Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: RREB1
Assembly: GCA_037074685.1
Location: JAYKKO010000014.1:7844308-7857577[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0029 0.28 12.7 0.1 1 23 101 124 101 124 0.97

2 12 7.7 7.4e+02 1.9 0.6 1 11 166 176 166 187 0.82

3 12 0.023 2.2 9.8 0.1 1 23 315 337 315 337 0.97

4 12 0.0012 0.12 13.8 0.4 1 23 346 368 346 368 0.99

5 12 0.00077 0.074 14.5 2.0 1 23 374 397 374 397 0.97

6 12 0.0031 0.3 12.6 1.6 1 23 756 779 756 779 0.96

7 12 0.00026 0.025 16.0 1.3 2 23 973 994 972 994 0.97

8 12 0.026 2.5 9.6 5.3 1 23 1000 1023 1000 1023 0.97

9 12 0.17 16 7.1 1.3 1 23 1056 1080 1056 1080 0.91

10 12 3.3 3.1e+02 3.1 0.1 1 19 1105 1123 1105 1128 0.77

11 12 0.0019 0.18 13.2 0.2 2 23 1168 1189 1167 1189 0.96

12 12 0.029 2.8 9.5 5.3 1 23 1195 1217 1195 1217 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0029	0.28	12.7	0.1	1	23	101	124	101	124	0.97
2	12	7.7	7.4e+02	1.9	0.6	1	11	166	176	166	187	0.82
3	12	0.023	2.2	9.8	0.1	1	23	315	337	315	337	0.97
4	12	0.0012	0.12	13.8	0.4	1	23	346	368	346	368	0.99
5	12	0.00077	0.074	14.5	2.0	1	23	374	397	374	397	0.97
6	12	0.0031	0.3	12.6	1.6	1	23	756	779	756	779	0.96
7	12	0.00026	0.025	16.0	1.3	2	23	973	994	972	994	0.97
8	12	0.026	2.5	9.6	5.3	1	23	1000	1023	1000	1023	0.97
9	12	0.17	16	7.1	1.3	1	23	1056	1080	1056	1080	0.91
10	12	3.3	3.1e+02	3.1	0.1	1	19	1105	1123	1105	1128	0.77
11	12	0.0019	0.18	13.2	0.2	2	23	1168	1189	1167	1189	0.96
12	12	0.029	2.8	9.5	5.3	1	23	1195	1217	1195	1217	0.97

Sequence Information

Coding Sequence: ATGACCATGTTGAGAACACGAATTATCAATTTCTCGACCACCAACCGCATTCGCACTGGAATTTTACCTGAAACTCTCGCCGATATCAAAACAGAGGAGGTTATTACGGAAGCCAAAGTCGAAGCTGACGAAGAAATGGATAAAATGATTGAGAAACAAGAATTAAGGGCGACGAGGACCACCAGTATTGACAGCGACAACCGCTCAGATAGGAGCGAGGAGGAAGATTCTAGAAGATCCCGCAAGAGAGCAGCGTCCACGTCTCCATCGCCAATACCAGTGGACAAGAGGATCGCCAGATTCGAATGCCCCAAATGTCGCCTCAGATTCGACTCCCCTAACGCTTTCGATATCCACATCCTCACAGTGCACGGCGACGCCTCCAGAACAGGCTTCGATGATCTCACCTTCGTCGACTTCTCAAGCAAAAAGTTTCCTGAAATAGCAAGAGGCATCTGCGAACGCAGTCCACATATTTCGATCACCGAACAACGCTACAGGTGCGACATGTGTTCCCGAGATTTTCCGTGCGGACAAGCTTTAGATATCCATAGAAAAACCTGTACTAGCACTACAAGGATCCCTACTCCAGAGCGCGATAGAAGGGAAGACTTTTTCGCCAAGCTTGACCTCAGAAATAGATCGTTTGGTATTCCTGGAACTTTAACACCGCCCATGGATAGATTTACTCCTAAATTTGAGGACGGGCATATCACTACAAATGGCATAAGACACATCGATGCTGCTAGAGACCTAGCAGACATTCAATCAATTCTGAACGTGACATCTGCTGGGAGCCTGTTGGAAAGGTTAACTGGTACAAGAGTCGCGCTTGAGAATACTGTGCTTACCCCTCCTGATACTGGTAGTAAGGAAAGGGATCATGAAGAGACACAGGATAACTTTGCTGCAGAATTCAGGCGAATGAAACTGCGAGGTGAATTCCCCTGCCGCCTGTGTCCTGCCAAGTTCCCAAATCTGCGTGCGTTAAAGGGACATAACAGAGTTCATCTAAGTGGGACAGGCCCTGGGCCATATCAATGTAACATGTGCCCTCATGCTTCTTTAGATAAAGCAGCTTTAGTCAGACATATGCGCACGCACAATGGGGACCGGCCTTATGAATGCGCAGTCTGCAACTACGCCTTCACTACAAAAGCTAACTGTGAACGACACTTAAGAAACCGGCATGCGAAAGTCACCAGGGAGGATGTGAAACGTTCAATAATTTACCACCCATCTGAAGATCCTAACAACGACGAAGTGAACTCCAAACTGGCCCGAGATGATGTGAAACGGTCTCTGGCGTTCCATACTCCGGAAATCGAAAGACGCAGTGAAAGCACTGGTCGAGACACTCCTCTTACACACTTTACTCCCAGTTTCATAACTGAAAGACATCCAGTTGCTTCGCTGAATACTAAAACAATCCCACCCATTCCACCAATTTCAGCAATACCCGACACACCAACTTTAACCACTAGAGAATCTGAACAACAGATGCCCAGAATCAAAGTGAAAGGTATTGGTCAACTCACTCAAATACCAGAGTACAGGCCCCCCGAAGTGTCTTACAAAACTAACGATGTCCAATCTGATAATTATGATGAAGAAGCTCCCGTTGATCTCAGTACAAGCGACAACAACAGCTGTGACGTGCTAGATCTTAGTAACAAAAAGAAACGTGACGTCGAAAATGATGAACCTAAAGCCCCACCGAGACCATCATTTGAACCAAACCCGGCGGCAGTTACAGCTGAAACCATTCAAAAGGCGAGTTTGTTATTAGCTCACCAAAGACTTTTTGAGAATTCACTTCCCAAAATTGATCCAGCAAATTATTATGCAACACAGCTATCTCAACTTTACACCGGCACCGTACCGGGAATACCTGGTCTGCCTCTACCACCTTCCTTTCCTATCAGCCCTTATTTTCTCCAACCCTCTTTTTTTCCTCACCCAACTGACTCCCAAGAACTTGCCGAAATAAAGCAGCGTATCCAAAAAGAGATCATTCGCAATCTTAGCATGTCTGGTGGAAGACTGGTACCTAACGAGCAAGACGCTCCAACAAAGCAAGAGCCTGAAGAAGAAGATCAGAAACCTCTCCCACCAATAGTATCTCCTTCACCGTCTCCTCAACCTGAATCTCCAAGGCCTATGAATAACAGCCTCGTGTCACCAAATGACTCCGTGAAAATGGTCATCAAAAATGGCGTTTTAATGCCAAAGCAGAAACAGCGGCGCTACAGAACTGAAAGACCATTTTCCTGCTCTCAATGCTCTGCTCGTTTCACTCTCCGCTCTAACATGGAAAGACATGTCAAACAACAGCATCCACAACACTGGAGCGTCAGGAGACCAGCGCCAAGAGCTCCCCCTCCATACCCAACTACAGACGCTTTGGCTGACAGAGTTAAATACGCTCTTTTAGCTAGACACCTAGAAAGGCCGTTGCAACAACCAGAACGATCACCAATCCGGAGAGACTCAGATGAAGTTGCTGACAACGAAGAGGATGAAGACGACACTTTAGTTATAGATGAGGAACCTGAAGATCTTAAATCCGATGAGCATACTGCCGCACACCGAGCTGCCGCTGAAATCTTAATGGCGACTCGACAGCAAGAACTCAACAAAGATTTCGACCTCAAAATCGCGGGAAATCTGATCAACAAGCCCATTCCTATTACAACTGAGAAGACTGAAACTGGTACTGACCCGATTCCATTGACTGGCCAGGACGCTGTTCCTGTGGTACCGACGCGTAGTGACGAGGAAGAGGATGAAGAAGGTCTAGTCGCGTCAACTAGTGAAGGCAACAACTCTGGAAGTGATGAAAACAAATCCGAATCAGACACAGGAACTCAACCACCGAAGAAAAAGTCCGCCTACAGCCTAGCTCCTAACAGAGTATCGTGTCCATATTGCCATAGAAAATTCCCGTGGTCTTCGTCGCTCCGCCGCCATGTCCTCACACACACAGGCCAGAAGCCCTTCAAGTGTCCACACTGTCCGCTTCTCTTCACCACCAAGTCGAACTGTGACCGCCATTTACTGAGGAAGCATGGAGGCTCAGCGAGAGCTATTCTGGCAGAGCCGATCAACGACACAGTGCCTCCGCCCCAGCCAGCCAATGACACCAGAACAGTCCCAGAAAGGCCGTTCAAATGTGCATCCTGTCCGAGTAGTACCTTCTCTTCAATGGATACGCTGAAAAAGCACATGTCCTCACGGCATGGCACTGGTGATTCTGAGCCCGGTTCCCCCAATCCCGAAGTGAACGATGATGTACCGGATGGCGGATTAGTTTTCAAGTGCCATCTTTGTGAAGCCTCATATGGAGACAGGGGTGGAGCGTTAGGCCACTTGGCTGCTACACATGCCGCTGAGTATGAACAGCTTGTCAGCAAGGGAGCTTTGGATGCAGCCAGTGACAGAAGCGAGAGTGCTGACGATGATGAGAGGGGGAAATTCCCTGATCACGCCAATAGAAAGGTCGTCTGCGCATTCTGCGTCCGTCGCTTCTGGTCGGCGGAAGACCTGCGTCGTCACATGAGGACACACTCCGGAGAACGGCCCTTCGCCTGCGACCTCTGCCGGCGGCGGTTCACGCTTAAGCATAGCATGCTCCGGCACCGCAAGAAGCACAGGGAGGAGGTCACCGATGACGAGGAGGCTTCGCCGCCCCACACCCCTGCGGAAGCTGATAACGTCGCTAATGGATATCGTTACCAAGACGATGATGGCTCCGGGAACGAGATCCCGAGTAATGTGAACAACAACAACTCCCCTCCAGCGGCGCCTTACGAGAAGAAACTCAAACTAGACATGACATCTCGCAAGTACTCGTCCGAAAACGAGAACGACACCGAAAATGGAGGAGACCTCATCGGGAAACTCCTAGGTATCCCCGACAAGACCATCATAAATAAACTCTTATCTTCAGCGGATGAAGCAGCAAAGTTCCTTGGAGTAAATAAATGA
Protein Sequence: MTMLRTRIINFSTTNRIRTGILPETLADIKTEEVITEAKVEADEEMDKMIEKQELRATRTTSIDSDNRSDRSEEEDSRRSRKRAASTSPSPIPVDKRIARFECPKCRLRFDSPNAFDIHILTVHGDASRTGFDDLTFVDFSSKKFPEIARGICERSPHISITEQRYRCDMCSRDFPCGQALDIHRKTCTSTTRIPTPERDRREDFFAKLDLRNRSFGIPGTLTPPMDRFTPKFEDGHITTNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVALENTVLTPPDTGSKERDHEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDDVKRSLAFHTPEIERRSESTGRDTPLTHFTPSFITERHPVASLNTKTIPPIPPISAIPDTPTLTTRESEQQMPRIKVKGIGQLTQIPEYRPPEVSYKTNDVQSDNYDEEAPVDLSTSDNNSCDVLDLSNKKKRDVENDEPKAPPRPSFEPNPAAVTAETIQKASLLLAHQRLFENSLPKIDPANYYATQLSQLYTGTVPGIPGLPLPPSFPISPYFLQPSFFPHPTDSQELAEIKQRIQKEIIRNLSMSGGRLVPNEQDAPTKQEPEEEDQKPLPPIVSPSPSPQPESPRPMNNSLVSPNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTTDALADRVKYALLARHLERPLQQPERSPIRRDSDEVADNEEDEDDTLVIDEEPEDLKSDEHTAAHRAAAEILMATRQQELNKDFDLKIAGNLINKPIPITTEKTETGTDPIPLTGQDAVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPINDTVPPPQPANDTRTVPERPFKCASCPSSTFSSMDTLKKHMSSRHGTGDSEPGSPNPEVNDDVPDGGLVFKCHLCEASYGDRGGALGHLAATHAAEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEVTDDEEASPPHTPAEADNVANGYRYQDDDGSGNEIPSNVNNNNSPPAAPYEKKLKLDMTSRKYSSENENDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01503325;
80% Identity: -