Gpal002179.1
Basic Information
- Insect
- Glossina pallidipes
- Gene Symbol
- kn
- Assembly
- GCA_000688715.1
- Location
- Scaffold30:1083568-1096476[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-120 2.7e-116 389.3 0.0 205 385 1 209 1 211 0.99 2 2 2.5e-08 0.00024 19.6 13.1 422 503 212 303 208 319 0.60
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTTGTCATATCCACCCAAGTGAGCGTTGAGGGTCCATTGTTGGCCATTTCGGATAATATGTTCGTGCATAACAATTCAAAGCACGGCCGGAGGGCAAAACGTTTGGATACCACGGAAGGTACAGGCAATACTTCCCTGTCCATAACGGGACATCCCTTAGCGCCTGACAGTACCTATGATGGTTTATATCCGCCCTTGCCAGTGGCCACACCTTGCATTAAAGCCATTTCACCAAGTGAAGGTTGGACGACAGGTGGCGCCACCGTTATTATAGTGGGTGATAATTTCTTTGATGGCCTTCAAGTGGTGTTTGGCACCATGCTGGTATGGAGTGAGTTAATCACTTCTCATGCTATACGAGTTCAAACCCCGCCACGTCATATACCCGGTGTAGTTGAAGTCACTTTATCATACAAAAGTAAACAATTCTGCAAAGGATCACCCGGCCGCTTTGTCTACGTTTCCCTTAATGAACCGACAATTGATTATGGCTTTCAGCGATTACAAAAGTTAATACCACGTCATCCTGGCGATCCGGAAAAGTTACAAAAAGAAATTATTCTAAAAAGAGCAGCTGACTTAGTAGAAGCTTTATATTCAATGCCAAGATCGCCTGGTGGCTCGACTGGCTTTAACTCGTACGCCGGCCAGCTGGCTGTAAGTGTACAAGATGGTACCGGCCAGTGGACCGAAGATGACTATCAACGGGCACAATCGAGTAGCGTTAGTCCACGCGGTGGCTATTGTAGCAGTGCTTCCACACCCCACAGTTCAGGGGGTTCGTACGGTGCAACTACAACGGCAGTCGCCGCGGCCGCTTCAAATGGCTACGGACCAACACCCAACATGGGCACATTATCATCATCTCCAGGCAGTGTGTTTAATTCAACATCAATGTCCACTACCTGGCATCAGGCTTTGGTTCAAcatcatcatacgcatcctcatcactatcatcatcatcaCCAACCCTGGCATAATCCGGCAGCCGCAGCTACTGCAGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATTTAVAAAASNGYGPTPNMGTLSSSPGSVFNSTSMSTTWHQALVQHHHTHPHHYHHHHQPWHNPAAAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01132709;
- 90% Identity
- iTF_01132709;
- 80% Identity
- iTF_00749428;