Basic Information

Insect: Glossosoma conforme
Gene Symbol: zfh1
Assembly: GCA_003347265.1
Location: PZYU01050196.1:15343-18510[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0051 0.63 11.9 1.6 3 23 159 179 158 179 0.97

2 16 4.9 6.1e+02 2.5 2.8 2 23 186 207 185 207 0.95

3 16 0.03 3.8 9.4 1.1 1 23 213 235 213 235 0.96

4 16 0.0081 1 11.2 2.8 1 23 293 315 293 315 0.98

5 16 0.0032 0.4 12.5 2.6 3 23 324 344 322 344 0.96

6 16 0.53 65 5.5 0.7 3 23 350 372 349 372 0.90

7 16 0.35 43 6.1 1.0 1 23 379 401 379 401 0.97

8 16 0.0067 0.83 11.5 1.8 1 23 411 433 411 433 0.96

9 16 9e-05 0.011 17.4 2.1 1 23 439 461 439 461 0.96

10 16 4.7e-05 0.0059 18.3 0.6 1 23 466 488 466 488 0.99

11 16 0.12 15 7.5 0.4 2 21 495 514 494 515 0.93

12 16 0.041 5.1 9.0 4.9 1 23 522 544 522 544 0.97

13 16 0.00067 0.083 14.7 0.4 1 23 550 572 550 572 0.98

14 16 0.00042 0.052 15.3 1.0 3 23 580 600 578 600 0.98

15 16 0.004 0.5 12.2 8.0 1 23 606 628 606 628 0.98

16 16 0.0024 0.29 12.9 2.5 1 23 633 656 633 656 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0051	0.63	11.9	1.6	3	23	159	179	158	179	0.97
2	16	4.9	6.1e+02	2.5	2.8	2	23	186	207	185	207	0.95
3	16	0.03	3.8	9.4	1.1	1	23	213	235	213	235	0.96
4	16	0.0081	1	11.2	2.8	1	23	293	315	293	315	0.98
5	16	0.0032	0.4	12.5	2.6	3	23	324	344	322	344	0.96
6	16	0.53	65	5.5	0.7	3	23	350	372	349	372	0.90
7	16	0.35	43	6.1	1.0	1	23	379	401	379	401	0.97
8	16	0.0067	0.83	11.5	1.8	1	23	411	433	411	433	0.96
9	16	9e-05	0.011	17.4	2.1	1	23	439	461	439	461	0.96
10	16	4.7e-05	0.0059	18.3	0.6	1	23	466	488	466	488	0.99
11	16	0.12	15	7.5	0.4	2	21	495	514	494	515	0.93
12	16	0.041	5.1	9.0	4.9	1	23	522	544	522	544	0.97
13	16	0.00067	0.083	14.7	0.4	1	23	550	572	550	572	0.98
14	16	0.00042	0.052	15.3	1.0	3	23	580	600	578	600	0.98
15	16	0.004	0.5	12.2	8.0	1	23	606	628	606	628	0.98
16	16	0.0024	0.29	12.9	2.5	1	23	633	656	633	656	0.96

Sequence Information

Coding Sequence: ATGgacataaaaatagagatggAGTGGTCGACAGACCTAGATAGCTTCACTGTCCACGACGAACCTCTATTACAGGAGAATGATGATATGGAACGGTGCAGTGATATCATTCAAGCAGCCATCGATGAAGAGAGAAATCAAGAAAACAGCCAACAAACAAGCGAAAGTAAAGCCATTAAAGACAGCGAGGATCTGTTGGAGGTTATCAGAGAAGAAATATACACTACAATTGACAGTCGCGTGAATAACGAAGAGAttagaaatgttaaaaatgagAGAAATATGATTGAAAGTATCGACGAAGAAGATAAACCTGAAGAAGATTTTACTTTTTACGTCGACGACTGCGATGACGATGACGTGGTGTTCGTGGAAGATCCGACAGAAGACGACATTCCaactaaaaaaaaggttttcattaTAGGCAACGATCCAAAAATGGTGGGTTGCAATCAAAAAAAGATGGAAGAATGCTGCACGGAATGCGATTTTAAAACCGATTCGTTGGGTGCATTGAGGAAACACATGTCGGTCCACGACGAAGGAAACATGTTGTCTTGTAATCTGTGCAGCTTCACTTGTTCCAAATCTATTATACTTTTGATACATAAGAGAAAACACAGAACGAACCAATGGTTTGCGTGTGAAACTTGTCCGTACATGACTCGCTTGGAAGATCAGTTCAAGAAGCACACGACGTCGCACGAGATTGCGAAATCCACAAAAGAAGACGGATCTCTTTCGGTAGATTGTAAGCTGTTGGACGTTAAAGTGGAACTGCATGATTTTATGAAGTACAGCAAAGCTTGTGATACCGATGATTTAAGCGTCAATACAGACGATAAGGAGATGTTTTTAGAAATGCATCGAGAGCCTTACGAATGCGATCTTTGCGATTTTACTTGCATGTCGTCTCACGAATTGATGATGCATCGATTGGTCCACGACGATAACGAGCAGTATCTCGCTTGTAACCAATGCGACTTTTTTTGCAACGATTCGTCCATGCTGAAAAAACACAAACTCGTTCACGCCGGAATGAAATTTTGCGACGTGCCGAACTGCGGTTTTAAAACGGGAACGAGCTACCGTTTGGCGAGACATAAGAAGCAGCACGAGCAAAAAGGAAAGCCTTACGAGTGTCCGTCTTGCGATTTCGTCTGCGAAGAAGTGCAAAAAATGATCAAGCATAAGAAAATACATCAGCTGCCTGGCTCGGTTAAAAAGAAACACGCGTGCGAAGAGTGCACTTACAGTACGAATTATATACGGGATTTTAATAGGCATTTACGGGTGCATTCCGGTGAAAGACCGCACGTCTGCATGCAGTGCGGGCACTCTTTCTCCGAGCCGACCGGATTGAAACGACACATGGTGCGTCACACTAAAAAGAAGTACGAGTGCGACCAATGCGGTGTCAAATTCAATAAGAATATTCTATTGATACAACACAAGCGGACGCATTTGGAGAGCAAATCGGTGCAGTGCAGACAGTGTTCGTATCAAACTGTGCACCCTAAAGAGCTGGAAAGGCACGAGAAGTTGTACAGCGATAGAACGCCGTTCAATTGTGATTTGTGCAGCTATCAGAGTTGTGACCGGAGTCATCTTTTGAGACATAAACTGGTGCACACTTCTCTAGAAGTCTTTGAGTGCGACGAATGCAATTACGAGACGGATAAGCTGGTTAATTTGCAGAATCATAAACGAGTTCACGGCGCAGAGAAGCGTTACGGATGTAACGAGTGCTACTACAGGACTTCTTATCCTAAAGACATGCGAAGGCACATGCGGATGCACAGCGGTGTGAAGCCGCATCAGTGTGACTTGTGTGACTATTCTTGCTCCGAAAGAACGCACTTGCGAAGGCACAAGAAGATACACGAAGTCAAAATGCACGACTGTCCCAAGTGCAAAAATTCATACAACTCGCTCGTGAGATTGAAGACGCATATGAAAACTGTCCATTGCATTTATTCTGAAAGCGAGGCGAGCCGTGGAAGCGCCAGCAGCGA
Protein Sequence: MDIKIEMEWSTDLDSFTVHDEPLLQENDDMERCSDIIQAAIDEERNQENSQQTSESKAIKDSEDLLEVIREEIYTTIDSRVNNEEIRNVKNERNMIESIDEEDKPEEDFTFYVDDCDDDDVVFVEDPTEDDIPTKKKVFIIGNDPKMVGCNQKKMEECCTECDFKTDSLGALRKHMSVHDEGNMLSCNLCSFTCSKSIILLIHKRKHRTNQWFACETCPYMTRLEDQFKKHTTSHEIAKSTKEDGSLSVDCKLLDVKVELHDFMKYSKACDTDDLSVNTDDKEMFLEMHREPYECDLCDFTCMSSHELMMHRLVHDDNEQYLACNQCDFFCNDSSMLKKHKLVHAGMKFCDVPNCGFKTGTSYRLARHKKQHEQKGKPYECPSCDFVCEEVQKMIKHKKIHQLPGSVKKKHACEECTYSTNYIRDFNRHLRVHSGERPHVCMQCGHSFSEPTGLKRHMVRHTKKKYECDQCGVKFNKNILLIQHKRTHLESKSVQCRQCSYQTVHPKELERHEKLYSDRTPFNCDLCSYQSCDRSHLLRHKLVHTSLEVFECDECNYETDKLVNLQNHKRVHGAEKRYGCNECYYRTSYPKDMRRHMRMHSGVKPHQCDLCDYSCSERTHLRRHKKIHEVKMHDCPKCKNSYNSLVRLKTHMKTVHCIYSESEASRGSASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -