Gpal004882.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- ct
- Assembly
- GCA_000688715.1
- Location
- Scaffold276:78030-180976[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-27 1.9e-23 82.3 0.0 3 72 996 1066 994 1071 0.94 2 3 3e-32 5.6e-28 96.8 0.0 3 77 1420 1495 1418 1497 0.96 3 3 3e-31 5.8e-27 93.6 0.0 3 77 1667 1742 1665 1744 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACATTGCCACAAACAGCCGGTACAGCCGATATGGATTTGACGGCTGTGCAATCAATGGATTGGTTTTTCAAAAAGGAACAAATTTATTTATTGGCACAATTTTGGCAACAGAGAGCTACTCTTGCTGAAAAGGAAGTTAACACACTCAAGGAACAGTTATCCACAAATATTCCCAATACAGACGTTTGTACTGacagcgctgagcacagcagcgatttaactgcgatagtggcaacagcaacatcacctctcctatcaactacagcagtagcagcagcagcagcagcagctgcagcaacaacaacaacaacagcaacaacaactgtaattgataataacagtagtttggatagagcgacaacaataaacccaccaaacacccatttgtcaccaacaattttaagccataataacgttaacactcataatagtaacagcaataaATTGTTGAATACGGTTGCCGCTGCTATAACGCTTCAACAAAACGGTGGTAATCTATTGGCCACCACACCATCCCCATCGCCGCCACTTTCCGTTACTAGTTCACCTACAGCGTCCCAGCATACCACCACAAGTCAACTGAAAGGTTGCCTGAATCCTAAATTGTTCTTCAATCACGCTCAACAAGTAATGATGATGGAagctgctgctgccgcggcagctgctgcggccgctgcggctgccgTGCAACAACAACAATCCCCAATGCATTCACCCCAACCCGCAACTCAAGACGATAATGAACATGAAGATTCTACCGTCCCACAGAATATTATGAACAAAGAGGGCGATAATTTTAATGCCACTACCACCGCTGCTACAATAAGTGATACTACCATCAATGTTTTTGCATCCGCAACAGCAAACGATAGCCGCAACGTGCCACAGGAAATAGGAGACCAACATAGCAATGGCAATAAAATGGACCGCGATGTTGATAGAATACTCGCAAATAGAACTGATAATGAAAATTACTTATGTTGCAATATAagcagcaacaacaacaacaacaacaacaacaacaacagcaacactagtaataacaacaacaacaacagcaacaacagcaataataataataataacgggatgattagctgcagcagcaacaccattaataagatcaataatagcgataattctgcaatgagtacaaacgagagccataCAGAAAATATAGCAAATCTTAGCAAAGAAAGCGAAGCAATTCTCTCGGAGGATTATAACGAAAAGGAAGAACAGCTATGTCCAGTTAAGAACATCAATCTGAGTCCTTCTGAATTATTAGCTGCCAAAGATAAAGAGATTGAGGCCCTTTTCGATGAAGTTAAGCGGTTAAGAGCAATAGAACAAACGCATTTGTTACAAATCCGCAGACTTGAAGAGCATTTAGAAGCTAAGCGTCAACATATAATGCGGTTGGAGAGCCATTTGGATAAACAAGAAAAACTTTATCCGCTAATCGAAGTGAGTTCGCCTTCTGAGTCCGATTCGCAGATACTGCAAATGAAAAATGTGTCAAATCCAAAGGAAACGAAAACGGATGACCCCAAAGAAATTTTTCATACGGaaaaaaaTGTAGAAACTCTCGACGACGATCAAACCGAAGACGACGAATGCACAAAATTGACGGAGAATATCAGTGAAATCGATATCAAAAAGGAAACGCAGAGTCCATTGAGCTTAGACGCCATAAGCCAACAAAACGCGATTGCTGCCGCAGCCGCTGCAGCTGCCGCCTGCAATAATGATCCGAATAAATTCCAAGAATTATTAATGGAAAGAACCAAAGCATTAGTGGCTGCCGAGACGTTAAAGAGTTCTGACGAAATCGCAACCGATCGTATCGTTCAAGACATAACTAAGCCCGGCGACGACGTTGAGCAACATGTAGAAGCGACTAAAGTACCGAAAATCGAAGTAGATCTCGACGAAAGCGCGAAAAATATTGAAAACGCCGGCAGCTTAACCAAACAGTTAGAATCTTTTACAAATGTGCCAAGATCGATGAAAGAAACGTGTTTATTAAAATCAGACGTTGAGAAGCCGTCTTCGACAGAGAATGACGAGCTTTCCTCAGCCAATTTTAAGGAGAACGTTGAACGTTTCGGTTCATTGCTAGGAGAAGAGTTGGTTAATTCTTATTGGAGAAGAAGTTTCGATATAACCCTCAATGCCAACGCGTCGAAATCGTTATATACAAATGTTGCCAATATTACtcagcatcagcatcaacatcagaatcaacatcatcatcaacctcagcatcaacaacaacagaatatactgttgcaacaagccgtccatcagcataatcaactgcagcaacaacagcatcgtagtcatcatcatcagcatcaacaacagcaacagcaattgctaacacatcaccaattgcaacaacaacaacagcaacaacagcagcagcaacaacagccgcagcaaggacattcgtccactgcaCTGCTTAGTCAATTAGTTAATTCCACTTTTGCACAACAAACCAGTACTCAAACGAATTCTTCCATTCTTCGTTCAACAGATACTTTACAGCATATGCCGCCAAACCATCAATTGCCATCTCACATAACCGATCATCATGAAAAAATGGGTCTCAATCAGCAAGATTCAATGTCAGCATCCAGCGCCAGTACGCCAAATCTGCAGGATCAACGTTCTAACGACGAGCACGGCTTATCGCTAAACGGATCACATAAGTCGCTCGATGATAACAATAGCAATCTATGCGCCACACCTACAAATCCTATAGGACCTCATCATCTTCCACACAGTTTCCTGCCCGGTCTACCATTCCAATTTCAAGATCGAGGTCACTTTCGTTTCGCCGATGAACTGCAACTGCCGCCTGGTACGTCAATGGCTGGCCGTTTAGGAGAATCCCTAATACCCAAAGGCGATCCGATGGAGGCGAAATTACAAGAAATGCTTCGCTACAATATGGACAAATATGCAAATCAAAACCTCGACACTATGCACATCTCACGACGCGTCAGGGAGCTGCTATCAGTTCACAACATCGGTCAACGCATATTTGCCAAATACATCTTAGGCTTATCGCAGGGCACTGTATCCGAGTTGCTGTCAAAACCCAAGCCATGGGAAAAGCTCACCGAGAAGGGACGTGACAGCTATCGCAAAATGCATGCCTGGTCGTGCGATGACAATGCCGTTATGCTACTCAAATCGTTGATACCCAAGAAAGATTCTGGCTTACCGCCGTATGGTGGCCGTGACGATAGCATGTCTGATGAGCGTATAGCTCATATATTAAATGAAGCTTCGTCGATGATGAAAAGTTCGGTATCTTCAGGTCTGCAGCATCAATTAAAAGATGAACAACAAAGACGCGTTCACGAAGATTCGCATAGCAATGAGGATTCCAAGTCACCACTGCAACCTTGCCCTTCGCCGTTCTTTAAAGAGCAAATCAAACAAACACAAGACTCATGTATTCAAAGTCAAAGCAACCCTCACATACGTCAAGAGGATGTGAATCCTGAAAAAATGGCTCGCCTCTATCAAGAGATAATGACTCGTGCGCCCCGAGAAGCTTTTCCCAGTTTTATGCTTAATCCATTTTTCAGTGGTGGCTTACCCGCTGCCGCCGGTATGCCAGGTAATACGTTCAGCGGCTTAGCAGCTGATGAGAGTATGCGGTTGGCTTTCGAGCGGGAAATGGTTAAATTACAGCAACAAGCACAACCCCCGAATTTTCCTAACTTTTCCAGCTTAATGGCATTACAACAACAAATGCTGAATGGAGCGCAAGATCTGAGCTTAGGCAAAGAAACAGCAGTTAAAGAGCTTAAAACGAATGGGCAACGTAACTCTTTTACTTCCTCGCAAACTTCCTTAGAAAATTCTGGTACAGTCGCCCAACAAAATACAACAAATGCCAAAGAAAGCTCCACTCCGAGTGTGGAACGATTGTATCCCGGAATGTGCAAGTCCGATACAGGCAATAATACTCCTGCCTCACAGCCTTCTGCCAATACACCAGCTCTGAATGCAAATTCAGCTGCCCCAAGTCCACTTAGCAACACCATTCTCCCGCCTGCAATGACATCGAATGACGATTTTTCTACTACTGCCAGTCCTCTACAACGTATGGCGTCCATAACCAATTCTTTAATCACACAACCGCCCGTACCACCGCATCATCCACAGCCTCAACGTCCTACAAAAGCCGTGCTTCCACCCATAACGCAGCAACAATTTGATATGTTCAACAATCTTAATACCGAAGATATTGTTCGACGCGTCAAGGAGGCTCTATCGCAATATTCGATTTCTCAACGTTTATTTGGAGAATCAGTGTTAGGCTTATCTCAGGGATCTGTTTCTGACCTCTTGGCTCGCCCGAAGCCGTGGCATATGCTTACGCAAAAAGGCAGAGAACCCTTTATACGTATGAAAATGTTTCTCGAGGATGAGAATGCGGTTCACAAGTTAGTTGCCAGTCAATATAAAATTGCACCTGAGAAACTTATGCGCACAGGTAACTACAGTGGAACACCTCAGATTCCTCAAGGTTTAGCTAATAAAATGCAGGGAACGTTACCTATGCAAAAAATGATTAACGATTTGAAACTACAAGAACCTACCCAGGCTCAACAGATCATGCAACAAATGCAAGCGGCTGCTGTTATGTCTGCTGCAATGCAACAGCAACATCAAGCTCAACAAAGTCAGCAtcaggctgtagctcaagccgcacaagctgtagcccaagcagctcaaCATCACCAAAGTATGCTGCTAACATCGCCAGGCCTGCCACCGCAACATGCTATTCCTTTACCAGCTGCCACCACAAATCCTAATTCTAGTGTTCCAACGACAGCATCAGGGCCCAGCGGAGAAAAGAAACCGATGATAATGCCCATACACTCACCACACACGCCAAATGCCATGCGAAATTTACATCAGCATATGTCACCAACAGTGTATGAAATGGCTGCGCTCACGCAAGACTTAGATACTCAAGTTATAACGACTAAAATTAAAGAAGCCTTACTCACCAACAATATTGGGCAAAAAATATTCGGAGAGGCGGTTCTAGGCCTTTCTCAGGGCTCTGTATCGGAATTATTGAGCAAACCCAAACCTTGGCATATGCTCTCAATTAAGGGTCGCGAGCCTTTTATACGTATGCAATTATGGCTGTCCGATGCCAATAATGTTGAACGTCTTCAAGTTCTAAAGAACGAAAGACGGGAAGCATCAAAACGCCGACGTTCCACGGGGCCCAATCAACAAGATAACAGTTCAGATACTTCAAGCAATGACACTAATGATTTTTATACTAGTAGCCCAGGTCCAGGCTCAGTTGGTAGTTCAGTTAGTGGCCCTACTCCAAATAAAAAGCAACGGGTTCTCTTCTCTGAAGAACAAAAGGAAGCATTACGTTTAGCTTTCGCTTTAGATCCATATCCAAATGTTGGAACAATTGAATTCCTAGCCAATGAGTTAGGCTTGGCGACACGCACCATTACCAATTGGTTTCACAACCATCGCATGCGTTTAAAGCAACAAGTGCCTCACGGCCCGCCGGGTGCCGAAAATCCGATACCTAGTCGAGAAAATACAAATTCAACACCATTTGATCCCGTCCAGTTTCGCATACTACTTCAGCAACGGCTACTTGAATTGCATAAGGAGCGCATGGGTCTAACTGGCACTAATCCTTTGCCTTACCCGCCCTATTTTGCAGCAGCAGCACTACTCAGTCGCAGCCTTGCCGGTATACCTAACGCCACGCCAGCTGTCCCAGGTATAGCCGGAGAAAGTGAAATTCATGCTCTAAATCAAGCTTTCAAAGAGCAAATGTCCGGTTTAGATCTAAGCATGAGTTCACTCAAACGAGAACGAACCGATGAATTCGAGGACGATCTGGAAGAAGGGCATTTAAGCGAAAACGACAATGACTCCCTAGACGAGGATGATAAATCGGGCGACTATAAAGACACACCTCGTTCAAGCATTAGTAGTAGTGATCGATTCTTTGGCGCTAATATGCGCTCTAACAAACGAAAGCGTGCAGCACCTCAATGGGTTAATCCAGCAGCCGTTGGACTTAATGCTACACCCACTACAGAGAGCAGCGATCGACTTATTAACGGAGTTTGCATAATGCAAAGCAATCAACGCACTGAACCTATTTCAGATCAAAACGAAGAGGAAATTCATAAAACTCAAACCTCAGAAGACCAAGAAATCGTTCATTCCGATATAATGGAACCGGAAGTAGTGATAAAACAGGAGAAAGCGGATTGTGAAAGTGACTCGGAGCAAAACTCTGCCTTAACAAAAAGTAAAGAAGACAAAATCAAAGTAATGCAAGACGAGAAACTACGAATGGTACGTGTAAGTCGCTTAAGCAACGAAGAGGAACAGATCAGCACTGCGTCAACCTGGAATTATTAA
- Protein Sequence
- MQPTLPQTAGTADMDLTAVQSMDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLSTNIPNTDVCTDSAEHSSDLTAIVATATSPLLSTTAVAAAAAAAAATTTTTATTTVIDNNSSLDRATTINPPNTHLSPTILSHNNVNTHNSNSNKLLNTVAAAITLQQNGGNLLATTPSPSPPLSVTSSPTASQHTTTSQLKGCLNPKLFFNHAQQVMMMEAAAAAAAAAAAAAAVQQQQSPMHSPQPATQDDNEHEDSTVPQNIMNKEGDNFNATTTAATISDTTINVFASATANDSRNVPQEIGDQHSNGNKMDRDVDRILANRTDNENYLCCNISSNNNNNNNNNNSNTSNNNNNNSNNSNNNNNNGMISCSSNTINKINNSDNSAMSTNESHTENIANLSKESEAILSEDYNEKEEQLCPVKNINLSPSELLAAKDKEIEALFDEVKRLRAIEQTHLLQIRRLEEHLEAKRQHIMRLESHLDKQEKLYPLIEVSSPSESDSQILQMKNVSNPKETKTDDPKEIFHTEKNVETLDDDQTEDDECTKLTENISEIDIKKETQSPLSLDAISQQNAIAAAAAAAAACNNDPNKFQELLMERTKALVAAETLKSSDEIATDRIVQDITKPGDDVEQHVEATKVPKIEVDLDESAKNIENAGSLTKQLESFTNVPRSMKETCLLKSDVEKPSSTENDELSSANFKENVERFGSLLGEELVNSYWRRSFDITLNANASKSLYTNVANITQHQHQHQNQHHHQPQHQQQQNILLQQAVHQHNQLQQQQHRSHHHQHQQQQQQLLTHHQLQQQQQQQQQQQQQPQQGHSSTALLSQLVNSTFAQQTSTQTNSSILRSTDTLQHMPPNHQLPSHITDHHEKMGLNQQDSMSASSASTPNLQDQRSNDEHGLSLNGSHKSLDDNNSNLCATPTNPIGPHHLPHSFLPGLPFQFQDRGHFRFADELQLPPGTSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTMHISRRVRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWEKLTEKGRDSYRKMHAWSCDDNAVMLLKSLIPKKDSGLPPYGGRDDSMSDERIAHILNEASSMMKSSVSSGLQHQLKDEQQRRVHEDSHSNEDSKSPLQPCPSPFFKEQIKQTQDSCIQSQSNPHIRQEDVNPEKMARLYQEIMTRAPREAFPSFMLNPFFSGGLPAAAGMPGNTFSGLAADESMRLAFEREMVKLQQQAQPPNFPNFSSLMALQQQMLNGAQDLSLGKETAVKELKTNGQRNSFTSSQTSLENSGTVAQQNTTNAKESSTPSVERLYPGMCKSDTGNNTPASQPSANTPALNANSAAPSPLSNTILPPAMTSNDDFSTTASPLQRMASITNSLITQPPVPPHHPQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQIPQGLANKMQGTLPMQKMINDLKLQEPTQAQQIMQQMQAAAVMSAAMQQQHQAQQSQHQAVAQAAQAVAQAAQHHQSMLLTSPGLPPQHAIPLPAATTNPNSSVPTTASGPSGEKKPMIMPIHSPHTPNAMRNLHQHMSPTVYEMAALTQDLDTQVITTKIKEALLTNNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGPTPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGPPGAENPIPSRENTNSTPFDPVQFRILLQQRLLELHKERMGLTGTNPLPYPPYFAAAALLSRSLAGIPNATPAVPGIAGESEIHALNQAFKEQMSGLDLSMSSLKRERTDEFEDDLEEGHLSENDNDSLDEDDKSGDYKDTPRSSISSSDRFFGANMRSNKRKRAAPQWVNPAAVGLNATPTTESSDRLINGVCIMQSNQRTEPISDQNEEEIHKTQTSEDQEIVHSDIMEPEVVIKQEKADCESDSEQNSALTKSKEDKIKVMQDEKLRMVRVSRLSNEEEQISTASTWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749575;
- 90% Identity
- iTF_00749575;
- 80% Identity
- iTF_00749575;