Basic Information

Insect: Glossina morsitans
Gene Symbol: -
Assembly: None
Location: scf7180000642671:166067-184255[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.2 68 3.7 0.2 1 23 1750 1773 1750 1773 0.93

2 12 0.37 20 5.4 3.0 1 23 1946 1968 1946 1968 0.92

3 12 0.00032 0.017 15.0 2.2 2 23 1971 1992 1971 1992 0.96

4 12 6.8e-05 0.0037 17.1 0.2 3 23 2000 2020 1998 2020 0.98

5 12 2.8e-06 0.00015 21.5 5.8 2 23 2027 2048 2026 2048 0.97

6 12 5.6 3.1e+02 1.6 0.1 5 23 2062 2080 2061 2080 0.96

7 12 0.0009 0.049 13.6 0.2 2 23 2119 2139 2118 2139 0.97

8 12 5.1e-05 0.0028 17.5 0.6 1 19 2145 2163 2145 2167 0.95

9 12 2.9e-05 0.0016 18.3 1.7 1 23 2175 2197 2175 2197 0.98

10 12 0.00012 0.0064 16.4 6.5 1 23 2203 2225 2203 2226 0.96

11 12 6.1e-05 0.0033 17.3 6.1 1 23 2231 2253 2231 2253 0.98

12 12 0.00053 0.029 14.3 6.2 1 23 2259 2281 2259 2282 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.2	68	3.7	0.2	1	23	1750	1773	1750	1773	0.93
2	12	0.37	20	5.4	3.0	1	23	1946	1968	1946	1968	0.92
3	12	0.00032	0.017	15.0	2.2	2	23	1971	1992	1971	1992	0.96
4	12	6.8e-05	0.0037	17.1	0.2	3	23	2000	2020	1998	2020	0.98
5	12	2.8e-06	0.00015	21.5	5.8	2	23	2027	2048	2026	2048	0.97
6	12	5.6	3.1e+02	1.6	0.1	5	23	2062	2080	2061	2080	0.96
7	12	0.0009	0.049	13.6	0.2	2	23	2119	2139	2118	2139	0.97
8	12	5.1e-05	0.0028	17.5	0.6	1	19	2145	2163	2145	2167	0.95
9	12	2.9e-05	0.0016	18.3	1.7	1	23	2175	2197	2175	2197	0.98
10	12	0.00012	0.0064	16.4	6.5	1	23	2203	2225	2203	2226	0.96
11	12	6.1e-05	0.0033	17.3	6.1	1	23	2231	2253	2231	2253	0.98
12	12	0.00053	0.029	14.3	6.2	1	23	2259	2281	2259	2282	0.96

Sequence Information

Coding Sequence: ATGGTGAAGAACATACAGTGCCCCGTTTGCACGCTTTACCTGCACGCAGGTATGAATCTATGTGATCATTTGGAAACACATCCCAAAGAGCAGGTAATTAAGGCTCTGGTCGAAATGACAATATCTGGAAATGAAAATCGTTTGCTGACTACTCAGTTAATGGAAGAAACTAAGAATATAAGAGAGAAAGAGAGAAACTCTGCCGAAATTGCGAACAACCATTCTCCACCGATTAAAGATCATGACGTGAGCAGTAATTGCAGTATCTCTGCCAGTATTAGTTCGTTATCAAATCAAAGTTCAAATCATACACACACCACTTTATCTAACGCTATCAACTTTGGTGAAAGTAATGCGACAGATGGATGTTCTACTTTCTCATTGACTTCTTCCAAAACGGCAATAAAATTTAATTCGGATTCTGGCAGTGACCTTAAAAATCCATTAGCCGAGCCTCCTGGTGAGGCAAGCGGCGAATTTATAAAGCAAACTTTTAATCAATCTTCAAATACGAATATCAATCAAGTGTATCAATCCCAAACGACAACTGTGTTGTCTAATGTGCCGACTGATTTTTCAATATTTGGTAGCCAACGGTATCAACATGCGCCATTGCCAAGTCAGCCGAATAGCGGGCAAAGTAGTACCACTGGTCACTTACATGCTCCCACTCAGCTGGTATCTTCTCAGCATCATGTTCAATATCAGGAATATACACGTGGCAGCTTACCGCAAAACAGCCCAACGCAACTGCCTATATTACGTGCAGAGTCAATATCCTCAGGGACTGTTCCATATCATAGCCAACAAAAACAACAATCACCCAGTGAATTGCCGATGCCAATGCAATTAAATACTGTTTCAAACAGTCAACGTCAGCCGCAGATGTATCCTAGCcatcatcatcaacaagaacagcagcaccaaccacaaccgcaacaacaaccacaacaacaaccacaacaacaacagcaagaacaacagcatcatcagcaacagcagcaacaacgacaacagcagcagcaaccacaacaacaacagcagcagcagccgcagcagcagcaacaatcgcttgctcagcaccaccatcaaaggcaacagcctcaGATTTTCCCAGCGGAATTACCTCCCCCACCGCCTTTACAGCTGTTTGCTTATCAATCGACTGTTCCACCACAATATCAGAAACCCCCACCGGCCTATGGCACAGCAATTAGTCAAATTCGATCTCAAAGTAAACAAaataagtatcaacagagctcaactgtatcacagctgcatcatcaacaacagcagcagcagcagcagcagcagcagttgcagttgcagcaacaaacttcaccggtaccaTCTTCACATAGTTTGCAACAGTCATCACAACATTTGTCCCTTGAAAGTCCAAGTCAAAATCAAAATGTTCAACGTCAGCTCTTCAATTTCTCTCACATTCAGCAGCAAAGCCTAAATTCCATCGCTCAGCATCTAGCAACACCGTCCAAGAGGCAAATACTTTCCTTAAAAACGGAAACAAAAAACGGAACACCAACTCCATCTCCAGTGATACGATCGCAGCATTCGTTACCGCAAGATAAACATTTGGCTGATCAACAAACAAACGATTCTAATGGAAGCCATGCAAAACCTGGTGGTGGATTATACACTACATCGAATTCATCGACAAGCGCCCAACCATCGTTATCGACTACTACTTCTGCAAGCAATGCTGGGAATTCTATATTCGGTCGAAGCCCACTTATACCATATCCTATTTTGTTATCGTCTGCTACTTCGACACTTGCTTCGTCGGCGACTTCTGTGTTACGATATGCTGAATCGCCCGTTGCTCATTACCTTGAACGCGAAAATGGTGACTTTATTGTTCAAGAAACGCCGAAGCACGTAATGGAATATGTTGAAGAAGAAGACGGCGAATTCTCCGTCATTGAGCGCATCTATCAATCACCTCCTAGTGTTCTTCATATTCATGACGAAGACGACGTTGATGGAGATGTCAGTAGCAAAGAAGTGCTATCTCCTAAAGTTAGTGGAAAGAAATCCAAATCTTTTGATAATGAACAAAAATCTGAGAAAGTTGATAATTCTGATAACGAAGAAGATTTCATGAGTATTTCAGGGGAAAGTGACCAGGAAGAGTTTGTGGCGAGTAATCATCCAAAAAGTAAGAAACCCGACATTGATTCCATGTCCAAGCAATCAGATGTGAGTTTAACTAATGAAACAGAAACGCTGTCGATTTCAAAAATAACTCCATCGACGAATGCAAGTAGTCCTCTCAGTCAGGATTCAATACGTAAAAAATCACCCAAAAATACTATCACAGTGTTAAGTGACGTTCAGTTAAATTTAAACGAATACTTGGATTTAGTGGGCAACATCATAGCTTCTAGCAAGATATCTCCTCAACGAAAAACTCTTTCGGCCATAGCACCGGTACCTTTAGTAAAAATTGAAAAGGAAGAACCATTAGACGACGATGAGGACCAAATACAAGAAAATCCAACGGATGAAGGCACATCTGCTAAACCACCACTGAAAGCCGACAAACATGAGACTGAAAAACCAACTGACACCTCAATTCAACCCACTGAGGAAGATGAGAAGAAACCCGACATTTTCGAATGCAATATTGAAAGTGACAATAGCAAATGCGGCACACCATATTCCAGTAATTGTTCTGGCCACGCAACTAGCGTAATACGCATGGCAACAACTTCTACTAGTCAGCAGATGCAACAAACAAGCCATGTAAACGAAGGTCTGTTGGAGGACGGGCTACTAGTGAAGCAGAAGGAAAAGGAGACTGTATATGCAGATAAAGAACCAAAAAGTATTACCATACGAAGAGACTCAGATAGAGCTGAGGATCTCTCAAAACCGCAGCCCAAAATTCAACATAATCTGACGGGTTTCACTTCAGACTATTTAAGGAAACCTTTTGCTACTGCCATAGGACGTAAGGTTCCTAAAAAGTTAGTTATCAAGCCCAAATCCTCAAAGACTGAAATATCGGCAACAAATGCTTGCGCATCCTCACCGACGGGTGACGATCAAAAACCCTCAACTTCAGCCAAAGCTCAAGAAGAATATGCTAAACTTAAACAACGAATATCAACTGACAGCTCTAATGAAACAACGCCTTTAGTGCAACAAAAAGATATGTTGTTTGCACAGTTGGATGAAAATTATAAAGAAAGAAATCGTTGTAATAAAACGGCAGATTGTGATAAACTACAGTTGAAAACTTCGCGCGAATTTGACTACATTGACGATAATGAACGTGAGCAGTTATCTGTTGCAGAGAAATTTTCGAACTTAAGTAAAACTACGACAATAATTGAGAAAGAAATCAATAAGTCTTATGCATCAGCAGAAAAATGCAAAAGGCTAGAGGAATTGCATCAACACGTTATAATGGATAAGAGATCCAATGAGCGGCCAACAGCTACAGCAAATCATTCTTCAAATTTGACGCCAACGCAAGATGATCGTGAGAAACGAGTGAAGAAAAATTTGGAATTAATATCATTTAGAGAGCATGGAGAAGCTCTAAAACAAAAACAACGGACGATTATTGAGGATATAGTGAAAGTGAAAAGTGAGCCTTTAAGCGGTGGAAACTATGAAAATCAATTGCCAGAAACCGACTTGAATATCGTGGATCAGCAGCTCGAGTGTACTTCTGCACACACCGTAATGGAGTGCAAAGAGGAGAAACCCTGTCTTACGGAAACTTGTCTACCATCAAGTACTCCGCACTTAAAAACCGAAAGTAACATTGCCGACGACGCTCGAGTCTTATATGATTTTGCCAATTCAAAGAAAGTCACCGCGACTGAAACATCAAGAAAAGAATTTTTATCATCCTCCGTGACTTTTTCAAAACAGAAAATGCAGGATTTCCCAAACAGTTCACATATTGGTTTTAGCTCCGCTCAATCCGAAAAGGAGAATAAATCCGAAATGGTTGTTATAAACTCTTCCTATTCTTCAGAATCCGCCGTTGACGTTAATTTACAGAACTCTTCATTTCCGCAAAGTTCTTCTGTGCTTCCGTTCAATAACGCTCAACCAAACCAAGCGCAAAATTATATCGACTATCCCTTCGGATTTCTATACAATAGCAACAACAGCAATAATAATCACGTGTCACAACAAGAGGATATTAAACGTTCTCAAACCTTTTATTCAAATATGACACACAGCGTTTCAGTCTCAAATAGTAGTAATTCGAATTTGCTCGAAGATAGTTCCACTACAAAACAGGATCAGAGTCTTACGTCTAATCAGCAGCATAATCAAAATCGAAATGTGGCGGAATGGTTTAATAGCACCGATGCGAATAATACTTCATCGGTCTCTACGGCGGTCACCAGCAATATTGAAGTTAGTTTTAATTCGCCTTTGTCGGTTGATTGCAATGCATCCCTCGATGGCGGCGACGTTAGTAAATATTTAGATTTAGATGCTTGCAAACGGGAACAGAACTTCGATATAATAGATAGCAGCAGAAGCCAAAATCCGCCTCAGCCACCTCCTTCCTCGCCAAATTCATGTTCGTTTGCTGGAGCTACTGACAATAGTTTAAGTGGCGTTTGCCCTGTATCTGCTGCTCTTAACATACGAACTGATGAGAAAATGCCTGCCAAGGGCGAAATCTCTGAACAGGAAAGCAATTGTGATATAGAAAATTCATGGAGTCAGCCGATGTATGGCGACATATCAGCGCGATTTTTTAGAACATCCTTTCCGGGCATGTTCACCCATGACAGTGATTGGCATCACGATGACTATTTTACAGTTCAAGACTTAAGTGCATCGACCACGGCACCTGCGACGAATGGCAGCAGTCGGACTAGAAGTTTTGACCTCCGCCTGCCGTCGGAAACAACTAGTGTAGTAGCAGATAATTTTATTTCCAGCGGTTTACAAATCTTTTCTCAGAATAGCCAGGATAACATTAGAGGTAACGCAGACATATTACCTTCTACATCAGGCAGAGGCaaaaaaaaaCGGAAGCGAATTTCGCAAGACGATAAATTAAATGTGACCACTTCACTGACGCAAGTTCAACATATTCAAGAAACGAGGGAGCCGGAATCAACTGATTTTGAGCTACCGCAAGCATCAGCAGTACCATCATCGTCCGAATTTTTAGTTGGACCTGTCGTCCTAGGAGATTCTGCGCTTGTACAAAATTTGGGTCAACAAAAGTCGCGCGAAAAGACGTACGAATGCGCACGTTGCTTTGCCAAATATTCCAAATTAAAAGATCGGAATGCTCATATGATTGCAGCTCACAATTATGTACGTCAAAATCGGAAACTTGTTTGTCCCCAAGCGATTATCACTTCAACTATAACAAGCAACGAAGCTGACGTCACCGATTTGACGCCAAGTACCAGTGAGGGTGTCATACTATCAAAATCCCTTCAAATAGAAGATCTACCTGAAGATTCAAAGCATGGCATTGTCAAAATCGAAACAGAACCGCATGCCGCTGATGTAAATCCCGTAAATAATGACTTGGTGACAGAAATGCCAAAAGAACTCGATGATAATAAACAAAATGTGTCCATAGTACCGGTGGAGTCTTCCTACACTGCTACGGAATCTAATGTTACAACGTCAATTGACAAAGAGGAACAAACATCGACGCTAGATATTAAATACCCTGGTTTGCAACGTTTATCTCTTAATGCGCCCACCACTAAGTTGACTACACTCTATCGAATGCTCGTCACGTACAATATGAGCAATTTAAAAATAAAACAGGATCTAACGGAATTAGATGAGAAGCTAATGGAATCGTTGATATTCTATTGTCATGTTTGTCGACAAAGTTTTTCGTCGGTGAAATTTTATGACATTCATTTAACTGAGCATCCTGCTGAATGCTTTTCATGTGGAAAGAAATTTCAAAGATGGAAAAACCTATCATTACATTTAAAACGTCATATGGGTTGGAAAGAGTTTGGTTGTAATGTTTGCGaaaaaaaaTTCGTTGTACGTAGTGCGCTAGTGGAGCACATGCGAATGCATTCTGGTCAATCACCTTTGAAATGTAAAATATGTGGTAAACACTTTAAGCGATATTCGAATTTAACGCAACATCGTAAACGCCATACTAAACAGCAGTTAGTGAGaaaaaaaGAATATGTATGTTATTGCGGTGAAGTGTTGCCATCGAAGGCGAGATTTTTATGGCACAAAGAAACACACGATTCAAAGCCTAAATGCTGCCCACATTGCTGTGATCGTTTCGTTCATGTTAATTCTCTTAAACGACATATACGTCTCGCACATTCGGACAAGTTCGATTACGTTGAACCAATGGAGTGTCCGATATGCAAGCAAGTATTTTCGAAGGCATCAATGAAATCGCATATGGCCACTCATTCGACCGAAAGTCAATATGATTGCACTATATGCAGTAAATCATTCTCAACTAAATGGAACTTGAAAATACATTCGTGGGTGCATGCGAATCGTACCGCTAAACCGTTTAAATGCGAACACTGCCCTAAGGCATTCGTGCGCGAGCTTGATTTCAAGAATCACATCAATTCGCACAAACAAATCCGACCATACACATGCGAAGTTTGTGGATGCAAATTTATAAGGAAATATAACTATATGCGCCATCGTAGGGAACATCATGGGGATAAAAAGTTTACATGTCAAATATGTAAGAAATCGTTTCATCGCCATTACTATCTTATTGAGCACATGCGGATACATACTGGCGAAAGACCCTTCCAATGCACCATTTGTGGTAAAAGTTCCACTACAAAGACGAATCATAATAAACACATGAAAATTCATCATTCTCGCGATCCATTTACAGTGGAAGTATAA
Protein Sequence: MVKNIQCPVCTLYLHAGMNLCDHLETHPKEQVIKALVEMTISGNENRLLTTQLMEETKNIREKERNSAEIANNHSPPIKDHDVSSNCSISASISSLSNQSSNHTHTTLSNAINFGESNATDGCSTFSLTSSKTAIKFNSDSGSDLKNPLAEPPGEASGEFIKQTFNQSSNTNINQVYQSQTTTVLSNVPTDFSIFGSQRYQHAPLPSQPNSGQSSTTGHLHAPTQLVSSQHHVQYQEYTRGSLPQNSPTQLPILRAESISSGTVPYHSQQKQQSPSELPMPMQLNTVSNSQRQPQMYPSHHHQQEQQHQPQPQQQPQQQPQQQQQEQQHHQQQQQQRQQQQQPQQQQQQQPQQQQQSLAQHHHQRQQPQIFPAELPPPPPLQLFAYQSTVPPQYQKPPPAYGTAISQIRSQSKQNKYQQSSTVSQLHHQQQQQQQQQQQLQLQQQTSPVPSSHSLQQSSQHLSLESPSQNQNVQRQLFNFSHIQQQSLNSIAQHLATPSKRQILSLKTETKNGTPTPSPVIRSQHSLPQDKHLADQQTNDSNGSHAKPGGGLYTTSNSSTSAQPSLSTTTSASNAGNSIFGRSPLIPYPILLSSATSTLASSATSVLRYAESPVAHYLERENGDFIVQETPKHVMEYVEEEDGEFSVIERIYQSPPSVLHIHDEDDVDGDVSSKEVLSPKVSGKKSKSFDNEQKSEKVDNSDNEEDFMSISGESDQEEFVASNHPKSKKPDIDSMSKQSDVSLTNETETLSISKITPSTNASSPLSQDSIRKKSPKNTITVLSDVQLNLNEYLDLVGNIIASSKISPQRKTLSAIAPVPLVKIEKEEPLDDDEDQIQENPTDEGTSAKPPLKADKHETEKPTDTSIQPTEEDEKKPDIFECNIESDNSKCGTPYSSNCSGHATSVIRMATTSTSQQMQQTSHVNEGLLEDGLLVKQKEKETVYADKEPKSITIRRDSDRAEDLSKPQPKIQHNLTGFTSDYLRKPFATAIGRKVPKKLVIKPKSSKTEISATNACASSPTGDDQKPSTSAKAQEEYAKLKQRISTDSSNETTPLVQQKDMLFAQLDENYKERNRCNKTADCDKLQLKTSREFDYIDDNEREQLSVAEKFSNLSKTTTIIEKEINKSYASAEKCKRLEELHQHVIMDKRSNERPTATANHSSNLTPTQDDREKRVKKNLELISFREHGEALKQKQRTIIEDIVKVKSEPLSGGNYENQLPETDLNIVDQQLECTSAHTVMECKEEKPCLTETCLPSSTPHLKTESNIADDARVLYDFANSKKVTATETSRKEFLSSSVTFSKQKMQDFPNSSHIGFSSAQSEKENKSEMVVINSSYSSESAVDVNLQNSSFPQSSSVLPFNNAQPNQAQNYIDYPFGFLYNSNNSNNNHVSQQEDIKRSQTFYSNMTHSVSVSNSSNSNLLEDSSTTKQDQSLTSNQQHNQNRNVAEWFNSTDANNTSSVSTAVTSNIEVSFNSPLSVDCNASLDGGDVSKYLDLDACKREQNFDIIDSSRSQNPPQPPPSSPNSCSFAGATDNSLSGVCPVSAALNIRTDEKMPAKGEISEQESNCDIENSWSQPMYGDISARFFRTSFPGMFTHDSDWHHDDYFTVQDLSASTTAPATNGSSRTRSFDLRLPSETTSVVADNFISSGLQIFSQNSQDNIRGNADILPSTSGRGKKKRKRISQDDKLNVTTSLTQVQHIQETREPESTDFELPQASAVPSSSEFLVGPVVLGDSALVQNLGQQKSREKTYECARCFAKYSKLKDRNAHMIAAHNYVRQNRKLVCPQAIITSTITSNEADVTDLTPSTSEGVILSKSLQIEDLPEDSKHGIVKIETEPHAADVNPVNNDLVTEMPKELDDNKQNVSIVPVESSYTATESNVTTSIDKEEQTSTLDIKYPGLQRLSLNAPTTKLTTLYRMLVTYNMSNLKIKQDLTELDEKLMESLIFYCHVCRQSFSSVKFYDIHLTEHPAECFSCGKKFQRWKNLSLHLKRHMGWKEFGCNVCEKKFVVRSALVEHMRMHSGQSPLKCKICGKHFKRYSNLTQHRKRHTKQQLVRKKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLKRHIRLAHSDKFDYVEPMECPICKQVFSKASMKSHMATHSTESQYDCTICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVRELDFKNHINSHKQIRPYTCEVCGCKFIRKYNYMRHRREHHGDKKFTCQICKKSFHRHYYLIEHMRIHTGERPFQCTICGKSSTTKTNHNKHMKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748471;
90% Identity: iTF_00748471;
80% Identity: -