Gcon034131.1
Basic Information
- Insect
- Glossosoma conforme
- Gene Symbol
- nfxl1
- Assembly
- GCA_003347265.1
- Location
- PZYU01051182.1:1-7185[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 4.5e+04 -7.4 5.6 15 19 174 178 173 178 0.81 2 14 0.048 1.1e+03 1.1 0.4 4 10 209 215 208 215 0.96 3 14 5.5e-08 0.0012 20.1 15.9 1 19 223 240 223 240 0.99 4 14 2 4.5e+04 -5.5 3.3 15 18 249 252 246 254 0.61 5 14 6.5e-06 0.15 13.4 12.5 4 19 279 294 276 294 0.92 6 14 0.19 4.3e+03 -0.8 0.4 5 10 318 323 317 323 0.95 7 14 0.0003 6.8 8.1 9.2 4 19 332 347 329 347 0.92 8 14 2 4.5e+04 -4.9 2.7 13 18 374 379 372 380 0.67 9 14 3.2e-07 0.0072 17.6 16.5 1 18 414 431 414 432 0.97 10 14 1.1e-07 0.0024 19.1 16.6 1 18 441 458 441 459 0.97 11 14 0.00091 21 6.6 7.1 9 19 507 517 506 517 0.91 12 14 0.013 3e+02 2.9 7.0 3 11 527 535 526 536 0.87 13 14 0.43 9.7e+03 -2.0 5.0 14 18 564 568 564 569 0.91 14 14 0.017 3.9e+02 2.5 8.5 1 12 605 616 595 616 0.91
Sequence Information
- Coding Sequence
- ATGGCGGAAAGACGTGGAAGTAGTACCTCTTTGGAAGAAGAAGAGGAACAAGATCGACCATCGACAAGTAAATCAGATGAAGAGGAGATTTCCCCAGAAGCTACGATGGTTGACAGTCGCGCACGATTTGAGAAAGCTAGTGCAATGCTTCATGCATCAGTACTAAGACATGTGAATTATGAATCCTCTTCCGAGGAAGAAGGCTTggaagataataaaattattgattcggTCGTAAGTGTGTACTTTGGAAAAAATGAAAACCCGATTTTAGGAAGAACAAAGGGTTTCCTCGATCAAGCCTTTCAATCCGGAGCCACTATATGCTTAGTCTGTATTTGTTCTGTAAAAAGAACCCATCAAATATGGAATTGCCTGACTTGTTTCTCGGCATTTCACCTACACTGCATACAGCGATGGGCAACCGATGCAATTTCTATAAAAACACGTAACGATGAGTTACCTCAGATTATATCCTTGCCCTGGAGGGATAACAAAAACGATTTGAATGACTGGTGTTGCCCAAAATGCAGATTTAGGTATAGCAaggcaaATATTCCAGATCTGTATAGGTGTTATTGCACCAAGACAACAAATCCAGAGTTTGTACCGTGGCTCATACCACATTCTTGCGGTGAAGTCTGCAGGAAACCTCTAGTACCCAAATGTGGGCACAAATGTCTCCTTCTTTGTCATCCAGgTCCCTGCCCGACATGTCCGTTTACAATTTCAAAGAAATGCAACTGTGGACAGTGTGCTCCGATGCCGGTTCGGTGCAGCACCGGTAACTGGAGCTGCTGGCAGATGTGCAGTAAACTGCTGGACTGCAAGGCCCACACCTGCCAGCTGACCTGTCACTCGGAGGACTGCCCCCCGTGCACCCTCACCAAGCTGCAGGCCTGCATATGCGGCAGCTCCACACAGAGGATCCCATGCAGGCAACACGTGTGGAAGTGTAACAAGGTGTGCTCAAAGCTACTCTCTTGCAATTTCCACACATGTGGAAAAATTTGCCATAGTTTAGATTGTGGTGACTGCCCGATGACAGGTCTCCAGAGGTGTGCGTGTGGAGCCGTGCAGCAGGAAGTGAAGTGCCCCGCACGCGTGCCGGCCTGCGGGGGCACCTGCAGCAAGTGCCTGGTGTTGCTGGAGAAGCGATGCCGGTGCCTATTGCATACGAAGGAGCTCCCCTGTAACAAGGAGTATATATGTGAAACAAAGTGTAAGAGTCTTAAAGACTGCGGCCGCCACGCTTGCAACAAGAAGTGCTGTGACGGGCCGTGCTCCCCGTGCGAGAAGACCTGCACCCGCACCTTGCAGTGTGGTCGCCACAAATGCCCCTCCAGGTGTCACCGCGGCCCGTGCTTCCCTTGCCACCATGAGGTTCGCGTGTCTTGCCGCTGTGGTTGCACAAGCTACGCGGTTCCCTGTGGCCGTGAGAAAAATGTTAAACCACCCAGGTGTAACAACAACTGCAGCATTCCACTACCTTGCACTCATGTTACCGAAAACGTACATAAATGTCACTTCGGGCCCTGCCCCGAGTGCAAGGAGATCTGCCAGAAGGTGCTCGATTGCACTCACTCCTGCAAAGCTGTCTGTCACCAAGCAGTCACTATAACTATCCCACCTCCTAAAGCTGCTGTGCCATGGGAAATTCAAGCACCTAAGgtgGAAGTAAAGGCACTTCCATGCCCACCGTGCATGGTCCCAGTGATCCGGCCGTGCTTGGGATTCCACGAGAAGTCCCAGTGGCCGTGCAGCATGGCGCGCGTGGCCTCGTGTGGCAGGATCTGCGGCCGGCAGCTTGCTTGCACCAACCACGCTTGTTCGCGTGAATGTCACAGTGTCGACGATTTGCCTGATCCATCCAGCAAAGAG
- Protein Sequence
- MAERRGSSTSLEEEEEQDRPSTSKSDEEEISPEATMVDSRARFEKASAMLHASVLRHVNYESSSEEEGLEDNKIIDSVVSVYFGKNENPILGRTKGFLDQAFQSGATICLVCICSVKRTHQIWNCLTCFSAFHLHCIQRWATDAISIKTRNDELPQIISLPWRDNKNDLNDWCCPKCRFRYSKANIPDLYRCYCTKTTNPEFVPWLIPHSCGEVCRKPLVPKCGHKCLLLCHPGPCPTCPFTISKKCNCGQCAPMPVRCSTGNWSCWQMCSKLLDCKAHTCQLTCHSEDCPPCTLTKLQACICGSSTQRIPCRQHVWKCNKVCSKLLSCNFHTCGKICHSLDCGDCPMTGLQRCACGAVQQEVKCPARVPACGGTCSKCLVLLEKRCRCLLHTKELPCNKEYICETKCKSLKDCGRHACNKKCCDGPCSPCEKTCTRTLQCGRHKCPSRCHRGPCFPCHHEVRVSCRCGCTSYAVPCGREKNVKPPRCNNNCSIPLPCTHVTENVHKCHFGPCPECKEICQKVLDCTHSCKAVCHQAVTITIPPPKAAVPWEIQAPKVEVKALPCPPCMVPVIRPCLGFHEKSQWPCSMARVASCGRICGRQLACTNHACSRECHSVDDLPDPSSKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -