Gpap008844.1
Basic Information
- Insect
- Glossina palpalis
- Gene Symbol
- ct
- Assembly
- GCA_000818775.1
- Location
- Scaffold23:346104-418455[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-27 1.5e-23 82.7 0.0 3 72 545 615 543 620 0.94 2 4 4.5e-32 4.5e-28 97.2 0.0 3 77 969 1044 967 1046 0.96 3 4 1.8 1.8e+04 -4.0 0.2 29 47 1131 1149 1121 1149 0.86 4 4 4.6e-31 4.6e-27 94.0 0.0 3 77 1216 1291 1214 1293 0.96
Sequence Information
- Coding Sequence
- ATGATGATGGAagctgctgctgccgcggcagctgctgcggccgctgcggctgccgTGCAACAGCAACAATCCCCTATGCATTCACCCCAACCCGCAACTCAAGACGATAATGAACATGAAGATTCAACCGTCCCACAGAATATTATGAACAAAGACGGCGATAATTTTAATGTCACTACCACCGCTGCTACAATAAGTGATACTACCATCAATGTTTTTGCATCCGCAACAGCAAATGATAGCCGCAACGTGCCACAGGAAATAGGAGACCAACATAGCAATGGCAATAAAATCGACCGCGATGTTGATAGAATACTTGCAAATAGAACTGATAATGAAAATTACTTATGttgcaatataagcaatagcaatagcaacggcaacaacaacaacaacaacaacaacaacaacagtaacaatagtaacaacaacaacaataatactaataataataacgggatgaatagctgcagcagcaataccattaataagatcaataatagcgataattctgcaatgagtacaaacgagagccatacagaaaatatagcaaatctgagcaaagaaagcgaagcaatTCTCTCGGAGGATTATAACGAAAAGGAAGAACAGCTATGTCCAGTTAAGAATATCAATCTGAGTCCTTCTGAATTATTAGCTGCCAAAGACAAAGAGATTGACGCCCTTTTCGATGAAGTTAAGCGGTTAAGAGCAATAGAACAAACGCATTTGTTACAAATTCGCAGACTTGAAGAGCATTTAGAAGCTAAGCGTCAACATATAATGCGGTTGGAGAACCATTTGGATAAACAAGAAAAACTTTATCCTCTAATCGAAGTGAGTTCGCCATCTGAGTCCGATTCGCAGATAATGCAAATGAAAAATGTGTCAAATGCAAAGGAAACGAATGCGGATGACCCCAAAGAAATTTTTCATACGGaaaaaaaTGTAGAAACTCTCGACGACGATCAAAACGAAGATGACGAATGCACTAAATTGACTGAGAATATCAGTGAAATCGATATCAAAAAGGAAACACAAAGTCCACTAAGCTTAGACGCTATAAGCCAACAAAACGCGATTGCTGCCGCGGCCGCTGCAGCTGCAGCTTGCAATAATGATCCGAATAAATTCCAAGAATTATTAATGGAAAGAACCAAAGCATTAGTGGCTGCTGAGACCCTAAAGAGTTCTGATGATACTTTACAGCATATGCCGCCAAACCATCAATTGCCATCGCACATAACCGATCATCATGAAAAAATAGGTCTCAATCAACAAGATTCAATGTCAGCATCCAGCGCCAGTACGCCAAATCTGCAAGATCAACGGTCTAACGATGAGCACGGCCTATCGTTAAACGGATCTCATAAGTCGCTCGACGATAACAATAGCAACCTGTGCGCCACACCTACAAATCCTATAGGACCTCATCACCTTCCACACAGCTTCCTGCCCGGTCTACCATTCCAATTTCAAGATCGAGGACACTTTCGTTTCGCCGATGAACTGCAACTGCCGCCTGGTACGTCAATGGCTGGCCGTTTAGGAGAATCCCTCATACCCAAAGGCGATCCGATGGAGGCTAAATTACAAGAAATGCTTCGCTACAATATGGATAAATATGCAAATCAAAACCTCGACACTATGCACATCTCACGGCGTGTCAGGGAGCTGCTATCAGTTCACAACATCGGTCAACGCATATTTGCCAAATACATCTTAGGCTTATCGCAGGGTACCGTATCCGAGTTGCTGTCGAAACCCAAGCCATGGGAAAAGCTCACCGAGAAGGGACGTGACAGCTATCGCAAAATGCATGCCTGGTCATGCGATGATAATGCCGTTATGCTACTCAAATCGTTAATACCCAAGAAAGATTCCGGCTTACCGCCGTACGGTGGCCGTGACGATAGCATGTCTGATGAGCGTATTGCTCATATATTAAATGAGGCTTCGTCGATGATGAAAAGTTCGGTATCTTCTGGTCTGCAGCATCAATTAAAAGATGAACAACAAAGACGTGTTCATGAAGATTCGCACAGCAATGAGGATTCCAAATCGCCACTCCAACCTTGCCCTTCGCCGTTCTTTAAAGAGCAAATCAAACAAACGCAAGACTCGTGTATTCAAAGTCAGAGCAACCCTCATATACGTCAAGAGGATGTGAATCCTGAGAAAATGGCTCGCCTTTATCAAGAGATAATGACTCGTGCTCCCCGAGAAGCTTTTCCCAGTTTTATGCTTAATCCtttttttAGTGGTGGCTTACCCGCTGCCGCTGGTATGCCAGGTAATACGTTTAGTGGCTTAGCAGCTGATGAGAGTATGCGATTGGCTTTCGAGAGGGAAATGGTTAAATTACAGCAACAAGCACAACCCCCAAATTTTCCTAATTTTTCTAGCTTAATGGCTTTACAACAACAAATGCTGAATGGAGCGCAAGATCTGAGCTTAGGCAAAGAAACGGCAGTTAAAGAGCTTAAAACGAATGGACAACGCAACTCTTTTACTTCCTCACAAACTTCTTTAGAAAATTCTAGTACAGTCGCCCAACAAAATACAACAAATGCCAAAGATAGCTCCACTCCAAGTGTGGAACGATTATATCCCGGTATGTGCAAGTCCGATACAGGCAATAATACTCCTGCCTCACAACCTTCCGCCAATACACCAGCTCTGAATGCAAATTCAGCTGCCCCAAGTCCACTTAGCAACACCATTCTCCCGCCTGCAATGACATCGAACGACGATTTTTCTACTACTGCCAGTCCTCTACAACGTATGGCGTCCATAACCAACTCTTTAATCACACAACCGCCCGTACCACCGCATCATCCACAACCTCAACGTCCTACAAAAGCCGTGCTTCCACCCATAACGCAGCAACAATTTGATATGTTCAACAATCTTAATACCGAAGATATTGTTCGCCGTGTCAAAGAGGCTTTATCGCAATATTCGATTTCTCAACGTTTATTTGGAGAATCAGTGTTAGGCTTATCTCAGGGATCCGTTTCTGACCTCTTAGCTCGTCCTAAGCCGTGGCATATGCTTACGCAAAAAGGTAGAGAACCCTTTATACGTATGAAAATGTTTCTCGAAGACGAGAATGCGGTTCACAAGTTAGTTGCCAGTCAATATAAAATTGCACCTGAGAAACTTATGCGCACAGGTAACTACAGTGGAACACCTCAGATTCCTCAAGGTTTAGCTAATAAAATGCAGGGAACGCTACCTATGCAAAAAATGATTAACGATTTGAAACTACAAGAACCTACCCAGGCTCAACAGATCATGCAACAAATGCAAGCGGCTGCTGTTATGTCTGCTGCAATGCAACAACAACATCAAGCTCAACAAAGTCAGCAtcaggctgtagctcaagccgcacaagctgtagcccaagcagctcaaCATCACCAAAGCATGCTGTTAACATCGCCAGGCCTGCCACCGCAACATGCTATTCCTTTACCAGCTGCCACCACAAATCCTAATTCTAGTGTTCCGACGACAGCATCAGGGCCCAGTGGAGAAAAGAAACCGATGATAATGCCGATACACTCACCACATACGCCAAATGCCATGCGAAACTTACATCAGCATATGTCACCAACAGTATATGAAATGGCTGCACTCACGCAAGACTTAGATACTCAAGTTATAACGACTAAAATTAAAGAAGCCTTACTCACCAACAATATTGGGCAAAAAATATTCGGAGAGGCGGTTCTCGGCCTTTCTCAGGGCTCTGTATCGGAATTATTGAGCAAACCCAAACCTTGGCATATGCTCTCAATTAAAGGTCGCGAGCCTTTTATACGTATGCAATTATGGCTGTCCGATGCCAATAATGTTGAACGTCTTCAAGTTCTAAAGAACGAGAGACGGGAAGCATCAAAGCGCCGACGTTCCACGGGGCCGAATCAACAAGATAACAGTTCAGATACTTCAAGCAATGACACTAATGATTTTTATACTAGCAGCCCAGGTCCAGGCTCAGTTGGTAGTTCAGTTAGTGGCCCTACTCCAAATAAAAAGCAACGAGTTCTCTTCTCTGAAGAACAAAAGGAAGCATTACGTTTAGCTTTCGCTTTAGATCCATATCCAAATGTGGGAACAATTGAATTCCTAGCCAATGAGTTAGGCTTGGCGACACGCACCATTACCAATTGGTTTCACAACCATCGCATGCGTTTAAAGCAACAAGTGCCTCACGGCCCGCCGGGTGCCGAAAATCCGATACCTAGTCGAGAAAATACAAATTCAACACCATTTGATCCCGTCCAGTTTCGCATACTACTTCAGCAACGGCTACTTGAATTGCATAAGGAGCGCATGGGTCTAACTGGCACTAATCCTTTGCCTTACCCGCCCTATTTTGCAGCAGCAGCACTACTCAGTCGCAGCCTTGCCGGTATACCTAACGCCACGCCAGCTGTCCCAGGTATAGCCGGCGAAAGTGAAATTCATGCTCTAAATCAAGCTTTTAAAGAGCAAATGTCCGGTTTAGATCTAAGTATGAGTTCACTCAAAAGAGAACGAACCGATGACTTCGAGGATGATCTGGAAGAAGGGCATTTAAGCGAAAACGACAACGACTCCCTAGACGAGGATGATAAGTCGGGCGACTATAAAGACACACCTCGTTCAAGCATTAGTAGTAGTGATCGATTTTTTGGCGCTAATATGCGCTCTAACAAACGAAAACGCGCAGCACCTCAATGGGTTAATCCAGCAGCCGTTGGACTTAATGCTACACCCACCACAGAGAGCAGCGATCGACTTATTAACGGAGTTTGCATAATGCAAAGCAATCAACGCACTGAACCTATTTCAGATCAAAACGAAGAAGAAATTCATAAAACTCAAACCTCAGAAGACCAAGAAATCGTTCATTCCGATATAATGGAACCTGAAGTAGTGATAAAACAGGAGAAAGCGGATTGCGAAAGTGACTCGGAGCAAAACTCTGCCTTAACAAAAAGCAAAGAAGATAAAATCAAAGTAATGCAAGAGGAGAAACTACGAATGGTACGTGTAAGTCGCTTAAGTAACGAAGAGGAACAGATCAGTACTGCGTCAACCTGGAATTATTAA
- Protein Sequence
- MMMEAAAAAAAAAAAAAAVQQQQSPMHSPQPATQDDNEHEDSTVPQNIMNKDGDNFNVTTTAATISDTTINVFASATANDSRNVPQEIGDQHSNGNKIDRDVDRILANRTDNENYLCCNISNSNSNGNNNNNNNNNNSNNSNNNNNNTNNNNGMNSCSSNTINKINNSDNSAMSTNESHTENIANLSKESEAILSEDYNEKEEQLCPVKNINLSPSELLAAKDKEIDALFDEVKRLRAIEQTHLLQIRRLEEHLEAKRQHIMRLENHLDKQEKLYPLIEVSSPSESDSQIMQMKNVSNAKETNADDPKEIFHTEKNVETLDDDQNEDDECTKLTENISEIDIKKETQSPLSLDAISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAETLKSSDDTLQHMPPNHQLPSHITDHHEKIGLNQQDSMSASSASTPNLQDQRSNDEHGLSLNGSHKSLDDNNSNLCATPTNPIGPHHLPHSFLPGLPFQFQDRGHFRFADELQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTMHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWEKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGGRDDSMSDERIAHILNEASSMMKSSVSSGLQHQLKDEQQRRVHEDSHSNEDSKSPLQPCPSPFFKEQIKQTQDSCIQSQSNPHIRQEDVNPEKMARLYQEIMTRAPREAFPSFMLNPFFSGGLPAAAGMPGNTFSGLAADESMRLAFEREMVKLQQQAQPPNFPNFSSLMALQQQMLNGAQDLSLGKETAVKELKTNGQRNSFTSSQTSLENSSTVAQQNTTNAKDSSTPSVERLYPGMCKSDTGNNTPASQPSANTPALNANSAAPSPLSNTILPPAMTSNDDFSTTASPLQRMASITNSLITQPPVPPHHPQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQIPQGLANKMQGTLPMQKMINDLKLQEPTQAQQIMQQMQAAAVMSAAMQQQHQAQQSQHQAVAQAAQAVAQAAQHHQSMLLTSPGLPPQHAIPLPAATTNPNSSVPTTASGPSGEKKPMIMPIHSPHTPNAMRNLHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGPTPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGAENPIPSRENTNSTPFDPVQFRILLQQRLLELHKERMGLTGTNPLPYPPYFAAAALLSRSLAGIPNATPAVPGIAGESEIHALNQAFKEQMSGLDLSMSSLKRERTDDFEDDLEEGHLSENDNDSLDEDDKSGDYKDTPRSSISSSDRFFGANMRSNKRKRAAPQWVNPAAVGLNATPTTESSDRLINGVCIMQSNQRTEPISDQNEEEIHKTQTSEDQEIVHSDIMEPEVVIKQEKADCESDSEQNSALTKSKEDKIKVMQEEKLRMVRVSRLSNEEEQISTASTWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00746597;
- 90% Identity
- iTF_00750349;
- 80% Identity
- iTF_00750349;