Gmor005390.1
Basic Information
- Insect
- Glossina morsitans
- Gene Symbol
- bab1
- Assembly
- None
- Location
- scf7180000652160:1519618-1579344[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 3.3e-14 51.8 0.0 1 43 626 669 626 671 0.95 2 2 7.5 1e+04 -4.2 2.7 3 24 763 787 761 788 0.69
Sequence Information
- Coding Sequence
- atgtcttCTAATAATCCTTTACAAACACTTCCGGAGACTGGGAAAAAAGGAAAATCACCATCTATAAGTAATTTAATGGATACTACCACCGATAATAAACAACCCTCGCGACCGTCGTCCGTGATACCAGGTATTTTGGCATCATTGGATTCAAACTCAACCAGCCCTCCCATAACACATGTAACGAAGCTCGAAAGCAACACGCTAAGATCAAGAAATGAGCATATAGTCGAAGTTAGTTCAGTCTCTGAAACCCCTTCACATGTCCCTACTCCTCATTCATCTAGTCCAGTATGTGAGGTACCATCGTCTTCACCGCATTCGGAACAATCTTCGAGTGGTTCTGCTTCAGCCAGTGCTCCGCAGCAGTTTTGCTTACGTTGGAACAATTATCAAAGCAATCTAACGAGTGTGTTTGACCAGCTATTGCAGACAGAATCTTTTGTAGATGTAACGCTCGCTTGTGATGGACATTCAATAAAAGCTCATAAAATGGTTCTGTCTGCATGCTCTCCATACTTTCAAAACCTATTCTTCGACACACCATGTCAGCATCCAATTGTTATTATGCGAGATGTCGGCTGGTGCGAACTAAAGGCCATTGTAGATTTTATGTACAAGGGCGAAATAAATGTAAGTCAGGAACAAATTGGTCCACTACTAAGAATAGCAGAAATGTTAAAGGTACGAGGATTGGCTGATGTCGGAAATATAGAGAGTTCTACCTCCGATGCACGTCCAAATGAATTGCTCGAGAAACACGATCCTTCGCCGCAAAATTTGGTATCACCAAAAATTCCCCAACATTTATCGCCTATTACTAGCAGGGAACAGAGCCTTTATCAAAGTCCCGATAGTGGACGAGCTGAGCAAGTACAGAGTTTTTTATCCTTCACGGAGCCGAATAAAAAACTCCGTTTAGAAAAGTCGGCTTGGGATATTAATAGCAGCAGCAGTGGAAATCATCCGAATAGTTCAAGCATAGAGCTTCGTTTGTCTCCTTTGCCTCATGGATCACTCGTCACTAGGAATGTGAGAAAGCGCAGGTGGCCTTCAGCCGATGCATTGTTAAACCCACCGTCGAGTCCACTTAGTGGTTTAATAGCTGCAGAGCGAGCCGAACAAGAGCAAGAGCGAGAACGACAGAGAGAACACATACTTATTACTCCCCCCATAGCCATAACCTCTAGTACTACTAACAGCGCAACACATTTAACGTCATCTAGTTTAGCATCTAATGTTCAAATAGAAATTCCATCATCATCATTAACTCTGCTTCCGCCAGCCCGTACGCCGTCAGGACTATTAACGCCAAGCCCACACCTGCAAATATCACAGCATCAATCACAGTTACAACAACATCACAGTTCCGGTCAACATTCGCAGCGAGCGTCCCCTGCCTCATCTGTCGCTTCCACACAACCATCAAGCGTTTTAAGTGGGCCCTTGACACCGTCCCCAGCAAATATTACCTCCAGTAATTCGGGCGAGTCCCACCATCGATTTTCAATGGGATCAGTGCAGGCAGCAGCGATGgcagctgcagctgcagctgcTCATATTGATCTAACCCCAGCTGCAGCAATGGGAATTGGTGGGCTTCCTTCCGCAACAATGCCGATTGGCTCAGGTCCAACGCACCATCCATCCTCGATAGCAGATGACTTAGAAATCAAACCCGGAATAGCCGAAATGATACGTGAAGAAGAGCGGGCAAAAATGTTAGAAAGTTCACACGCTTGGATGAGTTCCGGAGCTTCTATTGCAGACAGCTACCAGTATCAACTGCAGTCGATGTGGCAAAAATGCTGGAATACAAACCAAAGTCTAATGCATCACTTGCGTTTTCGCGAGCGAGGTCCATTAAAGTCTTGGCGTCCCGAAACGATGGCAGAAGCAATTTTTAGCGTTTTAAAAGAAGGCCTATCACTATCTCAAGCAGCACGCAAATACGACATCCCGTATCCAACTTTCGTTTTATACGCGAACCGGGTTCATAACATGTTAGGTCCTTCAATTGACGGTGGCCCTGATCTTAGGCCGAAAGGAAGAGGGCGTCCTCAACGTATCCTACTTGGCATTTGGCCAGATGAACATATTAAAGGAGTTATTAAAACAGTTGTTTTTCGCGACGCTAAGGATCTTAAGGAAGAAACCTTTGCACACCTCTCCTATGGTCGCCATTCGCCAGTCTTTTCCTTTCAAGAAAGTACACTAAACTATGGCGGTCCAAGCAGTCAATGTGCGAACGGTATGCCTGCACCTGCAAGTGATCAAATGTCGCAAGAAGCTACGGCAGCAGCTGTGGCGGCTGTTGCTCATAACTTTCGGCAACAAATGCAAATGGCTGCTGCGGCGCAACATCAGCAACACTCTGAAAACATTGGAGCTGCAAGTCTATTTAACCTACCACCGCATTTGGTATCTGCCGCAGGACCAGCCGGTGCGGGACCCATTGTTGGCGCACCAGGTCCTGGTAGTATTGTTCTACCGAAACCAAGTATTTCGCCAGCCCTAAGTACCACGTCGAATTCCGGTGGTGGCAGTGCAGTGGTGGGACCGCGGCACGCTCCCTCGCCATGTGGACCCACATTACCAGGGATGCATCAGTTGCCACCAGGGATGGCTGTAGCTTTGCATATGGTCGGTGGCACAGGACGATGTGAAACCGCAACGATGCTAAATcagcagcaacatcaacatcaacttcagcagttacatatgcaacaacaacatgctattcatcaacagcaacagcagcagcaaaaacatcatcagcaaatgattttcggtgcAAGTTCCATTAGTCATCCATCTATTTCCACTGCAACAACTGCAGCGCCAGCTTCCTCGCAGCATTCAATTTCTACAACAATTAGTGCGCCACAAACTAAATTTTCGTCTTCTTCGATATCTCCATCTCTAGAACGACAACGTCAAAGTACGCCAGGAAACACAGCACTTCGTTCTTCTCTTACGGACCTGGCCCTTGATTTTGGTTATAGTAAAAGTACGCAGTCTTTCTCACCATCCCGTCTATTTCCCGACGATTTAGCCGATCTGGTCGGTACATCGCCTTCATCATCCACCTCAAAGAAACCATCAACTTTAGCTGATACAAGTTCGACAATTACTGTCACAAAATCGAACACTCCATCTGAAATTTTAACTTCCGTCGCATGCACATCAACTACAACTTCTACAACTAGCAATAAAAGTTCCAGTAATAGTGTGAAATTAGAACCGATAACTACAAGTAGCGAATAA
- Protein Sequence
- MSSNNPLQTLPETGKKGKSPSISNLMDTTTDNKQPSRPSSVIPGILASLDSNSTSPPITHVTKLESNTLRSRNEHIVEVSSVSETPSHVPTPHSSSPVCEVPSSSPHSEQSSSGSASASAPQQFCLRWNNYQSNLTSVFDQLLQTESFVDVTLACDGHSIKAHKMVLSACSPYFQNLFFDTPCQHPIVIMRDVGWCELKAIVDFMYKGEINVSQEQIGPLLRIAEMLKVRGLADVGNIESSTSDARPNELLEKHDPSPQNLVSPKIPQHLSPITSREQSLYQSPDSGRAEQVQSFLSFTEPNKKLRLEKSAWDINSSSSGNHPNSSSIELRLSPLPHGSLVTRNVRKRRWPSADALLNPPSSPLSGLIAAERAEQEQERERQREHILITPPIAITSSTTNSATHLTSSSLASNVQIEIPSSSLTLLPPARTPSGLLTPSPHLQISQHQSQLQQHHSSGQHSQRASPASSVASTQPSSVLSGPLTPSPANITSSNSGESHHRFSMGSVQAAAMAAAAAAAHIDLTPAAAMGIGGLPSATMPIGSGPTHHPSSIADDLEIKPGIAEMIREEERAKMLESSHAWMSSGASIADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKEETFAHLSYGRHSPVFSFQESTLNYGGPSSQCANGMPAPASDQMSQEATAAAVAAVAHNFRQQMQMAAAAQHQQHSENIGAASLFNLPPHLVSAAGPAGAGPIVGAPGPGSIVLPKPSISPALSTTSNSGGGSAVVGPRHAPSPCGPTLPGMHQLPPGMAVALHMVGGTGRCETATMLNQQQHQHQLQQLHMQQQHAIHQQQQQQQKHHQQMIFGASSISHPSISTATTAAPASSQHSISTTISAPQTKFSSSSISPSLERQRQSTPGNTALRSSLTDLALDFGYSKSTQSFSPSRLFPDDLADLVGTSPSSSTSKKPSTLADTSSTITVTKSNTPSEILTSVACTSTTTSTTSNKSSSNSVKLEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00749051;
- 90% Identity
- iTF_00749051;
- 80% Identity
- iTF_00749051;