Gcon034743.1
Basic Information
- Insect
- Glossosoma conforme
- Gene Symbol
- ZNF526
- Assembly
- GCA_003347265.1
- Location
- PZYU01066538.1:1694-3531[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00039 0.048 15.4 0.7 1 22 100 121 100 122 0.91 2 12 0.32 40 6.2 4.9 1 22 189 210 189 214 0.93 3 12 0.46 57 5.7 0.1 2 19 225 242 224 244 0.90 4 12 0.00019 0.023 16.4 1.7 2 23 280 301 279 301 0.97 5 12 4.4e-07 5.4e-05 24.7 0.6 1 23 307 329 307 329 0.95 6 12 0.26 32 6.5 1.0 3 23 369 391 368 391 0.94 7 12 0.00012 0.015 17.0 1.0 1 23 397 419 397 419 0.97 8 12 4.9e-06 0.00061 21.4 0.6 1 23 423 445 423 445 0.99 9 12 0.0035 0.43 12.4 0.3 2 23 452 474 451 474 0.95 10 12 1.5e-05 0.0018 19.9 5.5 1 23 480 502 480 502 0.99 11 12 6.3 7.8e+02 2.1 0.1 1 20 508 527 508 531 0.86 12 12 0.19 24 6.9 0.1 3 20 534 551 533 555 0.93
Sequence Information
- Coding Sequence
- atggtaaTAAGACATCTCACTCCCAGATGTTGGGATATTGAAACAAACGAAAACAAACCTTTTCTAGTGACTGCAGATACGGATGAGCAAGTGAATCGATCCGACAACTTCAATTCCGGTATTGAACCTGCAGTCGATGGCCCTTTACTCGTATCGGCAAACAACTTTCCTGACCCTACAGACTATAGTGCTGATGACACGACTGGACTCAGGAATATTTCCAAAGCGGCGGATCACCAGGACAATTCAATAACTGATGAATCGGGCGGGATAAATAATCTGAATAGCTTCACTTTATATATGTGCGAATTTTGCGATAAAGTTTTCGGGAATAAAGTCGATTTTGAAAAGCATAATGGTAATCATGTGAACGGTGAACTATCCTTTGAGAGCGAGCAGAGTTTGATTTACGATACAACAGTGGTGGAAGTGAACTCTTCCCTGGACATTCAACAGGGCGCTTGCGATTTGCGGAATCTTGGGATAAATTCTTTAGAAGAAATAAATGCAAACAACCATTCATTCGAACAGGACGACCCCCGTGCTAGAGATGGGATCGCCACTTACAAATGTGACTACTGTTCGCTGAAATTTGAGTCAGATTTAATGTTACAGAATCATCACTGTACTTTTAATTCGCATGCAGCTCTCTGTCGACGAAGTGGTAGTCTAATTTGTGAATTTTGTGGGGAGATATTTGAAACTGAAGAGATTCTCAACAGACACTCTCATTGTTGCTCAATGAACGATGATATTCAGTCAAAATTTGACTCTAAAGCTACAGAAATAATAACCGGGGAGGTCGAAatctataaaaatttaaaggtcGCAAGCCTAACTTGttcagtttgtaaaaaaatactcatcagCCATTCGTCACTGCGCAGTCACATGAAGATTCACTCGGATATGACGCCCCATACCTGCGAAATCTGTGACCGACCTTTCAGGAGAAAATCAAATTTGGAAGCTCACCTGGTGCTCCACGTCAAAGATTTTCCATGTCACGTCTGCTGCGGCAGTCTTATTTCTCAATTTGCTCTGGACCGTCACGCCAGCGGCCACACTTCGGAGGAACTGAGCAAACCCGCGGCTTTCGTGAACTGTCCACATCCTAACTGCGCCGCCACCTTTCCATCAAAATTTAAACTCTACTACCACAAAAGAATACACGAAAGAGACACCGGGTACGACTGCTTTATTTGTGGaaaactttttatgaaaaaaaaaagcttagaGAATCATATTGAAAAGCACAGCTATAATTACAAGTGTGGTGCATGCGATAAGAGCTACTCGACTGCGTCGTCACTGAAGGAACATTCGCGTATGCATTCCAATGAGAAGACTTTGTCCTGCCAAGATTGTGGGGAGCGTTTTCGGTGGAGGAGCAAGTTGGTGCTGCATCGGGCAACGGTGCACCAAGCAGCTAGAGACTATACGTGTCACCGCTGCCGGCGCCGCTTCACTCGGCCTAACTACCTGCGTGAGCACTTGCGCACGCACACTCAAGAGAGACCATTTGCTTGCGTTCACTGCCCATACCTGGCGGGGCAAGCATCCGTGCTGCGGCGCCACGAGGGCGCGCGCCACCGGGCCTGTCCGCACTGCTCCCAAGTGGTGGGTGATCGCATGCAGCTGCAGGTGCACGTATGGAAGCAGCATCCCTTGCTGGCCCCGGAGGAGAATGCTGTGATAGCCTAA
- Protein Sequence
- MVIRHLTPRCWDIETNENKPFLVTADTDEQVNRSDNFNSGIEPAVDGPLLVSANNFPDPTDYSADDTTGLRNISKAADHQDNSITDESGGINNLNSFTLYMCEFCDKVFGNKVDFEKHNGNHVNGELSFESEQSLIYDTTVVEVNSSLDIQQGACDLRNLGINSLEEINANNHSFEQDDPRARDGIATYKCDYCSLKFESDLMLQNHHCTFNSHAALCRRSGSLICEFCGEIFETEEILNRHSHCCSMNDDIQSKFDSKATEIITGEVEIYKNLKVASLTCSVCKKILISHSSLRSHMKIHSDMTPHTCEICDRPFRRKSNLEAHLVLHVKDFPCHVCCGSLISQFALDRHASGHTSEELSKPAAFVNCPHPNCAATFPSKFKLYYHKRIHERDTGYDCFICGKLFMKKKSLENHIEKHSYNYKCGACDKSYSTASSLKEHSRMHSNEKTLSCQDCGERFRWRSKLVLHRATVHQAARDYTCHRCRRRFTRPNYLREHLRTHTQERPFACVHCPYLAGQASVLRRHEGARHRACPHCSQVVGDRMQLQVHVWKQHPLLAPEENAVIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -