Basic Information

Insect: Glossina palpalis
Gene Symbol: ttk
Assembly: GCA_000818775.1
Location: Scaffold234:255633-280330[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.6e-19 1.4e-15 56.8 0.0 2 45 284 328 283 328 0.97

2 2 5.5 1.2e+04 -3.8 0.9 3 11 361 369 361 372 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.6e-19	1.4e-15	56.8	0.0	2	45	284	328	283	328	0.97
2	2	5.5	1.2e+04	-3.8	0.9	3	11	361	369	361	372	0.81

Sequence Information

Coding Sequence: ATGTCCGTACAACAGTTTTGTTTACGTTGGAATAATCATCAGCCGAATTTTATAGCGGTGTGCTCGACTCTACTGACGAGTGGTACGTTAGTCGACGTTACTTTAGCGGCCGAAGGTAGGCAACTACAAGCCCACAAAATTGTTCTCTCAGCTTGCAGCTCCTATTTTCAGACACTTTTTACAACGAATCCATGCCAGCATCCCATTGTTATATTAAAGGATGTACAATATGATGATCTTAAAACTATGGTTGATTTTATGTACTATGGTGAAGTAAACGTTTCGCAAGAGCAGTTACCGCATATTTTAAAAACGGCGGAGATGCTTAAAATAAAAGGACTCGCCGAAATGCCCACCGATCCTGCTAATTTAACTAAGTCCGATAGTTCGGGAGAACGTGTCAATTCCGAAGATCAGCACAATCCATCTTTAGATGCGGCAACGACGGGGGGCTTAACGCTTTCACAAATGAGCCAGATGTCATTTGGAGGAAATGCTGGAAATAGTGGTCTTGGTGGCCTAGCTGCCCATCCTTTACATACGGCGAAATTACTTAAAGAAGCCTCTAACAATGATATGGAAACACATCCCCAAGATTCGGATAGTTTGGATGATGCACACGGTCATGTACATATGCAAATTAAACCTGAAGTTGACATCAGTGGCGTACAACAGTCAATACCATTAGATATATCTGGGGCTACAACGCCTTCAGAACATGATGCTCCTAACACGCAATCTGCTCATTCGGGTAACGCGTCTGCGGGTAGTAGTTCCAATAATATGTCTACAAGTAATTCAAATAACAGTGCCAGTGTGAAACGTAAACGATCTGTTAATCCACAAGGCGATGAGAATTTCATACGCGCTTTGGAAGCAGTGCGTTCGGGTGGTATCGGTTTTTGTAAGGCTGCAAAACTGTACGGTGTCAATAATCGCACGCTATGGTTAGAATATAAGAAACGGGGCTATCCCGTATCTCGACCGAGTATAAAATCGCGTGTCGTCAAACAAGAACCGAATTTGTCGCCGTCACCTACCCCGCCCGCTAACACTGCCGATGATACAAATGAAAATTATGAACATATGGCGGCAGCTGTCGCGGCTGCACAAACTGCCGCTCTTAATATGCAAATACCACCGACTTCCGATACGCCGACACCTTCGTTAATGTGCACACCTCACCATGCCGGCACAACGGCTAGTGCTGGCACTCATCCCACAATGATGAGTTTTCTCGACACGCGACATATTGACTTTCCTCCCAGTCTGCACTCCATGTCCAGACAACGATACATTGATGCCACAGGCGCGAGTGGGGGTCCCGGCGCGGGCACTATCAATcgattaaatgttatttaCGGTAGGATTTCGAATGCGATAACTTTGGGGTTTAGTATCCTATACTatgtaaatgatgataatgatgatgataatgataatgataatgatgAACTTGTAGATGTCGATGTTAAACCCTTCACTACAGAATCAACTTGCAATCTTTCAGTTCCTTCCCATCAGCAGCAGCAGCAACAGCAACAACAAAACCAAATAGGTGTAAAACGTAATCGAGTACTTACGCGGCAACCGCGTGTTAAACGAGACAGTGACAGTTTATCTAATAATCAAGCGTCACCTGAACCTACTACATCGTCTGTCTCTGGTAGCGGCAGTGGTAACATTGATTTTGAAACTTTTGGCACCGGTGTTACAGGTCAAGCTCTTTACtcgtcttctcatcatattacgcatcagcaccagcaacagcaccagcaccagcaccaacaccagcaccagcaacagcaacagcagcagcaccaatcgcagcagcagcagcatgatcatcatcatcatcaccatcatcatcatcatttattaacagtaccgccaCGTATTGAAAGGCATTCATCCGAACCGGCACCCAGTGTCTCGCCAACTTCACCTCACTTACTTACTGTGCCACAGAATACGCCGTTCTTGATAAAACAACATTCGGATCCTCTGTTACCTAGTCAACATACGTCCGCTCATTTAACAGTTAGCAGTAGCGGTAACTTAAGTAGCACCCTAACCAATCCATTTGTATCATTACATCGTCAATATTCACATCAGCTTTCAAATACCAATGCTACATATGTCGCGTCTAGTGCACCCTTACAACACTCTCAACACATATCCCTACCGGAATCGATTTATGCCAGTTCCTCACCGCCGCCTGCTGGCTCATCGCATTACATAGTGCCGCAGCAAATGCAGCAATCACAGCAAACAATTGTTGCTTCTGGCAATAATAATTCAGTAACTTCAGCTGTTACGGATACTACAAGTCCCGTTAAAACTTTAAGTTTACCCCAGTTCACTACCATCTATTTGAGTTCCGAACGTTCTTCAGTTCCAATACCAGAGCGTCCCGTTTCCAGAGACAATATCTCAGTTTCATTGGCAGTTGCGTCCACATCGTCGACTCTCACTGTCGGCCACAATAACAGATTACGTACCTCTAAATCTCTACAACCACATGGGTCAACGTCGTCAACAACATCGGGTGTACACAGTGGCAGCACCAGCAGCTCACTCGAACATTTACCTACACTGCGTGTTAGAAACGAAGAGTTGCAAAGATCCGTATCCTCTCCACAGACTTCGCGAGAGATAATAACTTTGGAGAATCCACGTGCTAGTCATTGTCCAGTTATACGGCCTGGACCGGCCCTGGGTTGCAATTTTTGTTGGAATACTATCGATGGGCATGGTCGAATTTTGCGGCGCAAAACTAAATATCATTGTCCTGAAGTATATTTGAAAAAACGTTTCTCCAGATCAATGCCAATCACCTTTGCTGCGTACCTAAAAGCTATACCCACGTAG
Protein Sequence: MSVQQFCLRWNNHQPNFIAVCSTLLTSGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSSGERVNSEDQHNPSLDAATTGGLTLSQMSQMSFGGNAGNSGLGGLAAHPLHTAKLLKEASNNDMETHPQDSDSLDDAHGHVHMQIKPEVDISGVQQSIPLDISGATTPSEHDAPNTQSAHSGNASAGSSSNNMSTSNSNNSASVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAAKLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANTADDTNENYEHMAAAVAAAQTAALNMQIPPTSDTPTPSLMCTPHHAGTTASAGTHPTMMSFLDTRHIDFPPSLHSMSRQRYIDATGASGGPGAGTINRLNVIYGRISNAITLGFSILYYVNDDNDDDNDNDNDELVDVDVKPFTTESTCNLSVPSHQQQQQQQQQNQIGVKRNRVLTRQPRVKRDSDSLSNNQASPEPTTSSVSGSGSGNIDFETFGTGVTGQALYSSSHHITHQHQQQHQHQHQHQHQQQQQQQHQSQQQQHDHHHHHHHHHHLLTVPPRIERHSSEPAPSVSPTSPHLLTVPQNTPFLIKQHSDPLLPSQHTSAHLTVSSSGNLSSTLTNPFVSLHRQYSHQLSNTNATYVASSAPLQHSQHISLPESIYASSSPPPAGSSHYIVPQQMQQSQQTIVASGNNNSVTSAVTDTTSPVKTLSLPQFTTIYLSSERSSVPIPERPVSRDNISVSLAVASTSSTLTVGHNNRLRTSKSLQPHGSTSSTTSGVHSGSTSSSLEHLPTLRVRNEELQRSVSSPQTSREIITLENPRASHCPVIRPGPALGCNFCWNTIDGHGRILRRKTKYHCPEVYLKKRFSRSMPITFAAYLKAIPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00750557;
90% Identity: iTF_00750557;
80% Identity: iTF_00750557;