Basic Information

Gene Symbol
Ubp1
Assembly
GCA_000818775.1
Location
Scaffold195:41148-79463[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 2e+04 -6.3 4.7 103 122 84 101 36 127 0.56
2 4 2 2e+04 -6.0 4.1 11 14 111 114 78 149 0.58
3 4 1.1e-53 1.1e-49 168.9 0.7 11 189 441 616 430 620 0.89
4 4 4.3e-14 4.2e-10 39.4 0.2 186 222 672 708 661 709 0.92

Sequence Information

Coding Sequence
ATGGCTCTTTCGCTATTTGCTGCTCCTACAGCGCATTACAATAATCTCAGTAACGATTTCTCTGATCTTTCATTTTTAATTGATTCATGTCCCTTAACAAATTATCAAAATCACTCACAAACGCAACAAGCAAAAGTTGTATTTAAAAATCTCAGCGAATCCGTTTCAATGGAATTTAATAATCATAACAACAGCAGTCCTGCTCatagtcataataatagtaataccaatagccctttacaacaacagcaacagcaacaacaacaacaacaacaacatcatacaatatcacaaaataatggtaacaataataataataatggtaataataataacagcagcagcagcaacagcagcagtagcagcagcagcaacagtagcagcaatggcagcaacaataacaaccacaacccccacaacggtcacactgcaacaaatacaacgcagCATACAAATTACACGAATCGTAATTTAATGAATGGATTTCATTCGCATCTCACTACTGATTATGAACAAGTGTTGACATTTGTTGATTCACCACCGAATTCTGAGGAATCCTGGCCAGACGATCAATCGAAGGGATCACCAGGACCACAAATAATAAATGTTCAAACGATTTACACGAACAACAGCTCACGTAAAAGACGAATGGATTGGGATTCACTCGACATTGGCAGCAATCATGGGGAAAACTCTATAAGCCAGCATCATACTGATGAGTTAATGAATAAACTAacgcagcatcagcatcatcatcacacgcagcatcaacaacagcataacacCGAAAAAGAGAAATATAAACGTGAAAAGTTAACCTGCGGTCGCTCTACTTGGAGTGACGATTTGGGTTTCGATTTAAATGCCGACTTCAACACTAATTCTTACATTAACAATGAATCGTTTATGCCATTTTCACCGGGTTTAACGGTTTTAAAGCAAGAGCCGCAAACTGAGCATTTGAAAATTAGTAAGACATCACTGAATACTTTACAAAATTCCGTTGGAATAAATGGTTCAAAAAATGAAAAGATCACTAATCAACAGGAATCATCGTCTTCGTCAGCCATAACCACAACGGCAATACAAAAACATAAAACGGATCATTGCGTTTGTAGTTCACCTCAAAATAATACTAACACTAATGGACAATTAGCGGAGGAGAATGTTAATCAAGATAAGACTAATAATATTCTTGATCCCGGTCGTCTCAGTACGGGAATACCACATCAACTTTTGACCATAGTTGGGAGCAGTAAAATTGAACAAAATGCTGCATCTACTGGCAACACTGCTGCTAACACTGCTACTACAAATCATGGTGCAACTACAGCTGACACAACGACAAATTCCTCCGTTAATACCGATGACTATAAATTTCAGTATATATTAGCTGCGGCCACCTCGATCGCCACAAAAAATAATGAGGACACTCTTACTTATTTGAATCAGGGCCAAAGCTATGAGATCAAATTGaaaaaaaTTGGCGATTTATCATTCTATCGCGATAAAATATTAAAGAGTGTCATTAAGATATGTTTCCACGAACGTCGTTTACAATTCATGGAACGTGAGCAAATGCAACAATGGCAGGCTTCACGTCCCGGCGAACGGATCATTGAAGTCGATGTTCCTCTATCTTATGGTCTCTGTCATGTCAATCAGTCATTGAATCCGAATTATTTAAATACTGTGGAAATTTTCTGGGATCCCATGAAAGAAGTTGGTGTTTACATTAAAGTCAATTGCATATCAACCGAGTTTACGCCAAAGAAACACGGCGGCGAAAAAGGTGTACCTTTTCGTTTGCAAATAGAAACTTATATAGAAAATACAAATACTAATACGACAATTGGACCAAAGACGCCACCTACGCCGGCGCCGTTATCGCCGCTACCAATGGCGGCCGGTCAATCGCCAACGCAGGTAGGTAATATAACACCCACTAGCAATGGCTTACAAACATTAGCTAATGCACTTAACATTGGGGGAGGTGCAAATGGTGGTAGTGGTGCTATCAAGCAGCCCATACATGCAGCCGCTTGTCAAATTAAGgttttcAAATTAAAAGGCGCTGATCGCAAACATAAACAAGATCGAGAAAAAATACAAAAACGTCCACAATCGGAGCAAGAGAAATTCCAACCCAGCTATGAATGCACGATTATGAACGACATCGCTTTGGAAATATTAACACCAAACgcagtaaatgcagcagcagcagcagcagccgccgcagcagcagtagcagggacaacTGGAAATGGTTGCTTTAGTCCCGAATATATGAAAATTTGGCCAAACTCACCTGTTCATATGCCTAAATATGATGGAATACTGCCGTACACTGGAGCCTCTCCCAATCCGAATAACAATAGTCCTATAGCTATTAATAGTGTCTCATCTACAAATTCATCAAATCTGAAATTAATGGACACAAATATGGTTATCAGTCAGCCAATGATTGCCGATATGGAAGATTATTCTAATAATATCAATATTATGCCGGAATCTTCCCCGGCTCAAGTAATACAATGGTTAACCGATCATCGTTTATCAGCATATCTCTCAACATTTGCACATTTTTCAGGAGCCGATATAATGAGGATGTCTAAGGATGATTTAATTCAAATATGCGGTCTTGCAGATGGCATTCGCATGTATAACATATTACGAGCGAAAACCATTTCTCCACGATTAACAATTTACGTCAGCTTGGATGGCAACAGTTATAATGCCATATATTTAATTACAAATACAGCAAAAGAATTATTGCAAAAACTCTTTAAATTGCCCGGTTTTTATGATATTGTAACGGCCAAGAGCACTACTACGATGAATGGTAATGGCCTACTGGAAACAAATGCTGGCAGTTTTAATACGTGGAATATGCATTCAAAGTATTCGGGAAGCGGCTCAAATATTTTCAACGATGTAAATAATAAAACTTTTATTTACATTTCGGGGCCCTCGGGAGTACATGTGGCCGTAACTGACGAGGTCTTAAACAACGAAATCAAAGATGGCAGTTTATACGGCTTGGAAGTGCaaaatgggaaagttttaatgaaattaattattaataatgaaaagtaa
Protein Sequence
MALSLFAAPTAHYNNLSNDFSDLSFLIDSCPLTNYQNHSQTQQAKVVFKNLSESVSMEFNNHNNSSPAHSHNNSNTNSPLQQQQQQQQQQQQHHTISQNNGNNNNNNGNNNNSSSSNSSSSSSSNSSSNGSNNNNHNPHNGHTATNTTQHTNYTNRNLMNGFHSHLTTDYEQVLTFVDSPPNSEESWPDDQSKGSPGPQIINVQTIYTNNSSRKRRMDWDSLDIGSNHGENSISQHHTDELMNKLTQHQHHHHTQHQQQHNTEKEKYKREKLTCGRSTWSDDLGFDLNADFNTNSYINNESFMPFSPGLTVLKQEPQTEHLKISKTSLNTLQNSVGINGSKNEKITNQQESSSSSAITTTAIQKHKTDHCVCSSPQNNTNTNGQLAEENVNQDKTNNILDPGRLSTGIPHQLLTIVGSSKIEQNAASTGNTAANTATTNHGATTADTTTNSSVNTDDYKFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVNQSLNPNYLNTVEIFWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNTNTTIGPKTPPTPAPLSPLPMAAGQSPTQVGNITPTSNGLQTLANALNIGGGANGGSGAIKQPIHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDIALEILTPNAVNAAAAAAAAAAAVAGTTGNGCFSPEYMKIWPNSPVHMPKYDGILPYTGASPNPNNNSPIAINSVSSTNSSNLKLMDTNMVISQPMIADMEDYSNNINIMPESSPAQVIQWLTDHRLSAYLSTFAHFSGADIMRMSKDDLIQICGLADGIRMYNILRAKTISPRLTIYVSLDGNSYNAIYLITNTAKELLQKLFKLPGFYDIVTAKSTTTMNGNGLLETNAGSFNTWNMHSKYSGSGSNIFNDVNNKTFIYISGPSGVHVAVTDEVLNNEIKDGSLYGLEVQNGKVLMKLIINNEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747974;
90% Identity
iTF_00749451;
80% Identity
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