Gpal018682.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- CAMTA1
- Assembly
- GCA_000688715.1
- Location
- Scaffold143:516234-541917[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-27 3.2e-23 81.8 0.7 8 79 9 79 7 80 0.96 2 2 0.0026 50 3.7 0.3 106 116 81 91 78 91 0.79
Sequence Information
- Coding Sequence
- ATGGTGATCGTTATTGGTCGCTTGGCTAATTTGGAAATAGCAGCGATTCTTATCAGCTTCGATAAGCACAACGAATGGCAATCGAAAGAAGTGAAAACAAGGCCGAAAAGCGGTTCGTTGCTGTTGTATTCGCGTAAAAAAGTCCGCTATCGACGCGACGGCTATTGTTGGAAGAAACGTAAAGATGGCAAAACAACACGAGAAGATCATATGAAACTTAAAGTGCAAGGCACAGAGAATCCCGATATTGTTTTAGTTCACTATTTAAATGTTCCCTATCCTGACGATAATAAAATGGCTGTTATAGCACCCAGTATAAGTTTATGGGGTGATAAAAAAGAGTGGACTAAAGAGGAGCTGGTCAGTCAACTGAAACCTATGTTATCGACAGTGACATCAGATGACGAATCAGATTCGGGAAATGATATTGAAATATCGACCGCAGAGACTGTCGAATCGATTGTTTGTCAACTAATGGAAAAACAACGTTTGTCACGACAAGCGGCTTTGGTTAAACAATTAGATTGCGGTTGTGGGGGTTCTTCGTGTGCTGATGGCAAAACTTGTTCACATCCGGTAATACGTAAGCCTAGTTTAGTGAAATCAAGTACTGAAAAACGTATAACACCAGCAATGTCAACTGACAGTTGCTCTTACAATACAGGGTCAGCTCCAAATGTTGTAATAGGTCCTAAGGTTAGTACTAATTATATTCGAGATGGTCAGAGCGAAGGTCTGCCCGTGAAGCCTCCAGTATGGAAGGTCAGCAATATTCTCATTATCATCAACACCATAACCATAATCAAATGCAACAGTTGGCTCAAGAATCTGCCATCAAATTTCAaataa
- Protein Sequence
- MVIVIGRLANLEIAAILISFDKHNEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTENPDIVLVHYLNVPYPDDNKMAVIAPSISLWGDKKEWTKEELVSQLKPMLSTVTSDDESDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGGSSCADGKTCSHPVIRKPSLVKSSTEKRITPAMSTDSCSYNTGSAPNVVIGPKVSTNYIRDGQSEGLPVKPPVWKVSNILIIINTITIIKCNSWLKNLPSNFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -