Gpap002592.1
Basic Information
- Insect
- Glossina palpalis
- Gene Symbol
- retn
- Assembly
- GCA_000818775.1
- Location
- Scaffold1:3281061-3301348[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-19 4.9e-16 59.0 0.0 16 89 5 76 1 76 0.93
Sequence Information
- Coding Sequence
- ATGACAAAACTTAAAAGTTCGCCGATAAACCGTTTACCCATAATGGCAAAATCCGTACTGGATTTGTACGAATTATACAATTTGGTAATTGCTCGCGGGGGATTAGTCGATGTTATTAATAAAAAGCTATGGCAAGAGATTATAAAGGGACTGCACTTACCGTCAAGCATAACAAGTGCAGCATTTACGCTGAGAACGCAATATATGAAATATCTTTATCCGTACGAATGTGAAAAGAAAAACTTGAGTACACCCGCCGAACTGCAAGCAGCGATCGATGGCAATCGTCGTGAAGGACGTCGTTCTAGCTATGGCCAATACGAGGCCATACATAATCAAATGCCAATGCAACAAATGGCCCGACAAAGTTTGTCAGGTGGCTTGCAACAAATGTCGCCGCTGGCATTGGTTACACATGCCGCCGCCGCTAATAATCCACAAGCTGCTGCACAGGCTGCTGCTGCCGCAGCACACCATAGACTGATGACTGCTCCCGCCTTTGCCCAAGTGCCGAATTTGATGTCTCACGATTTTGAGCAACGCATGTTGGAATACTTGAAACTGCTTCAAGCGAACAAAGAGCAGAATGTAGAGGCGGCGGCATCCGCCATTAGCAACAGTAACGGCAATGGACACCCAATGACACATTCACAGCAACAATCGGCCCAACAACATCAGTCGACATCACGTCAGAGATCGCAAAGTCCCGATGTTAGTCAACATGAAGCATTCAATGTATTGGGAATGTCACGTGTAGCATTATGGCAAATGGTTAACAATCATGCAAGTCCACCCGTCTCAGTGAATGCATCTCTACATGGCGAAGGTGATAGCAGCGGTGATGTCGGCAACGGTAACGTCAAAACTGGCAGCGAAATATCAGGCATTAAACGTGAACACGTAACTAGTCCAGAGCAATATGGACGAGAAGACTTCTTCAACCATCAGCCGCCGCCTACAAAACGAGCTAATTTTTACATACCGGTCGCTCCTAATTTCCAATATAAAGACAACGACTCGAATGGTGATCCTCATCAAGAACCTGACGAAGATGATGGTGAACAAAATTCAACGGCGAATTCCCCACCTGGAGATGCAAATGAAAGACCCTTAAATGGTGTACCTGGTCATCTGCCGGCGTTCCAAGACATGAGCAACAGCGTACACCACGACAAATCTGATGATTCTGCCATAGAAAACTCACCGTCGACGTCGGCCGCGTCTGGAGCTACAACTCGAGTCTCGCCGGTATCAACCAAGAAAATTCATTTATCTAAGCAAGTCCATCACACTACCGACCCCTCTAGCGACAACCCTAACGGCATCGACAAATTAACGGCGTGTAACTCAGCTTTCGATTTATTATCTGGTTTGCAATTCCGAGTGACACGTAATGATATTAGTACAAATGGTGAACACCATCTTACAGTAAATCTGGAATTAAATGGCGTCACGTACTCGGGAATACTTAATGCAAATATTTCAAGTGCTACCAAAACGACGAAAGCCGAAAGCAACATTGTTGACAGCGGCAAGAATAACGATAATGATGGTAACAAAGTAAACTGTGTTGGTAATCATTCTGCCAGCACAAGCAATACCTATGCAAGCACATTTGAACAGCCGAAGGTCGTGGACTCTGCGATCGCTGAGACCGTAAGTGATACTGAAACGCCATCAAAAAGACCGACAGCTATCGTCACGTCAAATGGATCAACCAAGGCCTCGCTCAATAATACTTTAATCTCATCATAG
- Protein Sequence
- MTKLKSSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAIHNQMPMQQMARQSLSGGLQQMSPLALVTHAAAANNPQAAAQAAAAAAHHRLMTAPAFAQVPNLMSHDFEQRMLEYLKLLQANKEQNVEAAASAISNSNGNGHPMTHSQQQSAQQHQSTSRQRSQSPDVSQHEAFNVLGMSRVALWQMVNNHASPPVSVNASLHGEGDSSGDVGNGNVKTGSEISGIKREHVTSPEQYGREDFFNHQPPPTKRANFYIPVAPNFQYKDNDSNGDPHQEPDEDDGEQNSTANSPPGDANERPLNGVPGHLPAFQDMSNSVHHDKSDDSAIENSPSTSAASGATTRVSPVSTKKIHLSKQVHHTTDPSSDNPNGIDKLTACNSAFDLLSGLQFRVTRNDISTNGEHHLTVNLELNGVTYSGILNANISSATKTTKAESNIVDSGKNNDNDGNKVNCVGNHSASTSNTYASTFEQPKVVDSAIAETVSDTETPSKRPTAIVTSNGSTKASLNNTLISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00748768;
- 90% Identity
- iTF_00748768;
- 80% Identity
- -