Gpap004326.1
Basic Information
- Insect
- Glossina palpalis
- Gene Symbol
- kn
- Assembly
- GCA_000818775.1
- Location
- Scaffold727:35372-42323[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-49 5.1e-46 157.3 0.0 45 137 2 94 1 102 0.97 2 2 0.38 1.9e+03 -3.1 2.3 507 531 137 161 129 169 0.54
Sequence Information
- Coding Sequence
- TTGGGTATCGGTCGAGCGCATTTTGAAAAACAGCCGCCCAGTAATTTAAGGAAATCAAAtttttttCATTTTGTGATTGCGTTATACGATCGTGCCGGTCAGCCTATTGAAATCGAAAGAACTGCATTTATTGGTTTCATTGAGAAGGAATCGGAAACCGATACAACGAAAACTAATAATGGCATACAATACAGATTACAGTTACTTTATGCTAACGGTGCTAGACAAGAACAGGACATATTCGTTAGGCTCATTGACTCTGTTACAAAGCAAATTTTATTGTGTGCGGATATTCCAGTAAAAGTAAAGTACACGTTAACGGAAGACACTTCACTCATGTCTTTGGCAAAATCATTCATGACAATAACGCACGTGGTGTGTATGTGGTATCGTGTGTCCTCAAATTACTACAATTGCTTCCGTTCCTTCtcaacaacatcgtcgtcatcatcatcattatcatcatcatcatcatcatcatcgggcaccagagtaaacgtaggcttcaaacgtagatttaactactttGTCATAAttttttttttttAA
- Protein Sequence
- LGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKESETDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQILLCADIPVKVKYTLTEDTSLMSLAKSFMTITHVVCMWYRVSSNYYNCFRSFSTTSSSSSSLSSSSSSSSGTRVNVGFKRRFNYFVIIFFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -