Basic Information

Gene Symbol
CDC5L
Assembly
None
Location
scf7180000643566:42927-46661[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-17 1.9e-14 53.0 1.8 2 46 9 54 8 54 0.97
2 2 1.5e-12 1.2e-09 37.6 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGCGTATTATGATTAAGGGAGGCGTTTGGCGCAACACTGAGGATGAGATCCTCAAGGCTGCCGTGATGAAATATGGGAAAAATCAATGGTCACGCATTGCCTCACTCCTACATCGTAAGAGTGCTAAGCAATGTAAAGCTCGTTGGTATGAATGGCTGGATCCTAGCATTAAGAAGACTGAGTGGTCGCGGGAAGAAGACGAAAAGCTTTTGCATTTGGCTAAAATCATGCCCACGCAATGGCGCACCATAGCACCGATTATAGGGCGCACCGCAGCTCAATGTATAGAACGCTACGAATATTTGCTCGACCAAGCACAGAGGAAGGAAGATGGGGAAGAATGTGTAGTAGATGATCCACGTAAACTTAAGCCGGGTGAAATAGATCCTAATCCGGAAACAAAACCGGCCAGACCAGATCCTAAAGATATGGACGAAGACGAATTGGAGATGTTGTCGGAGGCCCGTGCACGGTTAGCAAACACTCAGGGCAAGAAGGCTAAACGCAAAGCTCGGGAGAAACAGCTGGAAGAAGCTCGCCGATTGGCTGCTTTACAAAAACGTCGTGAGTTAAGGGCTGCCGGAATTGGCAGCGGCAATCGCAAACGGGTTAAAGGTATTGATTACAATGCCGAAATCCCTTTCGAAAAACGACCTGCTTCGGGTTTTTACGATACCTCGGAAGAAAATGTGGAAAAGTTGGAACCTGATTTCAATAAAATGCGTCAACAAGATCTTGATGGAGAACTTAGAGTAGAACGGGAAGAACGTGAACGGAGAAAAGACAAACAAAAACTTAAACAACGGAAAGACAAGGATATGCCCATGGCTATGTTGCAAAATTTAGAGCCAGAACGCAAACGTTCAAAATTAGTGTTACCGCAACCGCAAATTTCCGATCAAGAGCTCCAACAAGTAGTGAAACTGGGTAGAGCTAGTGAAGTGGCTAAAGAGGTAGCAACAGATAGCGGTGTGGAGACAACAGATGCTTTGTTGGCAGATTATTCTATAACACCTCAAGTTGCAGTTACGCCGCGCACGCCAGCACCCTTTACTGATCGCATTATGCAAGAAGCTCAAAACATAATGGCTCTCACCCACGTGGAAACTCCTTTGAAGGGTGGCATTAATACCCCTCTACATGATTCAGATTTCTCTGGAGCTCTACCGAAATCCACAGCTATAGCCACTCCTAATACTGTAATTGCCACACCATTCAGAACTCAACGGGGTAGTGGTTCAGTCACGCCTGGTGGCTTTGCAACACCTATGTCAGCTGTAGTGGTCGCGGGTAAAACTCCAAGAGTCGATGGCTCTCAAACGACAGTCTTGGTTCGTGATAAACTTAACATTAACGTTGAGGAAAATCTGAATGTCGGCGAAACGCCAGCTATGTATAAGAATTATCAAAAGCAATTAAAGCATTCCTTGCGTGAAAGCTTGGCCACCTTGCCAACTCCAAAAAATGATTATGAGATCGTAGTACCCGAAGAAAATGAACTTGAACCCACAGATTCAACAAATGAATCCATCACTGTTGAAGATCAGGCTGATGTAGATGCTCGCGTTGTAGCTGaaaaagaaaaaaCACGTAAACAAGAATTGGAGAAGCGTTCCCAAGTAGTTCAAAGGACGCTACCGCGCCCAACCGAAGTAAACACCAAGATTCTTAGACCACTTTCCGACAAACCAAATTTAACAGAATTACAAAATGCAGAGGAAATGATCAAACACGAAATGATTACTATGTTGTTATATGATTCCACAAAGGATCCAGTTCCCGGTCAATCAGAAAATAAAATGGACCAATTGCAAACATATTTCAAGTCGAATCCTTATGAAGAGATATCGAAAGAGGAACTGAAATAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKIMPTQWRTIAPIIGRTAAQCIERYEYLLDQAQRKEDGEECVVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIGSGNRKRVKGIDYNAEIPFEKRPASGFYDTSEENVEKLEPDFNKMRQQDLDGELRVEREERERRKDKQKLKQRKDKDMPMAMLQNLEPERKRSKLVLPQPQISDQELQQVVKLGRASEVAKEVATDSGVETTDALLADYSITPQVAVTPRTPAPFTDRIMQEAQNIMALTHVETPLKGGINTPLHDSDFSGALPKSTAIATPNTVIATPFRTQRGSGSVTPGGFATPMSAVVVAGKTPRVDGSQTTVLVRDKLNINVEENLNVGETPAMYKNYQKQLKHSLRESLATLPTPKNDYEIVVPEENELEPTDSTNESITVEDQADVDARVVAEKEKTRKQELEKRSQVVQRTLPRPTEVNTKILRPLSDKPNLTELQNAEEMIKHEMITMLLYDSTKDPVPGQSENKMDQLQTYFKSNPYEEISKEELK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00747396;
90% Identity
iTF_00747396;
80% Identity
-