Gpyl003731.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000003.1:11059207-11059665[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-12 8.8e-10 39.1 0.0 2 39 11 50 10 55 0.90
Sequence Information
- Coding Sequence
- ATGCCAAAGACACCAAAAGTTCaatatagcaaagaaaatttgcaaaaagCGATCGAAGCTGTGCAAGATGTATCCAACAATTTATCTACAAGACAAATTGCTGAAAAATATGGTGTTCCGAGGTCCAGTCTCCGTTACCACATAAAAAATCCCGGACATAAAACCAGCTTAGGGCCATCACCTATATTAACAGTGTCTGAAGAAAGTAATTTAGAAGATTGGTTAATAATTTCAGCAAGAAAAGGATTTCCCCGAAGCAAAGAAGACATTTTGGACACCGTGCAAAAGTTCCTGGAAGAAAACCCGCGGCCTAattcatttttacataataGACCAGGAGATGGTTGGTGGAAGGCATTTTTGAAGAGACATCCAAAGTTATCAATAAGAACATCAGAAGGAACATcagctaaagaaatatttgatatagTTAATAAAGCCAAAcgcaatttattttga
- Protein Sequence
- MPKTPKVQYSKENLQKAIEAVQDVSNNLSTRQIAEKYGVPRSSLRYHIKNPGHKTSLGPSPILTVSEESNLEDWLIISARKGFPRSKEDILDTVQKFLEENPRPNSFLHNRPGDGWWKAFLKRHPKLSIRTSEGTSAKEIFDIVNKAKRNLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01491817; iTF_00822885; iTF_00011885; iTF_01338556; iTF_00822957;
- 90% Identity
- -
- 80% Identity
- -