Gpyl011103.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000010.1:3612828-3617914[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 5.5e-08 33.3 0.0 2 38 16 52 15 58 0.91 2 2 9.5e-05 0.036 14.7 0.0 4 41 418 455 415 457 0.86
Sequence Information
- Coding Sequence
- atggTTAACAACTATAAAAGGAAATCGGACAGGCAATCCTGGCGTGAGGAGGACATGAAAAATGCCATTGAAAAAGTAGCTACGCGCAAAATGGGGCTTAACAAAGCGGCCGCCACATTTAATGTTCCAAAGACTACATTAATAAGAAGACTTACCAAATATGAGAGCACCAAAGACTTAACTGTAGCTACGGAAAAGAAAATGGGCAGGATGAAACCCGAATTGATGCTAAATGCTCCACGAGGATCTTCGGCGTTTTGTCATGAAAGCGGGTGGATTCAAAAAGATATTTTCACAGAGTGGTTCAAGAAGTTCATCAAATTTTCAAGAGCGTCAGCCGATAATCCAGTCTTGCTTTTGCTTGATGGGCATGCCAGCCACATGAAAAATATGGAAGTTATCGATTTAGGACGGGTCAACGGCGTGCATGTGCTTTCATTTCCGCCTCACTGCACACATAAGCTTCAACCCTTAGATGTGGGATTTATGAAACCTTTTTCGACTTATTATACAGAAGCCGCAAATACCTGGCTGAGATTAAATGCGGGTAAAGTAATAACCCAGTTCCAAATTGCAGAGCTTGTCGACAAAGCCTTCCAAAAAGCTGCAACGTTATTAACTACTTATAACGCTTTTCGAGCCACCGGCATCTGGCCGTTAAACCCTGACGTATTCACAGAGGCAGACTTTTTAGCAGCAGCGACCACTGACATTGATATGCCAGAAGCAGCGCCAAGGGATAATGAACCTGAACCAATAGTGATTCAACCTGAAGAAACGCCCCTCATCGATGAACTTGGATTGTCAGTTTCTGACGATCATGCAACTATTGAATTAAATAGGACACCGCCTCTCGTCAACGATGAGATAATTATAGCGGAAGCTGGCATGTCTAGCAATGAAGGCATCAATGAACTATCTAGAAATGATGAACCCCAGCCATCTACGAGTACATCATTTTCTATTGCTCCAAAGGATATTATGCCCATACCTAGAACTTCTAAACGGACTAGAATTAATATAAAGCGTGGAAAGACAGTGGAAATAACATCCTCACCTTATCGCGAAGAATTAGAAGCCACTAAAAAAGCACAGGAAATGAAAGAAAATGCAAAGAAGTGCCCCGCATGTTTTTTATGGGCACACTGTAGTTGTGCCGGTGTCGAAGATGATGATAAAGATGTTAGATTTGTTTGCGAAAGAATGCCACGGAATAGAAGCCAAGGATTAAAGGTAAAATGGAGCCAAAATGATTTAACCAGGGCATTCCAACTCGTCGATGAAGGGACACCAATAAGAGAAGCGGCTCGTTTTACTAAAATTCCTTTTTCAACCCTTCAAGAGAGATTGAAAAAGAGAAACACTGATTTTCCGTCTCTGGGAAGGAACCCAATTTTCACAAAGGAACAAGAAGCGGATATGGCAGACCAAATCACGCCCCCGGTCACCCGCATACCTCAGTGGGCTACTGAGGAGCAAGCGCTCGCGCCGAACGGTTGTTTTATTCAATGTGCGTGGTATTTACTGAATCATGGATATATCAGATCTAAACAAGATATTTCGCAGGAAGACTTACGAGATATTGACGCCTTAGAAGCTATTATTTTTAGGGAGATAAATAATTTGGAGTCAAAAACTAATTATTCCGAAGAAGAAAATAGTGACGAGAGTATCCTACCGACAAAAAAACGTCACCGTCGTCGTATTATTGCAAGTAGCTCCGAAAGTGAGTCTGACTCAGTTGAAAATTATGTCTCTAATCAAATTGCTCATATAGAAGAAACATATAATACGGTACAAAAGTGGACACGACCACGAGGACATCAGCCATCCGTCAACCATTCACGGAACAGTTGGTTCCGTGAATGGTATGAAGCTACCATATGCAAGAGAATTGAAAAACGGTACAGAGGGAGAATATTATAG
- Protein Sequence
- MVNNYKRKSDRQSWREEDMKNAIEKVATRKMGLNKAAATFNVPKTTLIRRLTKYESTKDLTVATEKKMGRMKPELMLNAPRGSSAFCHESGWIQKDIFTEWFKKFIKFSRASADNPVLLLLDGHASHMKNMEVIDLGRVNGVHVLSFPPHCTHKLQPLDVGFMKPFSTYYTEAANTWLRLNAGKVITQFQIAELVDKAFQKAATLLTTYNAFRATGIWPLNPDVFTEADFLAAATTDIDMPEAAPRDNEPEPIVIQPEETPLIDELGLSVSDDHATIELNRTPPLVNDEIIIAEAGMSSNEGINELSRNDEPQPSTSTSFSIAPKDIMPIPRTSKRTRINIKRGKTVEITSSPYREELEATKKAQEMKENAKKCPACFLWAHCSCAGVEDDDKDVRFVCERMPRNRSQGLKVKWSQNDLTRAFQLVDEGTPIREAARFTKIPFSTLQERLKKRNTDFPSLGRNPIFTKEQEADMADQITPPVTRIPQWATEEQALAPNGCFIQCAWYLLNHGYIRSKQDISQEDLRDIDALEAIIFREINNLESKTNYSEEENSDESILPTKKRHRRRIIASSSESESDSVENYVSNQIAHIEETYNTVQKWTRPRGHQPSVNHSRNSWFREWYEATICKRIEKRYRGRIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -