Basic Information

Insect: Glossosoma conforme
Gene Symbol: -
Assembly: GCA_003347265.1
Location: PZYU01006259.1:18909-23699[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.033 4.1 9.3 1.0 3 23 48 69 47 69 0.92

2 24 1.4 1.7e+02 4.2 2.2 2 21 432 451 431 452 0.92

3 24 1.7 2.1e+02 3.9 0.2 1 21 460 480 460 481 0.96

4 24 5.2 6.5e+02 2.4 0.3 1 22 537 558 537 560 0.82

5 24 0.022 2.8 9.9 2.2 3 21 571 589 570 590 0.96

6 24 0.097 12 7.9 0.2 3 19 599 615 597 616 0.95

7 24 0.00061 0.076 14.8 3.8 3 23 643 664 641 664 0.96

8 24 0.29 36 6.3 1.9 1 23 670 693 670 693 0.92

9 24 0.12 15 7.6 0.3 1 23 717 740 717 741 0.96

10 24 0.016 1.9 10.3 0.6 1 23 745 767 745 767 0.97

11 24 0.014 1.7 10.5 1.0 1 23 773 796 773 796 0.96

12 24 0.00042 0.052 15.3 1.1 1 23 810 832 810 832 0.97

13 24 0.0028 0.35 12.7 1.7 1 23 881 904 881 904 0.97

14 24 7.3e-05 0.0091 17.7 0.9 1 23 969 992 969 992 0.98

15 24 0.0023 0.28 13.0 1.4 2 23 1012 1034 1011 1034 0.95

16 24 0.041 5.1 9.0 0.1 2 23 1040 1062 1039 1062 0.93

17 24 0.16 20 7.2 0.1 1 21 1107 1127 1107 1128 0.92

18 24 0.00017 0.022 16.5 0.3 1 23 1137 1159 1137 1159 0.94

19 24 0.038 4.6 9.2 0.1 3 23 1259 1280 1258 1280 0.87

20 24 3.2e-07 3.9e-05 25.1 1.5 3 23 1287 1307 1286 1307 0.98

21 24 0.024 3 9.8 4.1 1 23 1333 1355 1333 1356 0.91

22 24 7.5 9.3e+02 1.9 0.6 3 20 1388 1405 1387 1406 0.91

23 24 0.023 2.9 9.8 1.8 1 23 1407 1430 1407 1430 0.96

24 24 0.0002 0.025 16.3 0.5 1 23 1438 1461 1438 1461 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.033	4.1	9.3	1.0	3	23	48	69	47	69	0.92
2	24	1.4	1.7e+02	4.2	2.2	2	21	432	451	431	452	0.92
3	24	1.7	2.1e+02	3.9	0.2	1	21	460	480	460	481	0.96
4	24	5.2	6.5e+02	2.4	0.3	1	22	537	558	537	560	0.82
5	24	0.022	2.8	9.9	2.2	3	21	571	589	570	590	0.96
6	24	0.097	12	7.9	0.2	3	19	599	615	597	616	0.95
7	24	0.00061	0.076	14.8	3.8	3	23	643	664	641	664	0.96
8	24	0.29	36	6.3	1.9	1	23	670	693	670	693	0.92
9	24	0.12	15	7.6	0.3	1	23	717	740	717	741	0.96
10	24	0.016	1.9	10.3	0.6	1	23	745	767	745	767	0.97
11	24	0.014	1.7	10.5	1.0	1	23	773	796	773	796	0.96
12	24	0.00042	0.052	15.3	1.1	1	23	810	832	810	832	0.97
13	24	0.0028	0.35	12.7	1.7	1	23	881	904	881	904	0.97
14	24	7.3e-05	0.0091	17.7	0.9	1	23	969	992	969	992	0.98
15	24	0.0023	0.28	13.0	1.4	2	23	1012	1034	1011	1034	0.95
16	24	0.041	5.1	9.0	0.1	2	23	1040	1062	1039	1062	0.93
17	24	0.16	20	7.2	0.1	1	21	1107	1127	1107	1128	0.92
18	24	0.00017	0.022	16.5	0.3	1	23	1137	1159	1137	1159	0.94
19	24	0.038	4.6	9.2	0.1	3	23	1259	1280	1258	1280	0.87
20	24	3.2e-07	3.9e-05	25.1	1.5	3	23	1287	1307	1286	1307	0.98
21	24	0.024	3	9.8	4.1	1	23	1333	1355	1333	1356	0.91
22	24	7.5	9.3e+02	1.9	0.6	3	20	1388	1405	1387	1406	0.91
23	24	0.023	2.9	9.8	1.8	1	23	1407	1430	1407	1430	0.96
24	24	0.0002	0.025	16.3	0.5	1	23	1438	1461	1438	1461	0.93

Sequence Information

Coding Sequence: ATGCATTACAGTGATTATGAAGAACACGAAGAGGAAGAGTTGACAGTGGATGAAGTGCTTGCGCTGGCAGCGGCCGCCGAGACTTCGTCAGAGAAGGCGCCGGTGGGCCCCGTGCACGTTACGCAGCTGGCCTCCAAGGACTGCCTGGTGTGCGGCCGCGCCTACCGCTACTCCCACAACGCTCGCCGCCACGAGCTCAACACCCACGGCTATGATCGCTACACCAACAAGGTCAAGCCGGTGGATCCCCCTCCAAAACTCCGACTCAACCCCTACAATCCCAAAGTTCAATATATACCCGATCCCTCTCCCATTAAATCCAAGTCCAAGCCTAATTCCAACCACAGGAACACCCTTACAAAGTCTCATCCCTTCCCTGTTAGAATTCGGCCGCTGATGGACATGAGAGATGGACGCGAACCGGAAATATTGAAATCGCTGCTCACCGCCCGGCCGGAAATGTTGGTCTCGGAACCGGAAATAATGCAATCGAGACCGGAAAGTCCGGAAGCTCTCATATCGGAACCGGAAATCAATTCATTCCAAGTTGAAAATATCGTCACCGAACCGGATACgtatgataataattctgacGGATCCGATGACGAAAATAATTTACGCGAGCAACCGAGATCGAGGTCGGGCGATTCCGATTGTGAAGTGGAGCTCGGCGCTCACTTGGACATTAACAAGATTATAGGCGTCGACGTGAACGGACCCTGCGACGAACAAGACAAGTACGATCACAGCGAAGTTACCGTGGATGCCGATCATGAAGTGGAAGACGAGGAAGCCGTTTCTGATAATAGCGATGAAGGCAATGCAGAAGAAGACATAGAGGATGAAAATGCTGAAGACGAGGAAGAAATGGAAAACGATGATAGAAATGAAACGGTCGAAGATGATAATTCCGACAGCGAAGTCGGACACGGTTTGGTTATCGAGGAAGACACTATAGATGGAGATCACGTGGACGTAATTGAAACTGTGAACCCTGAAGATGAAGTGGCCGATGCGAGCGTGCGCCGCGATAGTGAGGAAGGCGCTCAGTACTCTGACGCAGAAGAAGACGATGACATTCCTCCGGTTTCTTTGATGCCCATCGTTGAACTAAATGAACCGGATGCTGAAACTCCTGTCGACGATCCGGAGAGTGTAGAAAACGTATCGCAACTATTAAACGAATCTGTCGACATTAAAGGCATAGAACTCGGGGTGCCCGGGACAATCACTCCGGCGCAGAAAGCTTTCATAACAAAGTACAGAGATGTGATCGAGCAGATTAACACCATGAGGTGCCACTGTTGCGACCGATCGTATCCGAGAAGGAAAGCCGTCATTCAGCATTTACAAAAGAGCGGAATGAAAATTCCAAAACACACTTGCTACAACTGCGTGGTCACTTACGGGCACATCGGGGCCCTGCTGAGCCACATGAGAGCGCAGAACTGCACCAACGCTTGGAGGCTGATCTACGAGGAAGGCGGCATCCCCGACAGTATGGTGCGAGAGGCCACGGTCGTGGAGGAGTATGCCGATGACGGCtcattgattaaaaatgatCTTCTCAATAAATCTCAATACAAGGATATCCTGAATGCCCGCTCGTACGCCTGCAAGCTGTGCCCGGCTAAATTCCAACTGAAGCAGTTCATAATGAAACATGTCCTCGACGTACATGAAAACGGTGGCCAAAGAATTCCTCTTTTGTGTTCTCATTGCAAGTATCGTTTTAAGGATAACAAAGTTTGGAAAAAGCACATCAGAAACGGTGAGTGCACAGTGAACATCGCTTGCGACCTGTGCCCGGAGAAGTTCAGGTCTCTCCAGCACTTCACGGACCACGCCTGGGCGGTGCACGCCGGGGGAGTGGCCGACCAGGGCGGAGAAGTCCTCAGCCGCGCAGTGGACGGGCGCCCGACAGACTGCCCGCTGTGCCACAAAACTACCACCACGTACCATAACTTGGTGAAACACTTGAAAAGCGTTCACAATGAAGAGAAGCCGCACATGTGTCAGCACTGCGATGCCAAGTACGCGATGGTCACCGAGCTGAACCAGCACATCTACCAGCAGCACTCGGATCGCGGGCCCGGCGGGGAGCAGCCGGACCTGAGCATTGTCAAGCAAGAAGTGACCACTTACAACTACTCTTGCACGGAATGCTCTTCGATGTTCGACACGGTGGACGGCTGGACCGAGCATCAGATATCTGCTCATCATCATGAAGCGTTCGAGTGCGATCGGTGCGATAAAAAATTCTTGCAAGATTCAGAGCTCGCGGATCATAAGAATTCTCATCTCAGAATCAAGTATTATTCTTGTACCTTGTGCTCCAACTCGTACAATTCCAATCAGAGTCTTTCGGAGCACATGGTCAAGAGTCATCAAGGGGAGACTCTGCTGGACGCTTCGGAGGAGAACCCCTTCTTCTGCGAGGTCTGCCTGAGAGCCTTCAAGAGCCGGCAAGCCTTCTCCAATCACATGCGCATACACTCAAAGGTACCTACCACTAATCGGAGATCTGGCGAACCGAAACCCGTCATCGAGATTAAGAGGGCGCCCCTCGAAAGAGTACAAATACAACCCGTCTCTTATCATAATTACAAAAAGAATTCCAAATCAATTTCGGGGGCTCCCTATTCATGCGATATCTGCGGGAAAGGATTTTtgcacaagaaaaatatttggaaacacAAGAAGATCTTACATTCAGATGTCGTCAGCAATGATTCCACTCTGAGCACCGGTTTTGCGGCTTCCACGGAGGAAGAGGAGGAGTACGGAAATGAAGATTTTGGAATGGGGATTTCCATTCCCCAATTTGATAGTTTCACAAATACCAACTTCATGGAACAGCCCACCATATCGGAGCCCACCAGCGGCTCAGAGCTCGGCCTGCTGTACCAGTGTGATCTGTGCGACAAGAAGTTTGCAGTGAAGAGCAGCATCTGGAAACACAAGCGAGTCAAACACGGAATCATCAATCCCAATTTACaagaagaaattttaaaatctgAGCCCAGCAGGACCAGTTGCACCATTTGTAACATCCAGTTTACTGATAAGAAGGCATATTACCGCCATCGAAAAAATGTGCACACCGTGTCCGTCCAGGTCTGCAAAATATGTGGAAAATCATTAAATTCTACACTCGGCCTGTATGAACATTTGAAAGCCGCTCACGCTAAAGAACTGTTGGGTTACAATGAAGGGCAAGGGAAAGTGCAGAACGACGAGCCACAGCCCAAAATTCCTACCGGCGATGAGGAAGTTAACCAGAGTTTAAGTCAACCTGCCGAGCAATTCCAGGCCAAGTATCCTTGCGACGCCTGTGGGAAAAACTTCATCGGAATGATGGCACTGCAGAATCATAAATGCATTCAGCCAAACCCCAACTCTGACAGATACGATTGTGAGATTTGTAACAAGAGCTACACTTCAATATCAGCCTTGAAGAGTCACCGGGGGTGGCACCTGCGATCACCTGACGGCAAAGCGGCTTTCAGTAACTCCGGGCTGTGGATGCCGCAGCACCGAGTCACCAGCAAGGTCAGTAAACACGAACTGCCTGAAATGGCGTCTCGCTCCAAACAGCCTTCATATGCCGACATTCCTCCTTTGCAAATTAAGCGAAGGTTCCCTCCGGACATTCAGGTCACCTTGCTGAAAAAGAGAAAACTGACAGACGAGGTGACTCTGGAGCTGGTAAAAGCTGCCCCCAAGCCCTCGCCGCCGCGGTTCAGCAACTCCGTGAGCGGGGAAGATCGCTTCTGCGAGCCGTGCGGGAAAGCTTTCACCAAGAAGGCGGCCTACTTGAGACATGTGGACGAAGTACACCGACCCAATTCGGTATTCTGCCCTATTTGCAACAAGAGCTTTACCAGGAAGTCGACCCTTCTAGTGCACATGCAGAAGCACGACACGGCGGACAGCTCGGAGCCCGTGGAGGCCGAGGATAGCGAGCCCGAGGGAGGCGACCGGGACCTGGGCGTGTACAGTTGCGATCTGTGTGATGTGCAGTACAGCACGCCCAAGTCCCTGCGCCGCCACTGCATCAAGCACCACAACGTGACCGAAGAGGACATGGTGGAGGAGGCCAGCATCGCGCTCACCGGCACCGGCACCAGGACCATCGAGGTGGGCGGCTCCAAGCGCAACTGCGGTCAGTGCAAGGAGGAGTTCAACAGCGACCAGGACATGTGGCAGCATCGACACTTCCAGTGCCAGCCCTGCGGCCTGTTCTTCCCGCGCCCACACCTGCTGGCCGTGCACTCGCGCAGCTGCCACGCGGACAAGGAGAAGCTCTTCTTCCCCTGCAGCATGTGCGACCGCTTCTACATGAACAAGAAGAGCCTCCAGCGGCACATCGAGGCGGCTCACTAG
Protein Sequence: MHYSDYEEHEEEELTVDEVLALAAAAETSSEKAPVGPVHVTQLASKDCLVCGRAYRYSHNARRHELNTHGYDRYTNKVKPVDPPPKLRLNPYNPKVQYIPDPSPIKSKSKPNSNHRNTLTKSHPFPVRIRPLMDMRDGREPEILKSLLTARPEMLVSEPEIMQSRPESPEALISEPEINSFQVENIVTEPDTYDNNSDGSDDENNLREQPRSRSGDSDCEVELGAHLDINKIIGVDVNGPCDEQDKYDHSEVTVDADHEVEDEEAVSDNSDEGNAEEDIEDENAEDEEEMENDDRNETVEDDNSDSEVGHGLVIEEDTIDGDHVDVIETVNPEDEVADASVRRDSEEGAQYSDAEEDDDIPPVSLMPIVELNEPDAETPVDDPESVENVSQLLNESVDIKGIELGVPGTITPAQKAFITKYRDVIEQINTMRCHCCDRSYPRRKAVIQHLQKSGMKIPKHTCYNCVVTYGHIGALLSHMRAQNCTNAWRLIYEEGGIPDSMVREATVVEEYADDGSLIKNDLLNKSQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHENGGQRIPLLCSHCKYRFKDNKVWKKHIRNGECTVNIACDLCPEKFRSLQHFTDHAWAVHAGGVADQGGEVLSRAVDGRPTDCPLCHKTTTTYHNLVKHLKSVHNEEKPHMCQHCDAKYAMVTELNQHIYQQHSDRGPGGEQPDLSIVKQEVTTYNYSCTECSSMFDTVDGWTEHQISAHHHEAFECDRCDKKFLQDSELADHKNSHLRIKYYSCTLCSNSYNSNQSLSEHMVKSHQGETLLDASEENPFFCEVCLRAFKSRQAFSNHMRIHSKVPTTNRRSGEPKPVIEIKRAPLERVQIQPVSYHNYKKNSKSISGAPYSCDICGKGFLHKKNIWKHKKILHSDVVSNDSTLSTGFAASTEEEEEYGNEDFGMGISIPQFDSFTNTNFMEQPTISEPTSGSELGLLYQCDLCDKKFAVKSSIWKHKRVKHGIINPNLQEEILKSEPSRTSCTICNIQFTDKKAYYRHRKNVHTVSVQVCKICGKSLNSTLGLYEHLKAAHAKELLGYNEGQGKVQNDEPQPKIPTGDEEVNQSLSQPAEQFQAKYPCDACGKNFIGMMALQNHKCIQPNPNSDRYDCEICNKSYTSISALKSHRGWHLRSPDGKAAFSNSGLWMPQHRVTSKVSKHELPEMASRSKQPSYADIPPLQIKRRFPPDIQVTLLKKRKLTDEVTLELVKAAPKPSPPRFSNSVSGEDRFCEPCGKAFTKKAAYLRHVDEVHRPNSVFCPICNKSFTRKSTLLVHMQKHDTADSSEPVEAEDSEPEGGDRDLGVYSCDLCDVQYSTPKSLRRHCIKHHNVTEEDMVEEASIALTGTGTRTIEVGGSKRNCGQCKEEFNSDQDMWQHRHFQCQPCGLFFPRPHLLAVHSRSCHADKEKLFFPCSMCDRFYMNKKSLQRHIEAAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -