Gcon024974.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossosoma conforme
Gene Symbol
-
Assembly
GCA_003347265.1
Location
PZYU01006059.1:36657-44068[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.19 23 7.0 3.3 1 23 1368 1391 1368 1391 0.91
2 13 0.084 10 8.0 6.0 1 23 1485 1507 1485 1507 0.97
3 13 9.5e-06 0.0012 20.5 0.9 2 23 1510 1531 1509 1531 0.96
4 13 0.00043 0.054 15.2 1.0 1 23 1537 1559 1537 1559 0.98
5 13 0.00072 0.089 14.6 5.3 2 23 1566 1587 1565 1588 0.95
6 13 0.14 18 7.3 2.0 5 23 1601 1619 1599 1619 0.96
7 13 0.0014 0.17 13.6 2.5 3 23 1626 1647 1625 1647 0.97
8 13 2.7 3.3e+02 3.3 0.7 2 23 1663 1683 1662 1683 0.95
9 13 0.00015 0.018 16.7 1.2 1 20 1689 1708 1689 1711 0.92
10 13 0.0097 1.2 11.0 0.5 1 23 1719 1741 1719 1741 0.98
11 13 0.018 2.3 10.1 7.3 1 23 1747 1769 1747 1769 0.98
12 13 6.8e-06 0.00084 20.9 1.1 1 23 1775 1799 1775 1799 0.97
13 13 0.0014 0.18 13.6 5.2 1 23 1805 1827 1805 1828 0.95

Sequence Information

Coding Sequence
ATGGAGCGCCAAGTGCAGTGCCCCGTGTGCACGCTGTACCTGCACGAGGGCATGTTCCTGCAGGCGCATCTTGACACGCACCCCAAGGACCAAGTGATCCAGGCGCTCTGCAGCCTCGCCAAGAGCGGGAAGTCCTCTTCCCACTATGGCAGCCGCGGCAGCACGCCGTACGCCTCGGAGCGCTCCTACAGAAGTCGCTCGCGAACGCCGGCCACCTGCGACAGCCGCCACTACCACCACCGGCCGCCGCGCTCCTCGCGCCCGCCGAGCCGCTCGCGCTCCCCGACCGACTACCGCCCCTCCATCAAGTCCAACAGTTCTTCGGAGACTTCTCCGTCCAACAAAAACGACTCTTTCCAATCGTCGAGACACGGGCACGAGCCGATGCGCATAGTCAACACCCCTCTGCAGTCGGACTCGGGATATGCGGACAAGACCGACTCCGTCTTCGGAGATATCGCCGACAAGCCGCACCATCAGACCAAACACCCGAGAGAAAGGCCGGCCAGCGTCACCTCCCCGGGCTACGCGCGCCCCGGGGACGTCTTTATCAAAGAGCCGGATTCGGAGACGCGAACTTCCTTTGCTCAGCCGTGTCCGTATCCTAATAAAGCGGCGTACAAAGATGAAACGTCCAAGAGAAATGATGGCATTCCGATGCTGAAGCGTCTTCCGCTTAAAAATCAAGACGGAATATCAATCGACTGTGTCAATCCGGGAGCTCAGCCTTACTCGCCTAACTCCCACAAGAACATGCTCATATCCTCCGCTCTGCCGGGACCGAGCTCTGGGAAGAACTTCCTCTTCGCTAATCAGTTTGCCCCGATATCGAGTGCCTCTCCCTCGAGGACTTTCACGAGACACGGAGACGCCGTCTACATAAAAGACCCGGCGAGCGGTGATTCGGAAACGATGGTCGCTTTCGTGCAACCGATGATGGCCGCCCAGTCTGCTTCGTGCGCTTATTCCAACAGAACGGATTTTAAAGATGACGTGAAAAAGATTGACCCCGCACCGGTTTTAAAACGTCTTCAATATATAAATTCGGATGTCAAGCTGAGTTCGGACTCTATTCATATTGTCAACTCGCATCTCCGGCCGGACAACTTTGTTGAAAAATCTGATGTCGCTTTCAAAGCGGGAGACTCGTCCCAACAGCAGGTCCCGCATCAGTCCTCGTCCAAGCACATGAAAGACCGAGCCGACGCGAGCACGCCGACTCGAAACTTTACCCGGCACGGGGACCTCGTGTTTATTAAAGATACGGCGAGCGGTGATGCTAAAACGGCCGGTTTCGTTCAGCCCAAAATGACTGTCATGCAGCCGACATCGTGCGCGTATCCCAACAAGACGATGACAAAGGATCGCGAGTGCTCCGTGGACATCTCGACCGTGAACGACAATCTTCCTATGTTGAAACGTCTACCGTACGTTAATCCCGAAGGGATCACCTTGGACCGTATGATTCCCGCGTCTCAGCCGTACGTGCAGTCGTCCCACAATAATATTGTCATCTCCTCTTCTCTGCCGGGCCCCGGTTCCGGCCACGGCGGCAAGAGCATCCTCGGATCTCTGTTCTCTAATCAGTTCGCTCCGATATCGACGGCTTCGTTTCAACGGAACGCCACAGTGACAAATCAAAACTCTCCAATTTTTTACCAGGAAATTCGCGAAGTGGGCGGAAAACAGGTTCTGTCTGCCGTCCCGGTCAGCGGCAACCGAGAAGAGGCCGCAGCGCAGGCGGGGAACGTTCACCAGAATGTTATGTTGTACAATCAATATTCCGGTAGCTCGGCCTGCGTCTACCCGCAGCAGTCAGCAGGCAGTAATGTGAATCAGTGCTATTCGGATGTGACTTTGAGTGCGCAGTCGTTACAGACGGCCTGCAATAACTTTTCTAATAAATTACCGATGAACGTCGACGGACACAGCATGCTCAATATATATGCGGACATTTCCCAAAACCTTCACACCGAGACCCGGCACTCTGACAATAGTATAAACGACAAGTCGGTCGATTCCAATTTGACCGATCTGATAGAAATAATGCCGGACCGGAGCAACGGCGAGGTGAACGACAACGCGAGTACCAAGTCTTCCGGAGTAAAGATCCTCAGTAATATCAAAGTCGAAATACCGATGAGCAACAACAACATGATTCCCGAGATCATCGACCTCACGCTTGCTCACGACTTGCAGAGAAAGAAAATGTTGCCCGAGATCGCCGAGCCCAATCTCAATGAAGACGAGGCCATCTTACCCGACTACGCCGACGAAGAACTGAGCGGCTCCTATTCGCCCGGCCGCTTCTCCAACAGAGACGACTACTCCGGGTCTCGATCTGTGATAAGTTCCTCTCCCCTGGACGGCTCGGTGGCCGGCCTCCCCGTTCCCGTGGAGATCACGTCATCCAAATCGGGATTGCAACCTGGTGCTATTGTTAACACGTTCTCGGTTATCAAAAATATAGGAAATCCCAATTTGTACAAAGACAGTGTGGCGTCCTCCTCGCAGAATCCGGACTGCGATGAAAAGGCTTCGGAGCAAGAGCAGATCCTGCCCGACCTCACCTGCAATGAGAAACCTTCCATATCTCCCTGCAGCGACCTGACCAACGACTCCAACGAGGAGCCTTACGAGAGACTGTGCGCCGTCCCGCAGTCTTCAAACCATCCCGACAAACCCTCCGGCAACGTGAGCAGGTTTCCTCTCTCGATGGTGACGAGAAGCGTGGCTAGAAAAAATTTGTTCATCAAAAAACCGAGAAAGATTCTCGCCATTAAGAATTCTAAATCCAACGTGAAACACGTCGACAAGGCTTCCTCATCATCGTCGGTGTCTAATTTGAAAACTTCGACGCCGAAAATTGTACCGTCTAAAAAAGATGACAGGAGGCCTGAAACGTCTCTGACCGGCACCGGGAGAttagacgttttttttaaagagatagataaatttaaaaagggcTCAGAATTGACGATCGTTCCCTCCGGGCTGTCTGATAAGTCGGCTCTGCAACTCGAATGCAGATCATTTTCCACCGCAGGCAAAGACGATTCCACCAGTTTTGACGCCGACACAAAAGAACAGTCGCCGATAATGACCGAACCGCAATGTTCCGTTCAAACTTTTAATGAGTTTCATCCGAGGAATTGTCCCGCCGATAACGTTTTAAAATCGATTGACGGAGAATCTTCAGCGCAACATCACAGTGAAGGTCCTCAAAAGAATTTTGTGGAACTAGAAACGATGCGACCGGTCAACGTTATAGCGTTCGGCAGCTTGCTCAATTCTTCCCCCGCTCCTGACATCGGCGCGACCTCCGGCTTCACGGACGCGTCACAGAAACTGTCGATCGAATCGGACGGCCTCCTCAAAGAGAAGCAAACGCTGGCCCATCTGATCCAAGATTCCTACATCAATGAAAATTCCTACGCCGAATACTTTTCGTCGGACAAAGAGTTCGCCGGGGCCGTTCCCGGGAACGTCCTGCCTGGGAACGTTGTACAGAAGATGGAGCTCTGCATCATCGACGATGACGTTCCGAAAGACTCGGAGTACATCTGGGACGAAACGCCGCAGAAAGAAGAGTTCGCTTTTTCGAATTTCATGCAGTGCAATTACGCTCAAGGTATTTACGTGGATAGCAAAGACACGAAAGGTTCGACGAGTCAGACTCCGCAGTTCTCGGCTGGAGACATGTGTGAAGACGACCACAATGACTACGCGGAGTTGATATGCCCGCGGGACAGTTACTTGGAGCCCGAGGAGCATAAAGGCTCTTTCCTGGAGGCTATGGGATCCTCGCGCCCCGGTCCCGGCCCTGATGTGGCGGCCCTCAACATCCGCACGGACGAGCGCATGCCGCCTCGGGGGGAGCTGTCGGAGCAAGAAAGCAGCGGCGATGTAGACGCTCCCTGGGGAGggATGTACCGAGATGTGGGCATGGTCGGGGGCTCCACCTCTTATGATCTGCTGGCGAGGGAAACCTGGGCTTCTGATGCCTCCGACGTGGACGCCCCCGCTGTACCACCCAAGCACGCCTTCAGTGAAGTTGAGGACATGCCCATCGTGGTGGCCGTTAAACCCCCTGACCGCAACTACAAATGTGCCACGTGCGGGAAAAGCTTCAACTGCCCCAAGGAGCGTCGGGTGCATCGCACCAAGGAACATCCCGTGAACGGTCCCCCGCCCCTCCCTGGGCAGCCCCGCAAGCCTCCGGTCAAGAGACGTCGGGGGATGCCTGtcaacatcaaaattaaaaatgagaaaatactCAAAACGGAAGGACTCCTCTCGAAGATGATCGAAGGCGACACACCGGACATCCAAGATCCGAGCATCGTCAATATAAAGATCGTTCAGGACGAGCTGCGAGAAGAAATTGAAGGAACCGAGAAGAAGCCCGATCTGGTGATCGTTAAGGAAGAGGTAAAGAAGAAGAGGAAAGACTACTGCTGTGTGACTTGCAAGAAGGACTTCTGTTCGGACAGCTCATTTAACGAGCACCTAAAGATCCACCCGCTCGAGTGCTTAACGTGTGGCAAGTTCTTCAACAGAAGAGCGAACTTGCAATTGCACATCAAGCGGCATCTCGGTATTAAGAACTACAGATGTGACATTTGTGAGAAACGCTTCATCACCAAGCAGAAGATGGTGGAACACTACAACGTCCACACGGGCTCGGCGCCCATCAAGTGCAGCTTGTGTGACGAGACATTCCGCCGCCACTCCAACATGGTCCAGCATCGCAACCGCCATCACTTCCACCTCAAGCGGCGGCTCCGAGACTACGTCTGTCACTGCGGCGAAGTCTTCCATTCCAAAAAGAAACTGGCCTGGCACCGAGAGATCCACGACGACCGGCCCAAGGCTTGCCTGCACTGCAGCGAGAAATTCATCCACGTGGCATCGCTCACCCGGCACATGCGGCGCGCTCACAACAACTACTACGTTCCTGACGAAAAAAGAAAAAGAGAAAACGTCCAGTGCCCCATCTGCAGCCACGTCTATCTGAAGACATCCATAGACATGCACCTGCGAACCCACACCGGAAAAAAACCTTATTCGTGCGTAATCTGCAATAAAAACTTTACTACAAAGTGGAACTTGAAGCTTCACCGGTGGACGCACGCAAACAGATCCAGTAAACCTTTCAAATGCGCCATGTGCAAGGGCGCGTTCATCCGCCACGCGGACTACATATCCCACATGAACGCCCACAAGTCCGTGCGGCCCTACACGTGCAACTACTGCGGCTGTCAGTTCATCAGGAAGTACAATTGTCAGCGCCATGTGAAGGAACACGAGAACTCCAAAAAGTATGTTTGCCAAGTTCCCGAGTGCGGGAAGACATTCCATCGCAGCTATTACCTCTCGGAGCACATGAGGGTCCACTCGGGCGCGCGGCCGTTCTCCTGCAACATCTGCGGGAAAACGTCCAGCACCAAGTCTAACCACAACAAGCACGTGAAGATTCACCACGCCCGGGAGCCGGTCACCACCGAGGGCTAG
Protein Sequence
MERQVQCPVCTLYLHEGMFLQAHLDTHPKDQVIQALCSLAKSGKSSSHYGSRGSTPYASERSYRSRSRTPATCDSRHYHHRPPRSSRPPSRSRSPTDYRPSIKSNSSSETSPSNKNDSFQSSRHGHEPMRIVNTPLQSDSGYADKTDSVFGDIADKPHHQTKHPRERPASVTSPGYARPGDVFIKEPDSETRTSFAQPCPYPNKAAYKDETSKRNDGIPMLKRLPLKNQDGISIDCVNPGAQPYSPNSHKNMLISSALPGPSSGKNFLFANQFAPISSASPSRTFTRHGDAVYIKDPASGDSETMVAFVQPMMAAQSASCAYSNRTDFKDDVKKIDPAPVLKRLQYINSDVKLSSDSIHIVNSHLRPDNFVEKSDVAFKAGDSSQQQVPHQSSSKHMKDRADASTPTRNFTRHGDLVFIKDTASGDAKTAGFVQPKMTVMQPTSCAYPNKTMTKDRECSVDISTVNDNLPMLKRLPYVNPEGITLDRMIPASQPYVQSSHNNIVISSSLPGPGSGHGGKSILGSLFSNQFAPISTASFQRNATVTNQNSPIFYQEIREVGGKQVLSAVPVSGNREEAAAQAGNVHQNVMLYNQYSGSSACVYPQQSAGSNVNQCYSDVTLSAQSLQTACNNFSNKLPMNVDGHSMLNIYADISQNLHTETRHSDNSINDKSVDSNLTDLIEIMPDRSNGEVNDNASTKSSGVKILSNIKVEIPMSNNNMIPEIIDLTLAHDLQRKKMLPEIAEPNLNEDEAILPDYADEELSGSYSPGRFSNRDDYSGSRSVISSSPLDGSVAGLPVPVEITSSKSGLQPGAIVNTFSVIKNIGNPNLYKDSVASSSQNPDCDEKASEQEQILPDLTCNEKPSISPCSDLTNDSNEEPYERLCAVPQSSNHPDKPSGNVSRFPLSMVTRSVARKNLFIKKPRKILAIKNSKSNVKHVDKASSSSSVSNLKTSTPKIVPSKKDDRRPETSLTGTGRLDVFFKEIDKFKKGSELTIVPSGLSDKSALQLECRSFSTAGKDDSTSFDADTKEQSPIMTEPQCSVQTFNEFHPRNCPADNVLKSIDGESSAQHHSEGPQKNFVELETMRPVNVIAFGSLLNSSPAPDIGATSGFTDASQKLSIESDGLLKEKQTLAHLIQDSYINENSYAEYFSSDKEFAGAVPGNVLPGNVVQKMELCIIDDDVPKDSEYIWDETPQKEEFAFSNFMQCNYAQGIYVDSKDTKGSTSQTPQFSAGDMCEDDHNDYAELICPRDSYLEPEEHKGSFLEAMGSSRPGPGPDVAALNIRTDERMPPRGELSEQESSGDVDAPWGGMYRDVGMVGGSTSYDLLARETWASDASDVDAPAVPPKHAFSEVEDMPIVVAVKPPDRNYKCATCGKSFNCPKERRVHRTKEHPVNGPPPLPGQPRKPPVKRRRGMPVNIKIKNEKILKTEGLLSKMIEGDTPDIQDPSIVNIKIVQDELREEIEGTEKKPDLVIVKEEVKKKRKDYCCVTCKKDFCSDSSFNEHLKIHPLECLTCGKFFNRRANLQLHIKRHLGIKNYRCDICEKRFITKQKMVEHYNVHTGSAPIKCSLCDETFRRHSNMVQHRNRHHFHLKRRLRDYVCHCGEVFHSKKKLAWHREIHDDRPKACLHCSEKFIHVASLTRHMRRAHNNYYVPDEKRKRENVQCPICSHVYLKTSIDMHLRTHTGKKPYSCVICNKNFTTKWNLKLHRWTHANRSSKPFKCAMCKGAFIRHADYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVKEHENSKKYVCQVPECGKTFHRSYYLSEHMRVHSGARPFSCNICGKTSSTKSNHNKHVKIHHAREPVTTEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-