Gmor000134.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glossina morsitans
Gene Symbol
-
Assembly
None
Location
scf7180000648803:265296-272427[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 1.6 86 3.4 1.8 1 23 223 246 223 246 0.91
2 8 0.00017 0.0095 15.8 1.0 1 23 594 616 594 616 0.97
3 8 0.0016 0.085 12.8 0.9 1 23 622 644 622 644 0.97
4 8 9.2e-05 0.005 16.7 1.5 1 23 650 672 650 672 0.99
5 8 5.3e-08 2.9e-06 26.9 0.2 1 23 678 700 678 700 0.99
6 8 1.6e-05 0.00085 19.1 1.9 1 23 706 728 706 728 0.97
7 8 7.6e-05 0.0042 17.0 2.0 1 23 736 758 736 758 0.99
8 8 2.7e-05 0.0015 18.4 0.7 1 23 764 787 764 787 0.97

Sequence Information

Coding Sequence
ATGATCAATACTTTATTAGAGCATGTGCCCATCAAAATGGAAACTAAAGACACACCAGCATTAAAAATAGTGGCAGCGAAAGAATTAACCGAAGGCCAAAAAAGTTCGGTGGCTGCACCCAGCATTCCCTTGACAATGACCGGtgaagatgatgacgtagaaaatttggatgaagaagaggatgaagatgatgaggaagatgatACGGAAAGTGATGTCTTAGAGGAGGATGAGGCTACTTTGATAATTAGTAGCGATGAAGAAGCCGAATTGGAGGCGCAACGTATACGTTTTGAGGAAATATTGAATAAAAATATTTTACAAAGCACAAAAGATCCAACAAAAAGACTGAGCAGGCGCAGCGATTCCAACACAAATGTATTTACAAATGAAGAGAACGAGAAGCAGCTACAAAAGGAACAAAACAAAGCAGACAATCAATTAAGTGAAGAAAATAAAATTACTGAAAATAAGGCAACAGAACCCATTGTCAAAACAACAGATACAAATACAAGCACAGTTAATAATGATGACAAAAACAATGAAATGCATAAAAGATTAAGTACTAACGCCATTTCCAGTGTAACCCCCGATTTGGCAACAGGGTCCAATGGCTCTGAATCCTGCGGCCTTGTATATTTATATCGTTCACAGCAAAAGTTAATATTTAATTGCAAAACCTGTCAACTGTCCTATGGGGATTTGGAAAGATTTGGACGACATTTACACGAAAGCCACCAACTTTTCACATTAGACTGTGATGAACAAGAAAAAGAGAATTCGCCACGTAATTTGCACGCTTCCAAGACAAATCCTAATGTGAAAAAAGAACCTTTGCCTACTAATGGACAAAGAATTGCTGCCCTGCCCGAAATTAATGAACCTTTAGAAGCCTGCGGTAATATTTGCGTTTTAAATCGTTGCAAACTGTTGCTGAATTGCATTTCGTGTGAGTGTAAATATGATAAAACGGATTTGCTCGAAAATCACTTACGACAACAGCATCATTTGTTTGACAGTCCATCGCCACCTTCTGTTGCTACTACGGCTGGTCCCAAAATGGAAATGCAGGAGGAAGTCTTTATTATTACAGAAGTCGTGGAGTCACCTACTTTCATTTTGCCCGACGCTGTCGTAATGTTGCCCACGGAAGGTGACATAAATATGGACACTGTCGAAGTGATTACAAATCTTAGGCTGGAGGACGCTGAAGTTATTCAGACGTCGACACATGATCATATTGaaaaaaaaGAGGAAGAGAATGGAAATGTTGAAAAAAGTAAATCAATACTGTCTAAAAATTTAGCAAAACGACGGGGTCGGGGTCGACCACCTAAGGGAGGAAAATCCTTGAAAGCGCCCATGAAGTCGAAGATAGCTGCGATTAGCAAAAAAGAACCTAAAAATCTTCAGCAAACTTTAAGACGTTTATTGGAAGAGACAGAGGAAGACAATCAAAAAGTATCAAAACCAAAACCCATTGGAACCAAACGCGGACGTAAAACTAGTAAGACGCAGAAAAGTAATGAAACAAAGCCAGAGGCGTTCGACGGAGCTGCGAAAGATAAAAACGTTGAAACGGTAACAGAACCTAAATCTGCAACAGCCACTGATTCAACATTAGATAAGGATGTGGCAGCAGCTGAGGATGCGGGTTCGGTTAATGAGGTCATAACACTAATTTATAACTCGTTGACAGATGGGACGCGAGAAGAATCTGCTGCTGGTACTTATATATTACCCCATGAGATTGTACCGCCTGAAAGTGCACCAAAACGTTTTCCTTGTGATCAATGTGAACGCTCTTTCAATAAATCGTCACGTCTTATTGAACATAAGCGATTGCATACGGGTGAGAAACCGTTTGCTTGCGACGAATGTCCCAAACGTTTTCGGATTAAAATGCGACTGAATGAGCATAAGATGCGTCATCGGGTGGATAAAAAGTATAAATGTGAGGTCTGTAATTTAGGTTTGTCCACAAAGCAAGATTTAACTTTGCATATGCGTCATCATGCTGGCGATCGTCGCTATCAATGTACAGAATGTCCGAAAGCATTTGTACGCAGCTCAGATTTAAAAATTCATGTACGAATACACACAGGCGAGAAACCGTTTGCCTGTGATATTTGCAATAAATGCTTTAGAGCCAATCAAAATCTAATCGTACACAAACGCTCTCACATGGGCGATGACTGCAAAACTTATCAATGCGATCGTTGCGAGAAACGATTCATGCGCAATATTGATCGTAAAGTTCATATGCGTACCCATACGGGCGAGAAGCCTTATAAGTGTGAAATATGCCAGAAACCTTACTCATCGCGCGTTCATGTCCGCGCACATATTGAAAGGGAACATTGCACTATCGAGGAGGGTCAGGCTAAGAAAGTGAAAAAGAAGAGAGGTCCAAAACCGAAAGCTTTGCATGAAGAATTGGAAAAGCAAAAGAAACTTATCGAAGAGCTTCAGGCGCAACTGCAAGCACAAATGAAACATGATGAACCCTTGATTATAGAAGCAGATGCAGATATTTGCGACAATGCTATAAATAAGCCAGAACCATCCAGTACACCGAATTCTCCTCCCATTTTAAGTGATACATCCGGTGTAAAAGGTAATAATGCTGCAGCCGTCTTACCGCCGCTAACTATAACACAAAAAATTGATCAACATTCCCCCAACTCACCACCGAAAGTAGTAAATCAGAAAACTTCACTAGGTATACAGCAGGTCTCCGTCACCGTATCTATGCAAGTGGAGAATGTGCCGCAAACGACAACGTCTATGGAAAAAGAAAATGCGTCTAAAATGAATTTAAATACACCAACACCAACGACTGTTAAAAAAGAACGAAAGATCACCAGCTATTTCACAGTCATAGGCCAAAAGAGTAATGTTTGA
Protein Sequence
MINTLLEHVPIKMETKDTPALKIVAAKELTEGQKSSVAAPSIPLTMTGEDDDVENLDEEEDEDDEEDDTESDVLEEDEATLIISSDEEAELEAQRIRFEEILNKNILQSTKDPTKRLSRRSDSNTNVFTNEENEKQLQKEQNKADNQLSEENKITENKATEPIVKTTDTNTSTVNNDDKNNEMHKRLSTNAISSVTPDLATGSNGSESCGLVYLYRSQQKLIFNCKTCQLSYGDLERFGRHLHESHQLFTLDCDEQEKENSPRNLHASKTNPNVKKEPLPTNGQRIAALPEINEPLEACGNICVLNRCKLLLNCISCECKYDKTDLLENHLRQQHHLFDSPSPPSVATTAGPKMEMQEEVFIITEVVESPTFILPDAVVMLPTEGDINMDTVEVITNLRLEDAEVIQTSTHDHIEKKEEENGNVEKSKSILSKNLAKRRGRGRPPKGGKSLKAPMKSKIAAISKKEPKNLQQTLRRLLEETEEDNQKVSKPKPIGTKRGRKTSKTQKSNETKPEAFDGAAKDKNVETVTEPKSATATDSTLDKDVAAAEDAGSVNEVITLIYNSLTDGTREESAAGTYILPHEIVPPESAPKRFPCDQCERSFNKSSRLIEHKRLHTGEKPFACDECPKRFRIKMRLNEHKMRHRVDKKYKCEVCNLGLSTKQDLTLHMRHHAGDRRYQCTECPKAFVRSSDLKIHVRIHTGEKPFACDICNKCFRANQNLIVHKRSHMGDDCKTYQCDRCEKRFMRNIDRKVHMRTHTGEKPYKCEICQKPYSSRVHVRAHIEREHCTIEEGQAKKVKKKRGPKPKALHEELEKQKKLIEELQAQLQAQMKHDEPLIIEADADICDNAINKPEPSSTPNSPPILSDTSGVKGNNAAAVLPPLTITQKIDQHSPNSPPKVVNQKTSLGIQQVSVTVSMQVENVPQTTTSMEKENASKMNLNTPTPTTVKKERKITSYFTVIGQKSNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747699;
90% Identity
iTF_00748465;
80% Identity
-