Gcon044847.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossosoma conforme
Gene Symbol
Jarid2
Assembly
GCA_003347265.1
Location
PZYU01033430.1:1-8898[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-19 4.9e-15 57.0 0.1 6 89 1203 1284 1199 1284 0.91

Sequence Information

Coding Sequence
TTTATTCCGTTTGGTGTACGTAAGCAGGCGTCACAATGTCCTGCTGGCAACACGAGTGCAAGGCTGGCGCTGCAAGCTCTGCGCAGCCAGTACAGCCGCGAGAGGCAGAACAAGCTGCGCTGCTTGGCCTTCCGCAACAGTGGGGATGCAGGGGAACAGCCCAAGAGGGTTCAAACGAGATCGTGCAAAGTTGTGAAAGCGACCAAGCCACTCAACGGTAAAACAAAGATGAATGGCGCTTCTTCCGAGTACAAGGTCATCAGAAGGCATAGAACTGTGGCACCGAGGACTGAAGCAAAGCTTTCCACTGCACCCACTCCCACTAGAGATAGAGGTCTAGCTCTAAGAAATCGACAATGCCCTAAGCCTGCACCTCAAAAGCCTGACAAGAAACTTATCAAAACCCCTTTAGATGTGAGAGTCGTCATTGAAAAGAAAGTCATTAAACTAGAATCACAAATAAATGTGTTGCGCAGTGTAACAGGAAGAAGACACATCACTCGGCAAAcaaatacaaacattacaaaatctaaaatatcaaataatagaaCTGACCGATTAGAAAATGTTCATTACACAAGAAAAGCCTTTAAAATTCCTCTTATTCGCAGGGACACAAGAGTGTTGACCAGTAATTCCGCCTTGAGCAAAACAAGATCAGGCaaactgagaaaaataaatgttattaatgtCAGAAGGAAAAATGTTCcaaataaaacaactaaattGGCAGAAACTACTAGTCATAAATCAAGTAAGGACGTTTCTGTAATTGCTGACTTTTCATCAGGAGATGACGAGCcactgtataaaaaaatctgctcTGTAAAACAAGTCAAGAAAATAACTCCTGATGTGAAGTCGGCTCAAGCAGAAAAAACATGCAGTCAGAACATGCTGCTTCAAACTCCGCGAATACACTTCACAAGAAATAATGGCAGAAATACTGATGTAGGGCAAGATAAAGCTTCTTCTGTATCATCTAAAGAATTGCCAGAGAGCCAAAATAAGCAGATAACGACTACCAAGACCCGGATCACACGTCATAATGCAACACAATTTAATCCAACCGACAGAAGTAAATCATCAATTATTCAATCTACTGTTCTAATAATCAATGAAtcttctaaattaaatatagtcAAAGATTATGATTCAAAAGTATATATTGAGggtaataattatactttaccACGGATCGAAATTGATAGTAAGGATATTGAAGTTGACTTTAATGCATTTGAAGCCAAATATGCAAAAAGCGTTGCTTCTATATTAGCGAATAGCGGCGGTGCACTGTTTGAAAAAAGCTTTAGTGATTCAGATGAAGAACCACTAGCAGCTAAAATTTCAGATTCTGTGACTAAAAGTCTTAGCGCAATTAAGATCTCTGATAGTAGTAGAGATGCCATTGATGATGTGGCATTGGGAGAGAAAGATACCACTAGCTTTGTTAAGTCTGATAGTTTTCGTTTCACCAAGATTGTTGATGGTTTGGAAATCCCTGCCTTGGTTGGTAACGAGCTTATCagtgaaaataaaactgaagaAAACTCGATGGTCAATAGAGAATCTAGAGTAAAGCCATCTAAAACAAATAAAGAAGTACTTAATGTAGATGAAAAGAAAACCTTTAAGACTGTTGCTAAGagacaaaataaaactaaatttaagtccaaaaaaataattaataagactGAACCTGTGATATTTAACACATCAAAGGATTACAAGAATCCTAATTTATCTATACTTATTGATAATGAAACTAGGAAGAAGGCCGATAATCACAGAAAAATAGATAGagataagaaattaaaatgtgtTCCTGATGTGAGCAATATTAATCCGATACCTTCTAATCAAGAGTCTTCTAAAATATTTGGTATTGCTTGTAAAGCAAGCCCTGATAGTGCAGTCATAATTGATAAGACCAAAATACTTACTAAAGTAAGGAAGAATAACAACACAGTTGAAAAATCTAACCTGGAAGATGCAAAAAGTAAAACGCAAGAAGATCTGGAAATTTCTCAAAATAGTGTTTTGTCAAAAAACCTTTGTAAAGATGGCAGAAGTAGAAAGTTTATGAAATCAAATGAATATATTGAAAGGTGGCTGAATAATAGTGTTAGGTTAGTTTCTGCAACGCTTACCAATGACAATGAGTCTACTCCAGTAAACAAAAGACTGACCCCTGCCATCCCTGAGAATGCAGAGTCACCACAAAATGCTAAATATTCAATTCTAGAACACAAGCAATTCTTATCTCAAGTGCTTGATACTAAATCTTCTATAGATGCTAGTGAAGGCTACAAGAGtttggaaaaaaacaaaatttcagaAATCTCGGATAATGTTGAGCATCTAAGTCAAGGatacaaaaaaatctctatAAGCTCCGAAACCAATAATGACAAGAGAGATGACACTCCAGTCAAGAATCCAATATCTTCGCAGGTGCCTTCCAGTGATCAATCactgaatatttatgaatttgaaaGCGAGTCTGAAATGGTAACTACACCATCGCCCAGAAAGCAAAGCGGCTCGAAAGTTTCAAGTGACACTTTGTGGAAACCTAAAGCTGTAAATGATAcacgcaaaataaaaaaacctaatttgAGTTACGATTCCCCTAAAAGACGCACGTTTCCTAATAGTGCTAACTATAATGAAGTAGAAAAACAACAGGCCTTGAAAAATGTTGCAGGGGAAACAAAGGCAGCAATCTTGCCTCGATCAAGTTCAACCTTGATCGAGGCAATAGAATCAGAAGAACATGGAAGTAAACCAAGTGTGGCCACTTCTCCGATAGTAGAATCCAGCTTTAAGAGTCAATCTGATAATTTAGGGAAGTTTATGGATGTAGGTGCGAAGAATGCAAAAAGTGATGATTCCGAAGGACACTTGTTTTATATACCTTTGCAAGGTGTGTCCAAGACCGGAGTGAATATGGCTGAACACATGATTCAAGGAGTTGCTGTAAAACTTGGTTCACAAGGTCCCGGACAACGTGTGATCATGCGGGCAAAGCTTGTTACTAAAACTCAAGTCGGAATAAATAAGACCAATGAGAAACTGGCTGTGAAACAAGCCGGGCCCGTCGAAGACATGGTCAGAAGTGTTTTAGGAGCAATGCCCGCAAGTACCACATTTCAAAGCGGTTTTCAAGcaactgttaaaaataaagttgatgAGGTTACCATTGTTAATgctaagaaaaaaaagattagtATGGCGGCTTCTCCTGCTTATCCTGTTAAATGGCCGCCTGTTTCTCGGTCGGGCAATGCGCAGAGACGCGGGCTGGCATGGAGTGCAGCCGGGGAGGTCATTAACCACACCAACAACACTGCATTCCCACATATGGATGATCCTGCACAGATGGTTGAAGCTCCTGTCTTTAGACCCACCGAAAAGGAATTTCAGGACCCTCTGGAATTCATAGAGAAGATAAGTCCAGTGGCCGCGAGGTATGGATTGTGTCGCATTGTTCCACCGCCCAGCTTCAAGTCCGAGTGCAAGATTTCCGATGACATGCGCTTCACGCCGCACAACCAGTACCTTCACCGCATGCTTCATCGCTGGGGACCTTCCGCTCGTGAATTGTgtgccattaaaaaatatctggcAACACAGAGCGTTTCCTTCAAGCAGCCTCCCacgCTCAGTTCCATTGAAGTGGATTTACCCAAATTGTACCATGTGGTGCAAAACATGGGAGGTTTGAAAAAAGTTTTAGAGAAGAAAATGTGGTTGAAGGTTGCTGAAGAGATGTGCCTACCCCTGAATGTGCATTACATGGACATTCGCCTCGATGAGATTTATTGCAAATACCTTTTGCCATATGACACACTATCTTTTGATGAGCGGCAGAAGCTGTTTGAATCCGTAGACCAGGAATGGGAAAGGCGCCAACGTCGCATGCAAAAACCAGGTGGCGCTTCACAGGCCCAAGATCCACAGTCTAGCATAACAGCTGATGTAGATGAATGCATCACAAGGGGTCGCTCTACCACACTCGGGTCATTTGCACGCCTTGCCCGCAATACAATGGCCATGCAGTTTGGAAAAGTAGTTCAGCCCCAACCTGATGAG
Protein Sequence
FIPFGVRKQASQCPAGNTSARLALQALRSQYSRERQNKLRCLAFRNSGDAGEQPKRVQTRSCKVVKATKPLNGKTKMNGASSEYKVIRRHRTVAPRTEAKLSTAPTPTRDRGLALRNRQCPKPAPQKPDKKLIKTPLDVRVVIEKKVIKLESQINVLRSVTGRRHITRQTNTNITKSKISNNRTDRLENVHYTRKAFKIPLIRRDTRVLTSNSALSKTRSGKLRKINVINVRRKNVPNKTTKLAETTSHKSSKDVSVIADFSSGDDEPLYKKICSVKQVKKITPDVKSAQAEKTCSQNMLLQTPRIHFTRNNGRNTDVGQDKASSVSSKELPESQNKQITTTKTRITRHNATQFNPTDRSKSSIIQSTVLIINESSKLNIVKDYDSKVYIEGNNYTLPRIEIDSKDIEVDFNAFEAKYAKSVASILANSGGALFEKSFSDSDEEPLAAKISDSVTKSLSAIKISDSSRDAIDDVALGEKDTTSFVKSDSFRFTKIVDGLEIPALVGNELISENKTEENSMVNRESRVKPSKTNKEVLNVDEKKTFKTVAKRQNKTKFKSKKIINKTEPVIFNTSKDYKNPNLSILIDNETRKKADNHRKIDRDKKLKCVPDVSNINPIPSNQESSKIFGIACKASPDSAVIIDKTKILTKVRKNNNTVEKSNLEDAKSKTQEDLEISQNSVLSKNLCKDGRSRKFMKSNEYIERWLNNSVRLVSATLTNDNESTPVNKRLTPAIPENAESPQNAKYSILEHKQFLSQVLDTKSSIDASEGYKSLEKNKISEISDNVEHLSQGYKKISISSETNNDKRDDTPVKNPISSQVPSSDQSLNIYEFESESEMVTTPSPRKQSGSKVSSDTLWKPKAVNDTRKIKKPNLSYDSPKRRTFPNSANYNEVEKQQALKNVAGETKAAILPRSSSTLIEAIESEEHGSKPSVATSPIVESSFKSQSDNLGKFMDVGAKNAKSDDSEGHLFYIPLQGVSKTGVNMAEHMIQGVAVKLGSQGPGQRVIMRAKLVTKTQVGINKTNEKLAVKQAGPVEDMVRSVLGAMPASTTFQSGFQATVKNKVDEVTIVNAKKKKISMAASPAYPVKWPPVSRSGNAQRRGLAWSAAGEVINHTNNTAFPHMDDPAQMVEAPVFRPTEKEFQDPLEFIEKISPVAARYGLCRIVPPPSFKSECKISDDMRFTPHNQYLHRMLHRWGPSARELCAIKKYLATQSVSFKQPPTLSSIEVDLPKLYHVVQNMGGLKKVLEKKMWLKVAEEMCLPLNVHYMDIRLDEIYCKYLLPYDTLSFDERQKLFESVDQEWERRQRRMQKPGGASQAQDPQSSITADVDECITRGRSTTLGSFARLARNTMAMQFGKVVQPQPDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-