Gpal011614.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- pnr
- Assembly
- GCA_000688715.1
- Location
- Scaffold265:88569-156176[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 5.2e+03 -2.8 0.3 19 26 58 64 57 65 0.80 2 3 2.6e-17 9.7e-14 50.8 2.4 1 34 577 609 577 611 0.98 3 3 1.9 7e+03 -3.2 0.4 11 18 683 690 682 692 0.72
Sequence Information
- Coding Sequence
- ATGTGTGGTATTTTAAAAGAATTGAGTAATATTTGTCGCTTGTGCCTAACTTTGCTGCAAGAAGATGAAATATCGGCACATGAAATATTTACCTCAGATGGAACACAAAGCAAGGCATGCAAATCATCAGCTTGCAATGTGAATTTTGAGACGCCCGAGAACCTGTGCAGcaataaaatgtgtaaaagctgtgataaaatgcaaataaagcaaaacaaaacagatttaaatcaaaacgcaaaaGTACCAGATGTGCCTTTGTCACTGACCTCCACTAAAGTTGATATAAATGATCACATTACTGAAACCCCCTTTTCAATTTTAAAACAACATCGAACTCATATATCAAGTTTATCTAAACACAACGATAAGGTTTTGCAATCTATTTTTGCCAATCTTGGTGGGGGAGATTTCTGTGATGACTCACCTCACATAACAACTCAAATACTCAAATGTCTCTCTTTAGAGGTTCTGCCAAATGACGGATTGCCTACTGTTGTTTGCTGCAATTGCAGATCTCAACTTAAAGTTTTTTGGAGATTTAAATGCTTGGCTCAAAAAGCTGATATAGCTCTAAGGAAATATCTCGACGCTTACAAGACCACAGAAGAGGGCCTAATGGAAGGTGAAACATGTTCGAACTCAACAATTTCATCCAAGACATATTTAAAGTCCTCCTCGGAAAGAATGGCAGCAAAAGCGTTAACGGAGCTAAGTAACTCAGCTAAAGCGAAACTTTTCTCATTAAAAGTTAATAAAAACATACAACCCTCCTTTGTTGAGGACAGTAATAGTACGAACAGTATTAAAAGCAAAAATTTCGGTAGGGATTTAAGTTTGGAGAGAAATATTGATACGGCAGATAATTCAATTTATGAAATGCCAAATCCTACAAATAAAAGATTTGAAAAATTACAACATGATTTGATAACGAATGAAGACAAAGATAAAAATTTAAGTTTACAGCAACAATTGGAAACAGCAGCAGTTCTTATGGACATAAGTAAAAAAGTTATAATATCGCCACCTTGCTCGAATCCCGAATCCCCATGTCTGGCATCAGACTCCAGTATTAAAAATTCTGTGATAAAAAGCAAACGTCCATTAGATAGCAAGTTAACTACAGAAATGGATTTATCAGTGAAAAAGCCCAAATTAGAATTGGCTAATTTTTCAGATTTATTAATATCTGAAGGTCATAACGATTTGTCTGGTATTAAAAGCTTTAGGACAAATGAATCATTAAATATATTCGAAACAAATGAAGATAAATCATCATCAGATTCCGAGCATAGCTTGGATTCGAACCGTTTGGAGATGGATATAACTACCTTAACCGAACGTCGAACACCGGAAAGTGTAGCTTCAGAGGATCATGGGACTGATGCAGCTACGACACAATTATGGCAGGCTCTTGCACATTCAGCAGCTAACAATGTTGAAAGCAACGAAACTAATCGGCTATTACAATTATTGAACAAGTCGTTCACATTTCCAGTTGCAGCTCCTAAGCCGCTTCTTCAAACGGACTCTCGTGAAGAACCCATAGCTTTACTAAAGAGTACTGACGAACAACTGATTAGCAAAGTGAAAATCTCGGATTGTATTGTAAGCACTGATGGAAATGAATGCATAACTAATCATTACATATCCATGGAAGACGCAGTTTATGATAAAAAGAATCCGAAAAACTCTACCTCAGCGAACAGTGCACAAAAGGGTATGTCATGCTCGAATTGCGGCACATTGACAACCACTATTTGGAGAAGAAATATACGTGGGGAAATTGTATGTAATGCCTGTGGTTTATATTTTAAATTGCATGGAATTAATAGACCACATTCAATGAGACGGGATACAATTCACACTCGCCGAAGACGACCGAAGGATTCTGAAAAATCGGaaaaaaaaaGGAATAAATCAGATAATTACGTTGCTGAAGCTATGGAAAAGAAATATCTGGAAGGTATTTCTACTTCATTGAATGAAAAATCTGAAGACGTGAAACTACGATTTGGGGGCTATGCGAATAAAGATATTATAACGGAATGGAGGAGGCAGATGGAAAGAAACAATCAAACGTAG
- Protein Sequence
- MCGILKELSNICRLCLTLLQEDEISAHEIFTSDGTQSKACKSSACNVNFETPENLCSNKMCKSCDKMQIKQNKTDLNQNAKVPDVPLSLTSTKVDINDHITETPFSILKQHRTHISSLSKHNDKVLQSIFANLGGGDFCDDSPHITTQILKCLSLEVLPNDGLPTVVCCNCRSQLKVFWRFKCLAQKADIALRKYLDAYKTTEEGLMEGETCSNSTISSKTYLKSSSERMAAKALTELSNSAKAKLFSLKVNKNIQPSFVEDSNSTNSIKSKNFGRDLSLERNIDTADNSIYEMPNPTNKRFEKLQHDLITNEDKDKNLSLQQQLETAAVLMDISKKVIISPPCSNPESPCLASDSSIKNSVIKSKRPLDSKLTTEMDLSVKKPKLELANFSDLLISEGHNDLSGIKSFRTNESLNIFETNEDKSSSDSEHSLDSNRLEMDITTLTERRTPESVASEDHGTDAATTQLWQALAHSAANNVESNETNRLLQLLNKSFTFPVAAPKPLLQTDSREEPIALLKSTDEQLISKVKISDCIVSTDGNECITNHYISMEDAVYDKKNPKNSTSANSAQKGMSCSNCGTLTTTIWRRNIRGEIVCNACGLYFKLHGINRPHSMRRDTIHTRRRRPKDSEKSEKKRNKSDNYVAEAMEKKYLEGISTSLNEKSEDVKLRFGGYANKDIITEWRRQMERNNQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00748652;
- 90% Identity
- iTF_00747883;
- 80% Identity
- -