Gpal012502.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina pallidipes
Gene Symbol
JARID2
Assembly
GCA_000688715.1
Location
Scaffold20:618529-629218[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-22 9.3e-19 67.7 0.0 6 89 1865 1946 1860 1946 0.92

Sequence Information

Coding Sequence
ATGGTGGTCTCGAAAGACTCTAAGCGTAAGCGCAAGGAGTCATCTCCGCCACCACAGCAACAATCATCCACAACTATAGAGTCATCACCAGAAATGCCCAAAAGAACCAAAGTGCAGGCTCAGCGTAAATTTGCACAGGGACAAAATGCACCCCAATCGTCGTATAATTCAATTCTAGCTTCATCGTCCTCCAATACGGGCCCAAGCACTTCATCTGAAAGCCGTGAACCTCCCACGGAAATCCTTCCTAATAAAAGACCAAAGACCGAAGATTTTTTAACATTTCTATGCTTTCGTGGAACATCGGCACTGCCGCCGCACTTAGACTTCCTGAATCAAGGGAAATCTAAAGAGCCGCCAAGACCAGTGaaaaagccaccaaataaaaaatctaataaaaaaggtaaaaaGGGAAGACCCCCGAAAACTGTTAAAGCAGATGATATCAAGGACACATCAACAGCTGaaaaaaaTATTACAGATGCGGAAAAAACGGAGATTGAGCTAAAAAACAGTGGGATCGCGATTAATAACTCCGGAGAAAGGGATAAAATTGAAGAAAAGATTGAAGAGAGAGTTGAAACTAATGATATACCAACTTTTGCTGTCCGCAAGCGTGCTGAAGTTGTTGCTGAGGGTAACAGAAGGAGCAACAACAATGTTGAATCTGAAAAGTGTAATAACTCTGCAGACACGACTTCAAGACGTTCCAATCGTTCCAGTTTACGGGAGGCTAAAGTAGTACTAGAACAGCTCCCAGATGATGTGGAAGAAGCTTTACAATGCTCGATTGCCGATGAAACTAGTAAACCCGAAAATTCTGATGATGAAAATAAAGAAGCAAAAACTTCAAAGTCCACATCAAAAAACGAAAGAAGTTCAGAAACTCCTTCCAAGGATAGTGATACCGCCGTTAAACTTCGCAAAGGGAAAACAACAGCCAATAATCAGAAAAAAGAAATAGAAACGAGAGATATTGGAAAGGCTAGTTCGAAAGCAGAGCCCAAGGAAAAAGTCGCCATAAAAAGACCCAGACAAAAGGAATCGCCAATTTTTATTCCATCTCCCGAACCGTCTGGACGTATGACACGGCAGAGGGCATTCTTTGAACCTGTGAAAGTGCCACCTAAAGAAAACAGCCAGATTAGTACTGTTAACGACGTTGAGAATTCTACTGACTCTCCCTCAAAAGAAAAGACAGATATAACAATCGAAGACGAAGCTAAAACGATAATTACaaaaaaagaagaaagtgcacagaaaaaaaccgtgcaaaatgaaaacgtactcgaagaaaaaatcgaaaaCACAAGCGCTTCGAACGTAGACGGTGTAGATAAAACCAAAGCAGATATGAATGTATTTGATTTTTCCTCAGAGGATGAACAGCCTTTAGCGAAAGCAATTAAATTTAAAAAAGTTGGAGTCAACAAAACTAATACAAGAAAGGGTCAACGTGGAAATAAAAAGTCTGCGTCCAAAAGAGCTGCAGCAACAAAGACGGACAAAAACGCAGACCGGTGCAAATCGAAAGAAAAAGAATCACAAAAAAGTGGTGCATTACAAGAGGAGCTCATTGAAGCCGAGAGAAATGAAGAACAAAAGGACGAGTCAGCAAAATTTAAAGGGAAGCGAGGTGCTTCGTTGAGTGTTGGAGGAAAAAATTCTAAGCAAAGAAGAGATGTTGAAGAACGTTTAGATGAAACTGATAAGGACGTGATACCTCAATCACCaaaaaaaCCAGCAAACATCAAGCAGGGCCGCAAGAAAACGAAAGCTGAAAATGAAAGCATAGGTGAACTTGAGACCGACGACAATCCAAATAGTCCACCGGTCCGAAATCAGCGCCCTTCTAGAAAAACAAAAGAGGCTGCTACTATCTACATGGGTATTATAGGCCATCGTCTTCAACTTGGCGATGATGAAGACGATGATATATCGTTAAGCAGTTTTGATCGTCCTAATGTTCGTGAAATGGAGAAAATGGAGAACGAACTAAAACGAAATATTACTGCCTTAAGTAAGCACAGCAGCACATCACCGATACCAGCAGGCAAACAGATGCAATTACCCGAAGAGTCGCCACCGCCTGCAGCATCAACAATAAACGTTGAAAAACCTTGTGTCGGACGTCGAGGCCGCCCACCTAAAAGCCAAAAGCAGATGGCAGCTCCTCCTGCCAAACGCGAAATAGAAGGTATGCTTGTAAAGAAGGGTGTACTAACCAAAATTACCCAACAGACAGAGAGTACTTCAGAAATGAAAGAAGGAAAAACTGAACAGTCAAAGACTGGTACGGAAGAGGATGAAGATTTCCTTTTAAACGAAGAACTTAATGAAACCAAACGCAAACTTGAAAAAAGTTTTAGCGATTCGGATGATGAACCTTTGGCAATAAAGGCCAACGCGAAAACAAGTGATAAAGATGTAAGCGAACAAGTAGAGAATGCAGTCCCTGCAATTCCTGCGCCCGTTCCATCTACATCAGACATTAAAACTCTCACTATGTTACCTCTAACAACAAAGCCTATTACTACAGTACCAACACCCCCACCTCCTACAACTACATTGACGACAACAACTTCATCTTTTGGAGTCACAAATGCGGTAACTTCTCCAACAACATCTAGTGTCTTTCCTCCAGCGCCTGTAACGCCCTCATCGCAAACACCGTCGCCATTTAAAGTTGTTGaaaaaaaGTCACCTGTTCCAACATCAAAAATTTTGAATGTTCCGGCCACATACGGCATTCCTTCTGCTTCGCCTACAGGCAATTTGGGTGCAGCCATCAATAACAGTTTCGGTAAAACATCAATGTATGTCCCTCAGTCACCGGCACACTATCATTCTCATACATCGCATATACGATCACAGTATCCAGGTCAGAGCACAAAGTCGCCAGTTATGCCGCCCGCCTCATCTGCGACGGCCTCTCATCTCACCACATCTCCCCAATTAAATGCACAATCACCGTTAAAATATCAAACTCCACCAACAACATATCCACCTCCCATTGAGGCATATCCTTCACCGAAGATTAATCCGAACTTTTTAACGCCAAAATTCGACCGAAACACTTTGCCTCGACCCACCAACTTAACCGGTAATCATAATTCTTTTCCTTCACCATCTCCAGTTAAATTCGATATGTCGGGATCAAGCAGTGGGCTATTAAAAAATTCATCACTGTCGCAGGCTAATGTTACAGCGAGTTCCAAAACGTTATATACTGCTAATGTGGGCAATAACATAGCTGGTGCTTCAACCTCTGCGACAGCTGCAGCAAATCAATCTGGTAACGATCCACTTAAGGATGAAATCGGTAGCATCCTTGCCGCAAATTTAATGCCGAGTAAAGAAGAGTCTGGAAAAATATTCGGAATTGCTAGTGTTAGCTTAGCTCAAAGTTCCGGTCCAGATAACACAAAGTGCACCTTGGGCAAGTGTGGGTCAATACATAAGCCCGTTCTGGGCCCAGTAGTGCCTACAGAAAGCTACATTGGTGATCAATTATCAGGTAAAGAACGACGTAAAGCTAAAGTGAATATGACTCATGAACAAATCCATAAATGGCTGATTGAATGCTCTTCGAATCCGGATGAAATTCAAGACGATCTGGAAGATGACTTCGATTCGGATCTAAGGCCAAATAATTACAGCACAACGCCACCTCCAACACGAGACGACAAAGAAAGTACTTCATTTAGCTCGTCGTCGAAGGCCACTCGTGATCTTGGTAAGAGTGAAAGTGCATGGTCTGCAAAAGGCCCCTCATTGAAGGCAACTCCTGTTGTTGCTTCCAGCAGCAGCGCCAATAACCGCAAAGATGATTTAAAACTAATTGAGCCAACAAGTCCACCAGACGATGATCTAGATAAAGCATCGCCAATAATGAATTTGGCACGCGAAAAAACGGCTGAAAATAAGCAAACACCCTCCCCAACAAGCATTgaagaaaagtcgctgaaaatcgaaacaagaaagaatgataaaaaattaaaggaagagaaatCTGCGTCGAAAGAACCCGCAAAACAAGCTGAAATGGATTCACCACAACCCAAATCTAGTAGCATGATCAGTAAACAAGCGACCGGACACAAAGTTGCAAATCAAAAGAAGTTGGAATCTCCGATTACTACAACAACAGCTGCACCAAACAAATCGAATCGTaaaaaaaTATCAATAGATACCATTAACGAAAAGCCAATTAACTCCGGAATACATGATGTGTCAATAAATATTGCAGACAATATGGCATCAAACACTGCAAATCGAACACCAAAACGTACGCCAGTCTATCAGCAAAAGCAAGTATCCAAACAACAACGTTCAGAGTTTAAAGAAACAACTACCACCAGTCATAAAAAATCGGCTCCATTCTCATACGGAGGCGCTTTTTCAGCCGACAACGAAAAATCGATATACTCTTTTGACAAGGATGATGTCGATGACGTTGAGTCTAACAAACCCACCACTTATCGCCGGCAAAGTAGAAGAGATTCGCAACAAGCGGAAGCAGGAAATGGTGGTAACACTACACCAACCACTAGTCAACGCACATCACCATCAAAGAAGAGAACTGCGGCAGCCGTAGAAAAAGCAAATAAAGATTTAGCAAATGCTTCACAAGCAAGCTCGGTCTCTTTGACGCTGAGTCCGACTGAAAAAAGTAAACTTGTTAAAGTTAGTTTGGATACCGAAGCAGTGTTACCGGTAAAGCCAGCAACTAACAAGTCTGGGAAAGGTACCAAGAAAACTGTTGAAACGATTGCGCCTACAAATGACGCGGATTCAGATTCTGCTGATGGACACACATTCTATATTCCGTTACAAGGCATTGGAACAAGTGGTGACGGCGAAGGTGGCATTCAGGGTGTAGCAGTCAAATTGGGACGTGAGGGTCCAGATGGTCCCAATCAGAAAGTGATCATGCATGCGACTTTAGTCACAAAGGCGCAAATGGGCGCTAACTCTAAACCGTTGCCCGAATCGATGAACGTTTCAGACATTGTAAAAAATCTAATGAGTGGCGGTGATAAGAAAACTGCAACAGCTACAAATGTTGGAACAACAGTATCAACGAACTCTGCGCCAAACAGCTTGAAGAACGTGCCAGTAGGCACTGTGCAGCCTCGGTTTAAAGGAGACGCTTCTAATCAGGGACCCTCTACGTCGACTGCTGGCGGCGGTTTAGTACGTGTAAATTCCAATTCATCTCTTTTTTCGGGATCAGTCAAATCCCGTAATGCTACTGCACCTTCAGGTGCACCTGTAACATCACATGGCACCAATAAGAAGTTAAAAGACGATACACCTATTAAAATGGCGAACAATACTGCTTTTCCGCGCCATGATGATCCCACACAAATGGTAGAAGCTCCCATTTTCCGGCCTACCGATAAAGAATTCTCAGATCCAATTGAATTTATCGAACGCATTACACCAATTGCAGCACGCTTTGGCATTTGTAAAATAATACCACCAGCCAGTTTTAAACCAGAGTGTCGCATATCGGATGAAATGCGTTTCACTGCCTACAATCAATACGTGCATAAAATGTTACATCGTTGGGGTCCTAGTGCCAAGGAACTGAGTGCAATCAAAAAGTATTTAGCCACCCAAAGCATTGTCATGAATCATCCGCCATGGATTGGCGGCATGGAAGTAGATCTGCCACGTCTATATCATACTGTGCAAGAATTGGGTGGTTTGAAAGAAGTGATTGAAAAGAAGAAATGGGCTCGTGTAGCTGAAGAGATGTGTATTCCGAAATTAGCTCAGGATCGCGTCACAAAATTGGATGACATTTATTGCAAATATTTGCTGCCGTATGATACCCTATCTCCCACTGAACGTCAGAAGCTTTTCGACGAAGTTGAAGCCGATTGGGCGAAGCGAGAAGCTCGAGCCAGACGTAATGCTGATAGGTTTGTGAATACGGAGAGCGTTTCGAATGAAGAGGACGATATAACTAGTGAGAATGACGAAGAGGAGTCGGAAGAGGAAGTAGATGGTGTCTCAATGGAATGCATTGTTAAAGGTCGCAGTATGCCTTTAAGTCAGTTTTATCGCATCGCCCGCAATACCATGGCGCTGTGGTTCAAGAATACCGAGCCCACTGTCAATGAAGTTGAGGCGGAGTTTTGGAGGCATGTTGCTGTCAGAGACAGCCATGTATGTGTACATTCCGGTTCAATTGATTCTTCAGGTTGGGGTTTCGGATTTCCTAGTCCTGGTCCAAAAGGTAAGGGCTCCAATTACGCTCGTCATCCATGGAACCTAAAAGTGATGACCAATAATCCCGGATCTGTACTACGTTCGTTGGGACCTGTGATGGGTGTGACCGTGCCAACACTGCATGTAGGAATGTTATTCTCTGCCTGCTGCTGGTATCGTGACCCTCACGGGCTATCATGGATTGAATACCTGCACACAGGCGCGTCAAAATTATGGTATGGGATACCGGACGATCAAAGTGCTAACTTCAGAGCCGCCTTGACTTCACTCATTCCTACGCATTGTCAAAACAAAACTATTTGGCTGCCTTGTGATACCGTAATGGTGCCGCCCCATATGCTTACTGATCGCGGGGTATCTCTCTGTCGTATTGAACAAAAGCCAGGAGAGTTTATTGTTGTTTTTCCACGAGCATATACCTCAAGTTTGGCGACCGGATATGTCGTATCAGAAAGTGTATATTTCGCCACATCTTCGTGGTTAGATCTCGCAAAAGACGATTTCCGAGACATACACGACAGTTGTGAGCCGGCGATGTTTTCTTTGGAGCAATTGTTATTTGCCTTAGGCTATGATCAACGGGTGCAACCAGATACCTTACAACAAATGTTGCCCATGCTGCAAGAGGTATATGAGAAAGAGACGGCCGCACGAGAACAGCTTAAGGCGGCTGGGGTTACTTCAACGGaaaaagttaccaatgaaaaaagcggaaaaagtaaaaaaCAGCAGCAGCCACCATATAAATCAATCGAAAGCGAATGCGATCTCTGTCGTGCCAATCTCTACATTTCGATGGTGCGTACCGATGAAGGTAACGTCTATTGCTTGCAACATGCTCTAAAAAATCTTAACAACGGTAACATACAGGCTAAAAAGTGTAAATTAATCTATGCGTACAATGTCGATGACATTGAAAATCTCATcaaaaatcttaaagataaaatacaacaaaaacgcaatactagcgctggtaaaaaacaaaaatag
Protein Sequence
MVVSKDSKRKRKESSPPPQQQSSTTIESSPEMPKRTKVQAQRKFAQGQNAPQSSYNSILASSSSNTGPSTSSESREPPTEILPNKRPKTEDFLTFLCFRGTSALPPHLDFLNQGKSKEPPRPVKKPPNKKSNKKGKKGRPPKTVKADDIKDTSTAEKNITDAEKTEIELKNSGIAINNSGERDKIEEKIEERVETNDIPTFAVRKRAEVVAEGNRRSNNNVESEKCNNSADTTSRRSNRSSLREAKVVLEQLPDDVEEALQCSIADETSKPENSDDENKEAKTSKSTSKNERSSETPSKDSDTAVKLRKGKTTANNQKKEIETRDIGKASSKAEPKEKVAIKRPRQKESPIFIPSPEPSGRMTRQRAFFEPVKVPPKENSQISTVNDVENSTDSPSKEKTDITIEDEAKTIITKKEESAQKKTVQNENVLEEKIENTSASNVDGVDKTKADMNVFDFSSEDEQPLAKAIKFKKVGVNKTNTRKGQRGNKKSASKRAAATKTDKNADRCKSKEKESQKSGALQEELIEAERNEEQKDESAKFKGKRGASLSVGGKNSKQRRDVEERLDETDKDVIPQSPKKPANIKQGRKKTKAENESIGELETDDNPNSPPVRNQRPSRKTKEAATIYMGIIGHRLQLGDDEDDDISLSSFDRPNVREMEKMENELKRNITALSKHSSTSPIPAGKQMQLPEESPPPAASTINVEKPCVGRRGRPPKSQKQMAAPPAKREIEGMLVKKGVLTKITQQTESTSEMKEGKTEQSKTGTEEDEDFLLNEELNETKRKLEKSFSDSDDEPLAIKANAKTSDKDVSEQVENAVPAIPAPVPSTSDIKTLTMLPLTTKPITTVPTPPPPTTTLTTTTSSFGVTNAVTSPTTSSVFPPAPVTPSSQTPSPFKVVEKKSPVPTSKILNVPATYGIPSASPTGNLGAAINNSFGKTSMYVPQSPAHYHSHTSHIRSQYPGQSTKSPVMPPASSATASHLTTSPQLNAQSPLKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNTLPRPTNLTGNHNSFPSPSPVKFDMSGSSSGLLKNSSLSQANVTASSKTLYTANVGNNIAGASTSATAAANQSGNDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYIGDQLSGKERRKAKVNMTHEQIHKWLIECSSNPDEIQDDLEDDFDSDLRPNNYSTTPPPTRDDKESTSFSSSSKATRDLGKSESAWSAKGPSLKATPVVASSSSANNRKDDLKLIEPTSPPDDDLDKASPIMNLAREKTAENKQTPSPTSIEEKSLKIETRKNDKKLKEEKSASKEPAKQAEMDSPQPKSSSMISKQATGHKVANQKKLESPITTTTAAPNKSNRKKISIDTINEKPINSGIHDVSINIADNMASNTANRTPKRTPVYQQKQVSKQQRSEFKETTTTSHKKSAPFSYGGAFSADNEKSIYSFDKDDVDDVESNKPTTYRRQSRRDSQQAEAGNGGNTTPTTSQRTSPSKKRTAAAVEKANKDLANASQASSVSLTLSPTEKSKLVKVSLDTEAVLPVKPATNKSGKGTKKTVETIAPTNDADSDSADGHTFYIPLQGIGTSGDGEGGIQGVAVKLGREGPDGPNQKVIMHATLVTKAQMGANSKPLPESMNVSDIVKNLMSGGDKKTATATNVGTTVSTNSAPNSLKNVPVGTVQPRFKGDASNQGPSTSTAGGGLVRVNSNSSLFSGSVKSRNATAPSGAPVTSHGTNKKLKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTDKEFSDPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPTERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDITSENDEEESEEEVDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGFGFPSPGPKGKGSNYARHPWNLKVMTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATSSWLDLAKDDFRDIHDSCEPAMFSLEQLLFALGYDQRVQPDTLQQMLPMLQEVYEKETAAREQLKAAGVTSTEKVTNEKSGKSKKQQQPPYKSIESECDLCRANLYISMVRTDEGNVYCLQHALKNLNNGNIQAKKCKLIYAYNVDDIENLIKNLKDKIQQKRNTSAGKKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00748003;
90% Identity
iTF_00748003;
80% Identity
-