Gpap014292.1
Basic Information
- Insect
- Glossina palpalis
- Gene Symbol
- kn
- Assembly
- GCA_000818775.1
- Location
- Scaffold146:6191-20511[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-108 1.6e-104 350.4 0.0 229 385 1 164 1 167 0.99 2 2 1.4e-07 0.0007 18.1 18.7 422 542 167 285 163 292 0.56
Sequence Information
- Coding Sequence
- ATGTTCGTGCATAACAATTCAAAGCACGGCCGGAGGGCAAAACGTTTGGATACCACGGAAGGTCTATATCCGCCTTTGCCAGTGGCTACACCTTGCATTAAAGCCATATCACCAAGCGAAGGTTGGACGACAGGTGGCGCCACCGTTATTATAGTGGGTGATAATTTCTTTGATGGCCTTCAAGTGGTGTTTGGCACCATGCTGGTATGGAGCGAGTTAATCACTTCTCATGCTATACGAGTTCAAACCCCGCCACGTCATATACCCGGTGTAGTTGAAGTCACCTTATCATATAAGAGTAAACAATTCTGCAAAGGATCACCCGGTCGCTTTGTCTACGTTTCCCTTAACGAACCGACCATTGATTATGGTTTTCAGCGATTACAAAAGTTAATACCACGTCATCCTGGTGATCCGGAAAAATTACAAAAAGAAATTATTCTAAAAAGGGCAGCTGACTTAGTAGAAGCTTTATATTCAATGCCAAGATCGCCTGGTGGCTCGACTGGTTTTAACTCCTACGCCGGCCAGTTGGCTGTGAGTGTACAAGATGGTACCGGCCAATGGACCGAAGATGATTATCAACGGGCACAATCGAGTAGCGTTAGTCCACGCGGTGGCTATTGTAGCAGTGCTTCCACACCCCACAGTTCAGGGGGCTCGTATGGTGCAACTACAACGGCAGTCGCCGCGGCCGCTTCAAATGGCTATGGACCAACACCCAATATGGGCACATTATCATCATCTCCGGGCAGTGTGTTTAATTCAACATCAAGAGTTAGCAGCCTAAGCTTTAATCCGTTCACTCTGCCCACTTGTAATACACAAGGTTATAGCAGCAGCAACAGCGTTAGCAGTCAATTGGTTACATCAACAAAATAA
- Protein Sequence
- MFVHNNSKHGRRAKRLDTTEGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATTTAVAAAASNGYGPTPNMGTLSSSPGSVFNSTSRVSSLSFNPFTLPTCNTQGYSSSNSVSSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01132709;
- 90% Identity
- iTF_01132709;
- 80% Identity
- iTF_00748769;