Basic Information

Insect: Glyphodes pyloalis
Gene Symbol: -
Assembly: GCA_037074685.1
Location: JAYKKO010000014.1:2838328-2854258[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.18 18 7.0 1.6 1 23 282 305 282 305 0.93

2 9 0.00074 0.071 14.5 3.6 2 23 312 333 311 333 0.96

3 9 6.6 6.3e+02 2.1 0.6 1 19 337 355 337 359 0.79

4 9 0.00038 0.037 15.4 6.5 2 23 365 386 365 386 0.98

5 9 0.00069 0.066 14.6 0.4 1 23 390 413 390 413 0.98

6 9 0.013 1.3 10.6 0.2 2 20 432 450 431 452 0.93

7 9 0.0026 0.25 12.8 4.5 2 23 511 533 510 533 0.94

8 9 1.4e-06 0.00014 23.1 0.8 1 23 572 594 572 594 0.97

9 9 5.7e-06 0.00055 21.2 1.0 1 23 600 623 600 623 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.18	18	7.0	1.6	1	23	282	305	282	305	0.93
2	9	0.00074	0.071	14.5	3.6	2	23	312	333	311	333	0.96
3	9	6.6	6.3e+02	2.1	0.6	1	19	337	355	337	359	0.79
4	9	0.00038	0.037	15.4	6.5	2	23	365	386	365	386	0.98
5	9	0.00069	0.066	14.6	0.4	1	23	390	413	390	413	0.98
6	9	0.013	1.3	10.6	0.2	2	20	432	450	431	452	0.93
7	9	0.0026	0.25	12.8	4.5	2	23	511	533	510	533	0.94
8	9	1.4e-06	0.00014	23.1	0.8	1	23	572	594	572	594	0.97
9	9	5.7e-06	0.00055	21.2	1.0	1	23	600	623	600	623	0.98

Sequence Information

Coding Sequence: ATGACTGACCTCAAAATTTGTAGAATTTGCGTCGGAACCAAAGCAAAGATGTACAAGTTCGACCAATTCCAATTGACGTATTATTACGAAGAAATCATGGATGCAGAGttcaACAAAAGAGATGGGCTACCACAGTACTGCTGTTACGAGTGTGCAACTATGCTGCATAAATTCTACAAGTTCAAGAATAAATGCACACAGGCTCACAAGCTGTTCAAAGAGCTCCTGCGGAAAGGTTCGCTCACCCGCGATCGCATATACAGCGTAAAGAATAAGATAACAAACCTGTCATCACCACTAGACATCCTCAGAGTGACGAAGAGAGTCAAAACCGTAACCATTAGATGCCACCGTCAAACAGTAGACTCTGACTTTGACGAGGAGGATAACGAGGAtcttaagaaaataaaagagaAAGAAGAAGAGAAGTTACTAAAAGAATCCAAGCTTAACGAAACGTTTATAAAGGTAGACGAGCCTGAAGTGTATGGTGAAGTGTTTGATGACTACAAACCGTTGCTAAGCGGCGATGAAATGGATATGTCGTGCGATGACAACGATAATGACGCTACATATGTACCCGAAGAACCTGTCATCATTGCACCGAGCAGTTCCAAGTCCAAATCAGATAAGAAGAAGTCTCACGGTGACTCTAAGCCTGTTAAAGAAAAGGCAGTGGCCATAGCTAAGCCTAAAAAGACTTATAGGTTTAATAAGCCTAAAAAGAAGCCGACAGAGAGTTTCTTGGATCCCAATCATTGGAGGAAGTCGTTGCTTAGCGAAGAGGAAGCGTTGAAGCAGTTTAAGGCGAGGGCTGATGATCCGAAGTATCCGTTGTGGGCGTACAAATGTAACGATTGCATCAAAGGGTTCAGAAAAGAGGATATTTATAAGCGGCATAGACTGCTGAGGCATAATGAGGCGTACAAGATAATGTGTCACTTCTGCAAGATGTCGTTCAAACGGAACTTCCAGTTGGGAAAACACGTTCGACTTCATTACACTAAGTATGAATGTCTACGGTGCGACCTGGTCTGCTCTTCAGAAACTAGTGCTGATATGCACGAAGAGTTTCATAATGGCGTTATTAGGACGTGTCCACATTGTAACAGACAGTTTAGACACTTGTCAACATACTACACTCACCTGCGAACTCATAGGAGTCAGTACATGTGTACTCTATGCGGGGACTCGTTCGTCAGCGAGCTGGGCCTCAGCAAGCACATGAAGACGAAGCATCTCAGCCACCTCAACAATCCGGAACTCGCGATGAAGGAGAGCGATGACGTGGTGTACTGTGACGTATGCAAGATCAGTTTCCGGACGAAGGAGGCGTACGACAACCACCTCGCTCACTCTGCCATGCACACGGACCAgaACAAAACTTATCCTATCCTAGAAGACGTGATGAAAGATGAAATTCAGATGAATGAAGAGGTAAAcAAACCCAAGCTTGGAGAGAATTTATGCGCAGTCAGAAAACGCGATCTACCCAAGACTTTTTCACGCATCGGTCATTCAAAACCCACCACTTGTTatattTGCGGCGAGCACTTCAAGACGCAGCAGGCGTACACGAAGCACCACAACGAGAAGCACCCGCGCACGTCGCTGTACTCGCCCGCCGAGCGCGTCGTCTGCGAGATATGCGGCGCACGCGTCGCGCCTGGCAGCGTGGCGGCCCACGTGAACCAGCACACGCGGTCCAAGATGTACACGTGCGACACGTGCGGAAGATCCTTCACAACCAACAACATGCTTAAGAATCATCTCGTGGTCCACACAGGTGAAAAGCCATTTGAATGCAGTCTCTGCGAGAAGCGATTTACTCAGAACGGCAGTCTCAGCCTTCACTATCGCACCATACATCTAAAAAAGCCTTACAAGAGGAATAGAAGAAAGAAAGTCGACGACATAAACTCTGAACACGGACAAGAAGTGTTCATGTCGTCACCGTTTATGTAA
Protein Sequence: MTDLKICRICVGTKAKMYKFDQFQLTYYYEEIMDAEFNKRDGLPQYCCYECATMLHKFYKFKNKCTQAHKLFKELLRKGSLTRDRIYSVKNKITNLSSPLDILRVTKRVKTVTIRCHRQTVDSDFDEEDNEDLKKIKEKEEEKLLKESKLNETFIKVDEPEVYGEVFDDYKPLLSGDEMDMSCDDNDNDATYVPEEPVIIAPSSSKSKSDKKKSHGDSKPVKEKAVAIAKPKKTYRFNKPKKKPTESFLDPNHWRKSLLSEEEALKQFKARADDPKYPLWAYKCNDCIKGFRKEDIYKRHRLLRHNEAYKIMCHFCKMSFKRNFQLGKHVRLHYTKYECLRCDLVCSSETSADMHEEFHNGVIRTCPHCNRQFRHLSTYYTHLRTHRSQYMCTLCGDSFVSELGLSKHMKTKHLSHLNNPELAMKESDDVVYCDVCKISFRTKEAYDNHLAHSAMHTDQNKTYPILEDVMKDEIQMNEEVNKPKLGENLCAVRKRDLPKTFSRIGHSKPTTCYICGEHFKTQQAYTKHHNEKHPRTSLYSPAERVVCEICGARVAPGSVAAHVNQHTRSKMYTCDTCGRSFTTNNMLKNHLVVHTGEKPFECSLCEKRFTQNGSLSLHYRTIHLKKPYKRNRRKKVDDINSEHGQEVFMSSPFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00408806;
90% Identity: -
80% Identity: -