Basic Information

Gene Symbol
osa
Assembly
GCA_037074685.1
Location
JAYKKO010000010.1:6043585-6063034[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-25 7.4e-22 78.5 0.0 2 89 244 328 243 328 0.94

Sequence Information

Coding Sequence
ATGCCGCCGCGAACGTCATCGTCGCTGCCGGACGGCAGCGGGCCCCCAGTGCGGCCCGGGGGTCCCGGCACGGCGCCGGGCCCCGCGCCCAGCCCGGTGCCGCCCCCCGGCGCAATGGTAGCGCAGCCGTACTCGCACCACGCGTACAAGACGGCCCACTATCCGCCGCAGCCGTACGCGTACCCGCCCCGCAACCACCATCCGTACCCGTACGGGTATcagccgcgcccgccgccgcaTCCGCCTCAGCACTACCCGCCGCTAAAGCAACAGCCCAGGCACATGGGACCGCCGACGCCAGGCGGGGGCCAGGGCCCCCCCGGCCCCGGCCCCGAGGGCGCCATGCCGCCGCCCACTGCGCCCGGCGAGGCGCACGACAACGGCCCGGCCGCGCCCGCCACCGCGCTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGATGAGGGCAGCCAGCAGAGCACGCTCAGTAATGCATCAGCAGCGTCAGGCGAGGAGCCGTGCGGAACTCCTAAGGGGTCTCGCAAGGAGTACGGCGCTAGCAGTGCGGCGCCCTCCCCGTCGCCCGGCGGCGGCAGCCACTCCTCCGTGCACGACGACTACGACGCCTCGCCGAACTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGAGCTTCATGGAGGACAGGCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTAGACTTGTACCGGCTGTATCTCCTGGTGCGCGACCGCGGCGGTTTCGTCGAGgtGACGAAAAACAAAACGTGGAAGGACATAGCCGGCCTGTTGGGCATCGGCGCGTCTTCATCTGCGGCGTACACGCTACGCAAGCATTATACCAAGAACTTGCTGGCGTACGAGTGCCACTTTGACCGCGGCGGCATCGACCCCCAGCCAATCATTAACCAGGTCGAGGCCTCCACCAAGAAGAAGGGCAGCAAATCAAATAGCAACTCTAGTGCAGGGTCATCAAATTCACAAGAGTCATTCCCGggaggcggcgcgggcggcggcggcgcggccaTGGACGGGTACGGCGGCCAGTACGCCGGCTACCCGCCGCAGCCCAACCAAGCACAAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCCCGGAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATACGGATCTCCCTATCAACCGAATAGACCAGTTTATCCGCCCTACGGCCCCGATGGTGACAgGGGGTACCGAGGGGGTGGCGAATACCAGTACGGCGGGTACGGCGGCGGGTaccgcggcgcgggcgcgggcgcgggggcgggcgcgggagcggcggcgggcggcggcgcggcgggcggcccCGCGCCGGCCGgcacgccgccgcccgcgcagcCCTACCCCGAGTACTACCGCGCGCCGCACCCGCAGCACCCGCAGCATCCGCAGCACCCGCAGCATCCGCAACACCCGCAGCACCCGCAGCATCCGCCGCACTCGCCGATACAGCCCCATCAGCCGCATCAGCCGCATCAGCCTCACCAGCCTCACCAGCCTCACCAGCCGCCGCACGAGATGTCGGGGGCGCAGCAGTCGGTCGGTAACCTAATGAGCTCGCAGCTCGCTCGCCAGCTGGTCGCGCCGCTGCCGCCCAACCCCAGACCCTACTACGGAGGCGCGAAGCCGATGGGAGCGGGAGCGGGGGGCCCGCCCGCGAGCGGCACGCCCCGCCGGCACCCGGACTTCGCGAAGGCCGAGAGCGGGTACGGCGGCGTGGCGGGCGACGGGCGCGGCGCGGCGACGGGCGCGGGGGCCGCGGGGCCCGGCGCGCCTGCGCCCGCGCCTCGCTTCCCGCCCGCCTGGCCGCAGCCCTACCCGCGCGCGCAGCCGCCCTCGCCGCAGCCGCCCTGgcgcccgccgccgcccgcgcagcCGCCGCCCGCCTGGCCGCACCAGCCGTACCAGCCTCAGACGGCGGGTGCGCCGGCGTGGGGCGCGCCGCGGCCGCCCGCGCAGGACGCCTTCGCGTGCGCCGCGCCCTCTCCCAATACGCAATCAGGAATGGCACCTGGACAAATAAAACGAGAATTGACCTTTCCCGCCGAGTGTATAGAGGCGACGGTTCCTACGGGCGAGAAAAGGCGAAGGCTCACGAAAGCGGACGTCGCGCCCATCGACGCGTGGCGAATCATGATGGCGCTGAAGTCCGGTCTACTAGCCGAGACCTGTTGGGCGCTCGACATACTCAACATACTCCTCTTCGACGACAACTGTATAGGCTACTTCGGGCTACAGCACATGCCCGGCCTTCTAGATCTCCTGCTAGAACATTTCCACAAGAGTCTCAGTGACGTGTTCGACTCGCCCTTGCCTGAGGACGATCCTTGGTACGCGCCGCCTGCGAGTCCCGAGCCCACGATCACCGAGCGAAAGAAACTCGAGCCGCCCGACCCCACCGAGCGCGTCCGAGTTCTAAGCGGCGACAACTACACCCTCGAGACGCGACGGCGCCAGCCCGTCACCCTAAAGCCAGACGACGAGCTGTTCGCGCCCGACGAGTGCGACTCCGACGCCGAGCACGTCGAGGACGTCCTCGAGCCCTGGCAGTTCGGCGGCGACGCGGGCGGCGCCGCGCACCTCGTGCCCTGCTTCCGCGGCGAGTCCATCCACCTCCCCTTCGTGCGCGTCATGCCCGGCGTGCGGCCGCcctcgccgcccgccgccgTCGCCCCCGCGCCCGCCCCGCCCCCCGCGCCGCTAGACGACGCGCCGCCCgccccgcccgcgcccgcgccgcccatAGCCGACGCCGACACGGACAACCTCGAGGCCGAGCCCATGGACCTCGAGCCCGAGAGGCGGCCCGACCTCCGGATAAAGGACCCCGCCGGCGTCCTCAAGCGACGCCGCCCCGAGGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTGATCGACGAGACGCGCGACTCCCTCGCGAAGCGCTGCATAGCGCTCTCGAACATCCTCCGCGGGCTCACGTTCGTGCCCGGCAACGAGGCGGAGTTCTCGCGGTCGGGCGCGTTCCTGGCGCTCGCCGGCAAGCTGCTGCTGCTGCACCACGAGCAcgcgccgcgcgccgcccgcgcccgcgcctaCGAGCGCGCCGCGCGCGACGAGGCCGACGTGGACGCGTGCTGCTCCAGCCTGCGCGGCGGCGCCGAGTGGTGGTGGGACGCGCTCGCCCAGCTGCGCGAGGACGCGCTCGTCTGCTGCGCCAACATCGCCGGCGGCGTCGAGCTCGCGGGCCAGCCCGAGGCGGTGGCGCGCCCGCTGCTCGACGGCCTGCTGCACTGGAGCGTGTGCCCGGCCGCCGTCGCGGGTgacgcgccgcccgccgccgccgccggctcGCCGCTGTCCCCGCGCCGGCTCGCGCTCGAGGCGCTCTGCAAGCTGTGCGTGACGGACGCGAACGTGGACCTGGTGCTGGCGACGCCGCCGCGCGGACGCATCGCGCTGCTGTGCGCGGGCCTGGCGCGCGACCTGTGTCGGCCCGAGCGGCCGGTGGTGCGCGAGTTCGCCGTGAACCTGCTGCACTACctggcgggcgcgggcggcgcggcggctcGCGAGGTGGCCCTGCACGCGCCGGCCGTGGCGCAGCTGGTCGCGTTCATCGAGCGCGCGGAGCACACGGCGCTGGGCGTCGTGAACCAGCACGGCGTGGCGGCGCTGCGGGACAACCCCGACTCGATGGGCACGTCGCTGGACATGCTGCGGCGCGCGGCCGCCACTCTGCTGCGGCTGGCCGAGCACCCCGAGAACCGGCCGCTGATCCGGCGGCACGAGCGGCGGCTGCTCGCGCTCGTCATGAGCCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTCTACCACTGCAGCCAGGCGCGAGACGCCGACCGCGACGACCAGTAG
Protein Sequence
MPPRTSSSLPDGSGPPVRPGGPGTAPGPAPSPVPPPGAMVAQPYSHHAYKTAHYPPQPYAYPPRNHHPYPYGYQPRPPPHPPQHYPPLKQQPRHMGPPTPGGGQGPPGPGPEGAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEPCGTPKGSRKEYGASSAAPSPSPGGGSHSSVHDDYDASPNWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLSFMEDRRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGSKSNSNSSAGSSNSQESFPGGGAGGGGAAMDGYGGQYAGYPPQPNQAQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRGGGEYQYGGYGGGYRGAGAGAGAGAGAAAGGGAAGGPAPAGTPPPAQPYPEYYRAPHPQHPQHPQHPQHPQHPQHPQHPPHSPIQPHQPHQPHQPHQPHQPHQPPHEMSGAQQSVGNLMSSQLARQLVAPLPPNPRPYYGGAKPMGAGAGGPPASGTPRRHPDFAKAESGYGGVAGDGRGAATGAGAAGPGAPAPAPRFPPAWPQPYPRAQPPSPQPPWRPPPPAQPPPAWPHQPYQPQTAGAPAWGAPRPPAQDAFACAAPSPNTQSGMAPGQIKRELTFPAECIEATVPTGEKRRRLTKADVAPIDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLSDVFDSPLPEDDPWYAPPASPEPTITERKKLEPPDPTERVRVLSGDNYTLETRRRQPVTLKPDDELFAPDECDSDAEHVEDVLEPWQFGGDAGGAAHLVPCFRGESIHLPFVRVMPGVRPPSPPAAVAPAPAPPPAPLDDAPPAPPAPAPPIADADTDNLEAEPMDLEPERRPDLRIKDPAGVLKRRRPEDYEDECYTRDEPSLNLIDETRDSLAKRCIALSNILRGLTFVPGNEAEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEADVDACCSSLRGGAEWWWDALAQLREDALVCCANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAAAGSPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIALLCAGLARDLCRPERPVVREFAVNLLHYLAGAGGAAAREVALHAPAVAQLVAFIERAEHTALGVVNQHGVAALRDNPDSMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLALVMSQILDQKVAHELADVLYHCSQARDADRDDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00408177;
90% Identity
-
80% Identity
-