Gpyl021746.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000023.1:8357233-8365425[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0018 2.2 9.3 2.1 11 41 244 271 237 272 0.85 2 10 0.0015 1.8 9.6 0.8 18 41 278 315 276 316 0.95 3 10 0.0015 1.8 9.6 0.8 18 41 322 359 320 360 0.95 4 10 0.0015 1.8 9.6 0.8 18 41 366 403 364 404 0.95 5 10 0.0015 1.8 9.6 0.8 18 41 410 447 408 448 0.95 6 10 0.0015 1.8 9.6 0.8 18 41 454 491 452 492 0.95 7 10 0.34 4.1e+02 2.0 0.2 18 35 498 512 496 523 0.72 8 10 0.015 18 6.4 0.0 18 41 529 566 518 567 0.91 9 10 0.35 4.2e+02 2.0 0.3 18 35 573 587 571 598 0.72 10 10 0.021 26 5.9 1.2 18 41 604 641 591 643 0.89
Sequence Information
- Coding Sequence
- ATGaCGCTAAGCAGATTAAACTACATATGCTTTATATGCAAACATTTGCTAAACAAATGCTTCAACTTCATTCAAAGAACACTGAGAGCTCAAAAAGCATTGAAGGATATGCTTACAGTAGATGACGTTAAGGTCACAGttccaaaattattaaaaatagacaGAGAGAAATATGACTTGGATATCAACCTTAGATGCCAAAAAACTGAAGACAACTATAATGTGTGGGACAGTAACAATAATGATGATTACGACAAAGTCAACCAGTCAAATGAAGACTATGTCGTCAAGAGTGAAGTTAGCGAATCTGGAATTAGTATAACTCTAGATTACAATCTCAAAGCTGATTTTGAAGACACAAGCTACGATGACATTTATGTTGACGATCCGATACAGGTTAAAACAGAAAAGGTTGCCGATGACATTGAAGCCCAAGTAATGCTAGACCCATGTTTTTCTGAGGATGAAGAACCGTTGGTAAAGACACTTCGTAGTGGATCCTACGTAATGAATACGGAATTACCAGATTTCAATGTtaagaataaaacaaagaaagttAAAAGCAAACCAAAAGAAGAACTAGAAGATGGACAAGGCACAGCAACTAAGAGGAAACGGAAATGGAAAAGGAAATCCCAAGTtaggaaaaagaaagaaaaggtTGTTGACCCTAGAACATATCCAATGAAGTGTGAACAATCGCCCCACGTGCTCAAGCAACACGAGCTGACTCACGGCGAGAAGAAGGTGGAATGTCAGCAGTGTGGCAAGATGTTCCACAACGACACGCGGCTCAAGCTGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCACAGCGTCACACTGCTCAAGCGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCACAGCGTCACACTGCTCAAGCGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCACAGCGTCACACTGCTCAAGCGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCACAGCGTCACACTGCTCAAGCGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCACAGCGTCACACTGCTCAAGCGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGCGGTACCTGAGGCGTCACGGCGCCGTACTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAATTGTCAACTTGTTCCATAACGTCACACTGCTCAAGTGGCACCTGAGGCGTCACGGCGCCGTGCTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGCGGTACCTGAGGCGTCACGGCGCCGTACTCATGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCTCATACTGCACATAAGGTCAACTGTCAACTCGTTCCATAACGACACACTGCTCAAGCGGCACCTGAGGCGTCACAGTGCTATGTTCAAGATATGTGACTACTGCAACAAGGGCTTCGTGGCTAGAGAGGACCACATACTGCACATAAGGACGCACACAGGCGTGAAGCCGTTCAAGTGCGTCATCTGTGGTGCTGCGTTTGCGCACCGCGGCAACGTCGCCATACACATGCGCAGCCGCCACCAGCTGCCGCCGCTGGAGGGCGCCCCGCCCGCCCGGGGGAAGAGGAGCAGGGCGTTGGACTAG
- Protein Sequence
- MTLSRLNYICFICKHLLNKCFNFIQRTLRAQKALKDMLTVDDVKVTVPKLLKIDREKYDLDINLRCQKTEDNYNVWDSNNNDDYDKVNQSNEDYVVKSEVSESGISITLDYNLKADFEDTSYDDIYVDDPIQVKTEKVADDIEAQVMLDPCFSEDEEPLVKTLRSGSYVMNTELPDFNVKNKTKKVKSKPKEELEDGQGTATKRKRKWKRKSQVRKKKEKVVDPRTYPMKCEQSPHVLKQHELTHGEKKVECQQCGKMFHNDTRLKLHLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHSVTLLKRHLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHSVTLLKRHLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHSVTLLKRHLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHSVTLLKRHLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHSVTLLKRHLRRHGAVLMICDYCNKGFVAREDLILHIRRYLRRHGAVLMICDYCNKGFVAREDLILHIRSIVNLFHNVTLLKWHLRRHGAVLMICDYCNKGFVAREDLILHIRRYLRRHGAVLMICDYCNKGFVAREDLILHIRSTVNSFHNDTLLKRHLRRHSAMFKICDYCNKGFVAREDHILHIRTHTGVKPFKCVICGAAFAHRGNVAIHMRSRHQLPPLEGAPPARGKRSRALD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752331;
- 90% Identity
- iTF_00752331;
- 80% Identity
- iTF_00752331;