACGGACGCGCCACGGTGGCTCTACTAATGCGGACATTGAGGAATATACGACATTAAATAACCTGAAGCATCAAGTAAAGAATCTATCAAGCAAGAGTTTACCGCAACCTCCCAAATCAATATTGAAGATGGATATTAAGAGTGAAGACGCTGGCAAATCGAAGCGATGTCGAGAGCCAAGCAAGCCGGACGTGCCACAGAAGAAAGTCAAGTTATCAGTCCCCCCTCCGAGGGCCCGGCCCTCTCGTAAGCCGTCCCCGCCCCCTCCGCACGCGTGCATGGTGTGCCGCAAGGGTCACGCGACGTCGCAGGCGCTCTCCAGCCACGTGCGCGTGCACACGGTCACGTACACGCCCGTCAAGCTGTCATGCAACGCGTGCGAGGAGTGGTTCCCGACAGTGGACGAGGCGGTCACCCATCACCGCGTGCACAAATTGAAGAACAGGCCGTACCGCTGCCGACGGTGTAGGACAAAGTTCAAGCTGCAGCAGGGGTACGACGACCACATCACGAATTCCGAGTGCGTCCCGTGGACCGAGGCGCCTTTGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGGTCGGTGCGCTCTCATGTGTGAACATGTCGTCTACCAGAGTCAGAGGCAGGGTCGACAGGCGCCCTCGGTGAAGTGTCCCTCGTGCTGGAGGCTGTTCCCCACGCGCACGCTGCTGGAGCAGCACAAGTGCGGGGGCGCGGACTGCCGCCCCGGAGgtAAATGTATGAAATGCAAACGGACGTACGCGCTTCTAAAGAATTTGAAGAAACACGAGGAGACATGTTCGGCGAAGAGGAAGAGCGAGCCGATAATAGACCCGGCAGTGAGGGCGCGGCTGCTGCCCGCTGCGGTGCGACTGTGGCGCTGCGACCCGCTGCTGCGCGGCGGCCGCTGCCACGCGTCGCGCGTCACACAGgAATACGGTTTCGACCCCCTCTGTGTGTACCCGTACCGTCGTCGGCGAGAGCTCGCCGCGAACCTGATGGTGAATATAAAGGCTGAACTGGACGAGTTTTATGACGAAGAGGATTATGTGCACTGGGACAGCGAGTGTAGCGAGGAAGAGGAGTCTGCTAAGTCAGTCTGTTCCCTGACAACATTGGCACTGAAGACTATATTCTCCAGGAGGTGCCTCGGCAGGGTTCCAAGGAAGCGAAGAAAGGTGAAAACGGAGTCGAACGCATTCGATTCAGTGTTGAACGCGAGCGGATTCGATGATATCAGGTCGGACATCGATAATATAATCGATAACCTCGGTAAAGACGACGACGATTATACGGACATTAACAAATCGATTAATGAAAGAAAAGATAATGATTCGATCAACAGTGAATCGTTACTTTGTGATGCGGTTGGTGATAAAAGTGAAGATTTTACCGCGATTAACGATACGGATAGCCAGTCGTTGTTTTCTGACGGGCGTAACGATGAGAAACATGAACATACGGGAGTTAGGGAGTTTAGTGTTGATAATGATAGAACAGATGACGACAAAACGAAAGAGTCTAGATTAAGTGGCGAATTTAATGATGTTAATGACAAAACAGATTTAATTAGCACTAATGATAAGGTCAATCatcattattttgataacgcCAGTACGAATAGTGATTTAGATAATGACGATGAAGCTACACAAACAAATGATGATTGTAGTGGTCATCACACaaggacagacggacagacaaatgGTGACGTTGATGGTAAGGATAATGTTACAATCGGTGACGATTTGGTGAATCATGAAAATACTCAAAGTCGATTAGATACTACGAATTCAAATGAAAATCATAATGAGACGACGGTAAgcgaaaaaaatgaaattacgaATGAACAGGTTAACGCAAAAACTGTGAATAGTACGAGGCATAATACCTTTACAGATTCAGTTTCTGAAGTCGACCAAATTGAAAGAAATCACCGAGACGAGAACGCAGCTATATGCAAcgatattgaaaacaaaattaacgatttggtTTCTTTCAATAATAGCGGTGAGAACGATAATAACGGTGAAATTATAAACAACGATAGGTTTAGTGTAAACGAAACGGACGCATCCGATGAATTGACGCCAcattgtaatgtaaatactgaCGAAGAGAAAGAGGAATTAAGTTTAAACACTAATATTATTGATAAAGATAAGATTACTCTAGACGATTTGATACCAGCTAATGATCGAGAAACTAAATCGATGGATTTGGATAGCATTTCGGATGGGGAATTCGATTTTGATGCATAG
Protein Sequence: MENLINSKIDKQTIYDIYRACRLCGAGAGYKMPIIQTVVDLDANGVELKQKIRDCVQIEVNSDDKMPPLICELCVDKVNDFYEFMDMCQQTNKRTRLRLGLPPQSTGKDSGDCILGVTEQVFGNEDSDEPLSASSSRRPKAEHKVKIKVEKLENTRDNRSRPESGKETKSRQENSRETRSRPDNSRNFRHRLESKESRSECSRESRSRPRNRECSGSRSPSLSPRQTRQKRPPTPPRRTRHGGSTNADIEEYTTLNNLKHQVKNLSSKSLPQPPKSILKMDIKSEDAGKSKRCREPSKPDVPQKKVKLSVPPPRARPSRKPSPPPPHACMVCRKGHATSQALSSHVRVHTVTYTPVKLSCNACEEWFPTVDEAVTHHRVHKLKNRPYRCRRCRTKFKLQQGYDDHITNSECVPWTEAPLVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGRCALMCEHVVYQSQRQGRQAPSVKCPSCWRLFPTRTLLEQHKCGGADCRPGGKCMKCKRTYALLKNLKKHEETCSAKRKSEPIIDPAVRARLLPAAVRLWRCDPLLRGGRCHASRVTQEYGFDPLCVYPYRRRRELAANLMVNIKAELDEFYDEEDYVHWDSECSEEEESAKSVCSLTTLALKTIFSRRCLGRVPRKRRKVKTESNAFDSVLNASGFDDIRSDIDNIIDNLGKDDDDYTDINKSINERKDNDSINSESLLCDAVGDKSEDFTAINDTDSQSLFSDGRNDEKHEHTGVREFSVDNDRTDDDKTKESRLSGEFNDVNDKTDLISTNDKVNHHYFDNASTNSDLDNDDEATQTNDDCSGHHTRTDGQTNGDVDGKDNVTIGDDLVNHENTQSRLDTTNSNENHNETTVSEKNEITNEQVNAKTVNSTRHNTFTDSVSEVDQIERNHRDENAAICNDIENKINDLVSFNNSGENDNNGEIINNDRFSVNETDASDELTPHCNVNTDEEKEELSLNTNIIDKDKITLDDLIPANDRETKSMDLDSISDGEFDFDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -