Gmor008074.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- lola
- Assembly
- None
- Location
- scf7180000651771:378891-387445[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-09 2.7e-06 26.5 0.0 4 45 415 456 412 456 0.88
Sequence Information
- Coding Sequence
- ATGGAGGGCCCGCCACCCGGACCACCTTTGGGCGAACCGCAAACTTATTGTCTGCGTTGGAATCTGCATCAATCGAATTTGGTAGATATACTAGATGTCCTCTACAAAAGGGAGAATTATGTCGACTGCACGATAATTGTTGATGATAATGAAAAATTTAAAGCTCATCGTGTCGTACTGGCAGCCAATTCACCCTATTTTCATAGTATACTACAGGATGTCCCAGGCGAACATTGTAGCATAATATTTCCGGGAGTGAAAAAATATGAAATGGAAGCCTTACTTGAGTATATGTATACGGGTGAGGTGGATGTAACGCAAAGCCTAATACCGAGAATAATGCGTATTGCCGAAGAACTGAAGGTGAAGGGACTTTTTGATATGGCCGATCTTAAAGAGAAATTTAGTAAGGCCAGCGGAGAATGCAATGAAAGGGCGGCTGATCGTTGCACACGACCAATAAGTCCGGACGTCCTATACCGGTCGCCGGCTTCAACATCATCCAATTGTGCTCAAATTCCTCGAATAACAAAAGATACCGATAGCTTGGATCATCACGAGACGTCATTAATATCTACCTCTTCGAATATTTCACCGAGCAGTACGCAAAACTTTGGTTTAATTGCGTCAACTCCAGGTGGTCAATGGACTATGTCGCCTTCATCGGCCGCAGCTGCCATGATCAATTCGGTGTACGATGCAGGCAACGATATAAGTTCGTTAAAACATGCGGCGGAGATGTCCGCCTTCCCCCATATTGTAAATGGCGAAGACACTCCCATATTGCGTAATGTTTTAGGCCACACTAATCCAGCCGATTCATCGCAATCCTTGCCTTTAGTTCTGCCTAGCACCTCTGCCTCGGCGGCGGCAACAGCGGCATCGACGAAAGGAGATGTGAGCTCATCAGCGCATATGGTAGGTCAAAGTAGTCATGGTTTTAGTTTAAACGGTTCTGATTACAGCGGGAATCGGGTAAGTGCCTCCATGATTATCTATATGAAATTTTTTAACAAAGTATTAAGAAATTTAAAAAACCTGATGCAGCAACCTGATCGTCATTCGCAGCTTCCGCAGCAACAACATGATGAACAGCATTCGCCTATGACCGATCGCTCCTTTGACGATGAGGGAACGTTCGCAAATAGAAGCAGCAGCAGTAGTTACGATAGCAATGTTAACAGCGCACAGACGGGAAATCAGAAACCGGAATGGAAGCGCTACAAACAATATACTCGCAATGACATTATGTCGGCTATACAGTGTGTGAAGCAGGGTATGACCGCTTTGCAAGCGTCGAAAAAATTTGGTGTACCCTCGCGAACACTGTACGATAAAGTaaaaaaaCTAGGCATAACCACAGGTCGTCCAATCAATCGCAGTTTGAAGCGAAGTCCAACCAATATGGAATCCTCGGCAGCTTTCCCCTATGCTCATACTTATGGCCAAGCGTCAACGTCGGTAGCAATGGCAGCCGCAGCCGCTATGCATGACGTTAATCGCGAAAACAGTgagctaaaagagctaaaagagcAGTTACAGCGCCCCAGTGAACCCCACCATTTGCCACAAGCGATGTCTCATCCAACTCTATTGGATCGCGCCTTCTTACAGCAAGCATTAGAAAGTAGGGGCGGAGGCGATATAGCCGGCCGAGAAGCTTTACATGCAATGGCCTTAGCAGCAGTAGCTCAAGCCGCTGCCAATCATATATCAACAAATCCAGGAGCAAACGGCAATGCCGCTCGTTCTCCTAGCCCAGCCACATTTCCTTTAATCAAGTACTGTAACGCGATGCATATAGACGAACATGAAGGCTTAGAACGTACCGGCAGCGGTAACAGTCTTGAAAGGCATCAACAAATCATGGAAATTGACGACGACAATCGTGCACAGGATCTAACAATCAATCGAAAAACGATTAAGTCACCTTTAGCCGTAGAACAAAGAGAACAACGGCCACTGTCGACTAACATATTGCCAACAATGTCGCAACCTCGCAGCTCGCACGAGGCGGAAAGGACTGTTATAATAAACTCTAAGTTGCCATTAAATCTTAGCGATGAATTTATTCCCGAGTCCGCAATGAAGAGGGAAGTTGTCGATGATGTACGAGGTGATTGA
- Protein Sequence
- MEGPPPGPPLGEPQTYCLRWNLHQSNLVDILDVLYKRENYVDCTIIVDDNEKFKAHRVVLAANSPYFHSILQDVPGEHCSIIFPGVKKYEMEALLEYMYTGEVDVTQSLIPRIMRIAEELKVKGLFDMADLKEKFSKASGECNERAADRCTRPISPDVLYRSPASTSSNCAQIPRITKDTDSLDHHETSLISTSSNISPSSTQNFGLIASTPGGQWTMSPSSAAAAMINSVYDAGNDISSLKHAAEMSAFPHIVNGEDTPILRNVLGHTNPADSSQSLPLVLPSTSASAAATAASTKGDVSSSAHMVGQSSHGFSLNGSDYSGNRVSASMIIYMKFFNKVLRNLKNLMQQPDRHSQLPQQQHDEQHSPMTDRSFDDEGTFANRSSSSSYDSNVNSAQTGNQKPEWKRYKQYTRNDIMSAIQCVKQGMTALQASKKFGVPSRTLYDKVKKLGITTGRPINRSLKRSPTNMESSAAFPYAHTYGQASTSVAMAAAAAMHDVNRENSELKELKEQLQRPSEPHHLPQAMSHPTLLDRAFLQQALESRGGGDIAGREALHAMALAAVAQAAANHISTNPGANGNAARSPSPATFPLIKYCNAMHIDEHEGLERTGSGNSLERHQQIMEIDDDNRAQDLTINRKTIKSPLAVEQREQRPLSTNILPTMSQPRSSHEAERTVIINSKLPLNLSDEFIPESAMKREVVDDVRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00748147;
- 90% Identity
- iTF_00748147;
- 80% Identity
- iTF_00749075;