Gpyl028177.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000035.1:3503016-3521549[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-11 2.4e-08 34.5 0.0 3 42 295 335 293 337 0.92 2 2 7.1 2.7e+03 -0.9 0.1 28 40 519 531 519 533 0.86
Sequence Information
- Coding Sequence
- ATGTCCGAAAAACCGGAGCCTGCGAAAACTGAAATAAGTACAATTTTCGGAAGATGCCGCTGTTGCCTGGAGTACGGTTACATGAAGAAAATGTGGGATGAACATTACGAGATGGGTGAATGTGAAATATACGGCGAAATGCTCTTGGAGACTTTTTCCATTGCttgGGACATCTCCACTGACAGCAAGACTTACATCTGTGAGCTGTGCGTGGTGAGGCTGCGTGATGCGTTCAACTTCAAGAAGGAGGTGCTGGCATCTGACAAGTTGTTGCAAGATGATTCCGATAATGAGTTCCAAACAGAAGAAGAGAAATCTGATATATGGTATGATTACAAAGAGGATACAGAACTGAAGAGCGTGGACAACCAAGAGTTGGAGTATGAAGAGGAAAGACTTGAAGAGGAAGGACTAGAAGATGAATCGGACTCCCAGCAGGACACGGAGGAGTATGAAGAAGTGGAGTACCTTGATGAATATGCTACGGAGGTTGCGGGCAATTCGGCATCCAGCAGTAAAAAAACGGGTGGTGGGAAGTGGCCTCGCAAGAAGAGGTCACACAAAGTCACCAGGCCATATAAGgagGACCTTACGCCAGAGCAACAAAGGCGCATGATACGGGCGGAAAAAATGCGCATATTCAGGCagaatttgaaaaaagatccAGTAAGGTACGAGCTATTCAAAAAGAAGGATTTAGCAAgaaaagtgaaagtgaaaaagCCAGAACTGTCTGAAAGTGAGAAGGAAGAGAAGAGGAAGCTGTGGCGGGAGCAGAAACGGAAGTTGAAAATGAAGAAGGAACTTCAGGCGGCTGCTAGTAAGCTGCAGGAGGCGAAGAGTGTTGAGGATTTGGACTTAATTGAAAGTAACTACTCGGTGGATGACATGAGGAGTGCCCTGGAGGCTGTGACGGGGGGCGAAATGTCAATCCTGGAGGCGTCGAAGAAGTACGGAGTGCCGAGGAAGACGATTGCCGCTAAGGTGCTCAGTTTGAAGAATAACACTTCAGGCAAAGAGCCAGATGTGATAGCAACCCTGGCGAGAGAACAGCTGAACCTAAAGAGGTACCGTTACCTCGGCGGTGACGAGGTGTACAAGCACAAAGAGAACGTGCAGAGCATAATAGCTTGGTCTAACGCCACCCCTATCAAGGGACACGACAAATCCGGCTTCGGTTGTTGCTTCTGCAAGCAAACATTTAAACTAGCGACTCAACTCAAACAACATACAAGATCGGTCCACAAATCGACCCTTGCGGCACTCCACACTAAACACACGCTGCAGTGGATTTTAAGGATGGATATGACGGAACTGAAATGTACAATTTGCAACGAAGACACGAGGAAGATTGAGGAATTGCTGGAGCATTTGAAGTCGCACGATAAACCGGTTCACACGGATATAAAGAATCAGATAATACCTTACAGCTTTCCGGATAACAAATTGCAATGCATTGTCTGCACTAAATCTTTTGAATTGTTCCTGCCGCTGACTACCCACACTATATCGCATTACAAGGTCTGCGAGTGTCCTGAATGTGGCAGGGGTTTTATAAGCCGGAAAACTTTGTCAAGGCATCTTATTAGGCACGAGCGTGAATTGTTCAAATGCAAGTTCTGCGGTAAGAATTTTAAGAATCGCGAACGGGCGATGGTTCATGAGAGGCTGAAGCATAAGTTGGGGGATAGGAGGAGGGAGTTACCGCCGTCTACGTTTTTGAAGTGTGATGTATGCCTGAAGAAGTTTACGACGAGTTTGCAGTTGTCGCAGCATATGAGTATGATACATTTGAGGGTGAGGAGGTTCGTTTGTGAGCACGTGGGGTGCGATAAAGGGTTCTATTTGAAGAAGGATCTGGAGGATCATGTGTTGACACATACGAAGGAGAAGAGGTTCGTGTGTACATTGTGTCCAAAGATGTATACACGTCGGAGGGCGCTTGTGGAGCATTTGAGAGTGCATGCGGTTGATACACGATATGTATGCGACTTTTGTGGGCAAAAGTACGTTCGGGCCCAGTCTTTGAGGTATCACCTGTTACGGAAGCATGGGGGGTTGAGCGTGTGA
- Protein Sequence
- MSEKPEPAKTEISTIFGRCRCCLEYGYMKKMWDEHYEMGECEIYGEMLLETFSIAWDISTDSKTYICELCVVRLRDAFNFKKEVLASDKLLQDDSDNEFQTEEEKSDIWYDYKEDTELKSVDNQELEYEEERLEEEGLEDESDSQQDTEEYEEVEYLDEYATEVAGNSASSSKKTGGGKWPRKKRSHKVTRPYKEDLTPEQQRRMIRAEKMRIFRQNLKKDPVRYELFKKKDLARKVKVKKPELSESEKEEKRKLWREQKRKLKMKKELQAAASKLQEAKSVEDLDLIESNYSVDDMRSALEAVTGGEMSILEASKKYGVPRKTIAAKVLSLKNNTSGKEPDVIATLAREQLNLKRYRYLGGDEVYKHKENVQSIIAWSNATPIKGHDKSGFGCCFCKQTFKLATQLKQHTRSVHKSTLAALHTKHTLQWILRMDMTELKCTICNEDTRKIEELLEHLKSHDKPVHTDIKNQIIPYSFPDNKLQCIVCTKSFELFLPLTTHTISHYKVCECPECGRGFISRKTLSRHLIRHERELFKCKFCGKNFKNRERAMVHERLKHKLGDRRRELPPSTFLKCDVCLKKFTTSLQLSQHMSMIHLRVRRFVCEHVGCDKGFYLKKDLEDHVLTHTKEKRFVCTLCPKMYTRRRALVEHLRVHAVDTRYVCDFCGQKYVRAQSLRYHLLRKHGGLSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00752395;
- 90% Identity
- iTF_00752395;
- 80% Identity
- iTF_00752395;