Gcon037210.1
Basic Information
- Insect
- Glossosoma conforme
- Gene Symbol
- bab1
- Assembly
- GCA_003347265.1
- Location
- PZYU01001713.1:15193-16227[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.67 3.8e+03 -1.0 0.0 9 21 84 100 84 101 0.82 2 2 6.5e-09 3.7e-05 24.6 0.0 2 35 204 238 203 246 0.91
Sequence Information
- Coding Sequence
- ATGGACGCCGAGGAGGGTCCTCCTCAGTTCAGCCTGCGCTGGAACAACTACCAGACTAACCTGACGAGAGTCTTCGAGCAACACCTGCAGACGCAGAGCTTCGTGGACGTCACCCTCGCCTGCGACGGGAGGACCATCAAAGCCCACAAGATGGTCCTCGCCGCCTGCAGCCCTTACTTCCAAACACTCTTCTTTGAGAACCCCTGCGATCATCCCATCGTTATACTAGATCAGATACGATGGCCTGAACTAGAAGCTGTTGTAGAGTTCATGTATAGGGGAGAGATCAGCATACAACAAGATCAAATCAAACCTCTTTTGAAAGTAGCTGAGTTGCTGATGGTGAGAGGATTAGCTGATGTCGAAGGCGAGCTTGGAACTCTTAAAGCGCCTCCTGCAGCAGTTGCTCCACCACCTGTTGCTGCTCCCACTATACCTGCTGTAAGAAAAGAGTCTCCGGTTTGCTTGCCTAAGGTCAGAAAACGTAAGCACAGTCCTAAACAAGAAGCGCCTAAAATTGAAACTGTTAAGATTGAAGAAAAACAAACTAAGATACCGATTGTACATCACGATTACACAAGAAACATTGCTAAGTTGCCTTCGTGGGAGGAAGCGCAACTTCAAGGCGCTATTCGCGCAGTTGTCACTCAGAGGATGCGTTTCACGCAGGCTAGTACGAAGTTTGGCATTCCTAAAGGCACTCTGTACGACAATATTCTTGGTAAATCTAAAAGGATGCAGGTTCTTGATGAAGCAGGTCTAAGTGCTAATGAAGAGAGAGCCGTTTTGGAGTTCTGCTGCGATGTGGCCGCTTCGCCTTACAACAGACGCACGAAGCGAGCTCTACCTGCTGTTCTGGAGCATGTGACGCAGTTACGACGTGTGAGAGATCCAGCTTTTGGATTCAGCGGATTGGCAGGCTTCCGGTGGTGGTGGGCTTTCTGCAAGAAGCATTCGATCGTCTCTCTTTACTTTGATCGCAGCGATGGACCCCCTCAGCCTGGAGACGTGCACGAAGTGTCCGACGATACATGA
- Protein Sequence
- MDAEEGPPQFSLRWNNYQTNLTRVFEQHLQTQSFVDVTLACDGRTIKAHKMVLAACSPYFQTLFFENPCDHPIVILDQIRWPELEAVVEFMYRGEISIQQDQIKPLLKVAELLMVRGLADVEGELGTLKAPPAAVAPPPVAAPTIPAVRKESPVCLPKVRKRKHSPKQEAPKIETVKIEEKQTKIPIVHHDYTRNIAKLPSWEEAQLQGAIRAVVTQRMRFTQASTKFGIPKGTLYDNILGKSKRMQVLDEAGLSANEERAVLEFCCDVAASPYNRRTKRALPAVLEHVTQLRRVRDPAFGFSGLAGFRWWWAFCKKHSIVSLYFDRSDGPPQPGDVHEVSDDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00751282;
- 90% Identity
- iTF_00751282;
- 80% Identity
- iTF_00751282;